Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91788076

Identifier: 91788076

GI number: 91788076

Start: 2299528

End: 2300937

Strand: Direct

Name: 91788076

Synonym: Bpro_2203

Alternate gene names: NA

Gene position: 2299528-2300937 (Clockwise)

Preceding gene: 91788074

Following gene: 91788077

Centisome position: 44.22

GC content: 66.38

Gene sequence:

>1410_bases
ATGGACGAACTGCAAGAGTTTGATCGCTACATGGCGCATCTGAGCGAAGGTCTGGGCCATGCGGACCGGCACGCCGGACT
GCGTGGGTACTGCACCGGCCTGATGTCGCCGCTGCAGCGCAAGAGCGTCGAGCCGATGGCCGCGCACATGGACCCGCTGA
AGGTGCGCTCGCGGCACCAGTCGCTGCATCACTTCGTGGCCGATGCGAACTGGTCGGATGGGCAGATGCTGCTGCGTGTG
TGCCAATGGGTGGTGCCGCTGATGGACCTCAAGGACGGCGGCTGGTGGATCATCGACGACACGGGTTTCCCCAAGCAGGG
CCGGCACTCGGTGGGCGTGGCACGCCAGTACTGCGGGATGCTGGGTAAGCAGGACAATTGCCAGGTGGCCGTGAGCGTGT
CGCTGGCGTGCGAGGCGGCCAGCGTGCCGGTAGCGTGGCAGTTGTACCTGCCGCGCGAGTGGGCCGACGACCCGGCGCGC
CGCGACAAGGCCGGCGTCCCCGAGGCACTGCAGTTCGCGACCAAGCCGCAGATCGCATTGCAGCAGATCGAGCATTTGAT
GGGTCAGGGTGCGCCCCGACACTGTGTTCTGGCCGATGCCGGCTACGGCGTGGACACGGCATTTCGCGCACGCCTGAGTG
AGTTGGGCCTGCGCTATGCGGTGGGCGTCACCGGCAGCGTCACGGTCTGGCCGCCCGGGCGCGAGCCCTTGCCGCCGGCG
GCCTACGGGGGGCGCGGGCGCCTGGCCAAGCGACTGCGCCTGGGCGGCACCGCTTTGCCGCAACACCATCCGCAATCGAT
CAAGGAACTCGCCCTGGAACTTGGAGCCAAGCATTGGCACACCGTCACCTGGCGCGAAGGAACGAACGCCAGGCTGCGTT
CGCGCTTCGCCCGCGTGCGGGTGCGCGCAGCGCACCGGGACAACCTGCGCGAGGAATTGCGCGAACCCGAGTGGCTGCTC
ATCGAGTGGCCCAAGGGTGATGCAGAGCCGCTCAAGTACTGGCTGTCCACACTGCCCGAGGACACACCGCTGGCGCGCAT
GGTGTTTGAAGCCAAGATGCGTTGGCGTATCGAGCGCGACTACCAAGACCTCAAGCAGGATCTCGGCCTGGGCCACTACG
AGGGGCGGGGCTGGCGGGGCTTTCATCATCACGCCAGCCTGAGCATCGCCGCCTACGGTTTCTTGCTCGCTCAGCGGTTG
ACCCACCCCGATGAAGCCGGGGGTAAAAAAAACGGCGCAAAACGCCAAGAGTCTGCCCTACCCACGCATTACAAGCCTCG
GGGAAGCCCAGCGCACGCAGCGCCACGTCCCATCCTCGATCACCACCTTGCGGCTGCGCATCGGCGCGCTACTGGCTCGC
AGTCTGCCTCGATGCCCTTGTTGCCTTCGAGTTCGGGACGGACCAATTAA

Upstream 100 bases:

>100_bases
CACCGTATTCCTTTTTACACACGGAACGTCAATGCCTTATTCTTACTGTGTTATAAATCAAGGCATTATCTGCACATCTT
CAACTGAAAGGTGAGCCTTG

Downstream 100 bases:

>100_bases
CTAACACAGTAAGATTATCGCCCTGTCATGAAATCCCGAAATCAGTGTCCCGGCTGCCTGTCGGATTCGCTGTCTGTCGT
TTACGAAGAGTCGTATGGCG

Product: ISRSO17-transposase protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MDELQEFDRYMAHLSEGLGHADRHAGLRGYCTGLMSPLQRKSVEPMAAHMDPLKVRSRHQSLHHFVADANWSDGQMLLRV
CQWVVPLMDLKDGGWWIIDDTGFPKQGRHSVGVARQYCGMLGKQDNCQVAVSVSLACEAASVPVAWQLYLPREWADDPAR
RDKAGVPEALQFATKPQIALQQIEHLMGQGAPRHCVLADAGYGVDTAFRARLSELGLRYAVGVTGSVTVWPPGREPLPPA
AYGGRGRLAKRLRLGGTALPQHHPQSIKELALELGAKHWHTVTWREGTNARLRSRFARVRVRAAHRDNLREELREPEWLL
IEWPKGDAEPLKYWLSTLPEDTPLARMVFEAKMRWRIERDYQDLKQDLGLGHYEGRGWRGFHHHASLSIAAYGFLLAQRL
THPDEAGGKKNGAKRQESALPTHYKPRGSPAHAAPRPILDHHLAAAHRRATGSQSASMPLLPSSSGRTN

Sequences:

>Translated_469_residues
MDELQEFDRYMAHLSEGLGHADRHAGLRGYCTGLMSPLQRKSVEPMAAHMDPLKVRSRHQSLHHFVADANWSDGQMLLRV
CQWVVPLMDLKDGGWWIIDDTGFPKQGRHSVGVARQYCGMLGKQDNCQVAVSVSLACEAASVPVAWQLYLPREWADDPAR
RDKAGVPEALQFATKPQIALQQIEHLMGQGAPRHCVLADAGYGVDTAFRARLSELGLRYAVGVTGSVTVWPPGREPLPPA
AYGGRGRLAKRLRLGGTALPQHHPQSIKELALELGAKHWHTVTWREGTNARLRSRFARVRVRAAHRDNLREELREPEWLL
IEWPKGDAEPLKYWLSTLPEDTPLARMVFEAKMRWRIERDYQDLKQDLGLGHYEGRGWRGFHHHASLSIAAYGFLLAQRL
THPDEAGGKKNGAKRQESALPTHYKPRGSPAHAAPRPILDHHLAAAHRRATGSQSASMPLLPSSSGRTN
>Mature_469_residues
MDELQEFDRYMAHLSEGLGHADRHAGLRGYCTGLMSPLQRKSVEPMAAHMDPLKVRSRHQSLHHFVADANWSDGQMLLRV
CQWVVPLMDLKDGGWWIIDDTGFPKQGRHSVGVARQYCGMLGKQDNCQVAVSVSLACEAASVPVAWQLYLPREWADDPAR
RDKAGVPEALQFATKPQIALQQIEHLMGQGAPRHCVLADAGYGVDTAFRARLSELGLRYAVGVTGSVTVWPPGREPLPPA
AYGGRGRLAKRLRLGGTALPQHHPQSIKELALELGAKHWHTVTWREGTNARLRSRFARVRVRAAHRDNLREELREPEWLL
IEWPKGDAEPLKYWLSTLPEDTPLARMVFEAKMRWRIERDYQDLKQDLGLGHYEGRGWRGFHHHASLSIAAYGFLLAQRL
THPDEAGGKKNGAKRQESALPTHYKPRGSPAHAAPRPILDHHLAAAHRRATGSQSASMPLLPSSSGRTN

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG5659

COG function: function code L; FOG: Transposase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012337 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52453; Mature: 52453

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDELQEFDRYMAHLSEGLGHADRHAGLRGYCTGLMSPLQRKSVEPMAAHMDPLKVRSRHQ
CCHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHH
SLHHFVADANWSDGQMLLRVCQWVVPLMDLKDGGWWIIDDTGFPKQGRHSVGVARQYCGM
HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHH
LGKQDNCQVAVSVSLACEAASVPVAWQLYLPREWADDPARRDKAGVPEALQFATKPQIAL
CCCCCCCEEEEEEEEEECCCCCCEEEEEEECHHCCCCCHHHCCCCCCHHHHHHCCHHHHH
QQIEHLMGQGAPRHCVLADAGYGVDTAFRARLSELGLRYAVGVTGSVTVWPPGREPLPPA
HHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCC
AYGGRGRLAKRLRLGGTALPQHHPQSIKELALELGAKHWHTVTWREGTNARLRSRFARVR
CCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHH
VRAAHRDNLREELREPEWLLIEWPKGDAEPLKYWLSTLPEDTPLARMVFEAKMRWRIERD
HHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
YQDLKQDLGLGHYEGRGWRGFHHHASLSIAAYGFLLAQRLTHPDEAGGKKNGAKRQESAL
HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCC
PTHYKPRGSPAHAAPRPILDHHLAAAHRRATGSQSASMPLLPSSSGRTN
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDELQEFDRYMAHLSEGLGHADRHAGLRGYCTGLMSPLQRKSVEPMAAHMDPLKVRSRHQ
CCHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHH
SLHHFVADANWSDGQMLLRVCQWVVPLMDLKDGGWWIIDDTGFPKQGRHSVGVARQYCGM
HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHH
LGKQDNCQVAVSVSLACEAASVPVAWQLYLPREWADDPARRDKAGVPEALQFATKPQIAL
CCCCCCCEEEEEEEEEECCCCCCEEEEEEECHHCCCCCHHHCCCCCCHHHHHHCCHHHHH
QQIEHLMGQGAPRHCVLADAGYGVDTAFRARLSELGLRYAVGVTGSVTVWPPGREPLPPA
HHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCC
AYGGRGRLAKRLRLGGTALPQHHPQSIKELALELGAKHWHTVTWREGTNARLRSRFARVR
CCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHH
VRAAHRDNLREELREPEWLLIEWPKGDAEPLKYWLSTLPEDTPLARMVFEAKMRWRIERD
HHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
YQDLKQDLGLGHYEGRGWRGFHHHASLSIAAYGFLLAQRLTHPDEAGGKKNGAKRQESAL
HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCC
PTHYKPRGSPAHAAPRPILDHHLAAAHRRATGSQSASMPLLPSSSGRTN
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1662761 [H]