Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91788095

Identifier: 91788095

GI number: 91788095

Start: 2316292

End: 2316762

Strand: Reverse

Name: 91788095

Synonym: Bpro_2222

Alternate gene names: NA

Gene position: 2316762-2316292 (Counterclockwise)

Preceding gene: 91788096

Following gene: 91788094

Centisome position: 44.55

GC content: 55.84

Gene sequence:

>471_bases
ATGCGCGCGCCGACATGCGGGTTCAGCGAGAACCTTTTGGAAAATAGCATGCAAAAAATACTTATTCCTTTTGATGGCTC
TCCCAATGCATTGCGCGCAGTGCGCTATGCAGCCACAGCGGTGCAAGAAAAATCCACCCTGGAACTTGAACTGCTGCACG
TGCTTGATCCCATGTCACTCAGATCCCACGCCACCTTGACCAACATAGAGGTCAATGACCTGTATGCGAGTGAGGCGGAT
CAGGTGCTTCAGCCGGCACGACAGATTCTCGACCAAGCTGGTATTCCCTATCAGGCACACTACCGCGTTGGCGCGGCCGC
CAGCGAAATCGCAGCGCAAGTGCGTGAAACACGCTGTGATGGGGTAGTCATGGGGACACGCGGCATGGGACCGATCGCCA
ACGTCATGATCGGCTCTGTCGCCACTCGCGTCGTGCACTTGGTCGAGGTGCCAGTTATCCTGATCAAGTAG

Upstream 100 bases:

>100_bases
TTGGCCTCAGTATGAATTGATTTGATCTGCACCAAATAGAGAACTTGCACGGTCGCAGTATCCTTCGCAGGAACAGCTTG
GCAATGGTGCGGCTTGTGCG

Downstream 100 bases:

>100_bases
GTGCCTTGCTTCATCAGAAGCATATTGCGCAACCTTACTGATCGCCGCGTCCACAATCGGTGGACCAGATTTCCTTGGCT
GAGGAGCCTCTTGTGCAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: USP MJ0531 [H]

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MRAPTCGFSENLLENSMQKILIPFDGSPNALRAVRYAATAVQEKSTLELELLHVLDPMSLRSHATLTNIEVNDLYASEAD
QVLQPARQILDQAGIPYQAHYRVGAAASEIAAQVRETRCDGVVMGTRGMGPIANVMIGSVATRVVHLVEVPVILIK

Sequences:

>Translated_156_residues
MRAPTCGFSENLLENSMQKILIPFDGSPNALRAVRYAATAVQEKSTLELELLHVLDPMSLRSHATLTNIEVNDLYASEAD
QVLQPARQILDQAGIPYQAHYRVGAAASEIAAQVRETRCDGVVMGTRGMGPIANVMIGSVATRVVHLVEVPVILIK
>Mature_156_residues
MRAPTCGFSENLLENSMQKILIPFDGSPNALRAVRYAATAVQEKSTLELELLHVLDPMSLRSHATLTNIEVNDLYASEAD
QVLQPARQILDQAGIPYQAHYRVGAAASEIAAQVRETRCDGVVMGTRGMGPIANVMIGSVATRVVHLVEVPVILIK

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 16907; Mature: 16907

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAPTCGFSENLLENSMQKILIPFDGSPNALRAVRYAATAVQEKSTLELELLHVLDPMSL
CCCCCCCCHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCC
RSHATLTNIEVNDLYASEADQVLQPARQILDQAGIPYQAHYRVGAAASEIAAQVRETRCD
CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCC
GVVMGTRGMGPIANVMIGSVATRVVHLVEVPVILIK
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEC
>Mature Secondary Structure
MRAPTCGFSENLLENSMQKILIPFDGSPNALRAVRYAATAVQEKSTLELELLHVLDPMSL
CCCCCCCCHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCC
RSHATLTNIEVNDLYASEADQVLQPARQILDQAGIPYQAHYRVGAAASEIAAQVRETRCD
CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCC
GVVMGTRGMGPIANVMIGSVATRVVHLVEVPVILIK
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]