| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91788076
Identifier: 91788076
GI number: 91788076
Start: 2299528
End: 2300937
Strand: Direct
Name: 91788076
Synonym: Bpro_2203
Alternate gene names: NA
Gene position: 2299528-2300937 (Clockwise)
Preceding gene: 91788074
Following gene: 91788077
Centisome position: 44.22
GC content: 66.38
Gene sequence:
>1410_bases ATGGACGAACTGCAAGAGTTTGATCGCTACATGGCGCATCTGAGCGAAGGTCTGGGCCATGCGGACCGGCACGCCGGACT GCGTGGGTACTGCACCGGCCTGATGTCGCCGCTGCAGCGCAAGAGCGTCGAGCCGATGGCCGCGCACATGGACCCGCTGA AGGTGCGCTCGCGGCACCAGTCGCTGCATCACTTCGTGGCCGATGCGAACTGGTCGGATGGGCAGATGCTGCTGCGTGTG TGCCAATGGGTGGTGCCGCTGATGGACCTCAAGGACGGCGGCTGGTGGATCATCGACGACACGGGTTTCCCCAAGCAGGG CCGGCACTCGGTGGGCGTGGCACGCCAGTACTGCGGGATGCTGGGTAAGCAGGACAATTGCCAGGTGGCCGTGAGCGTGT CGCTGGCGTGCGAGGCGGCCAGCGTGCCGGTAGCGTGGCAGTTGTACCTGCCGCGCGAGTGGGCCGACGACCCGGCGCGC CGCGACAAGGCCGGCGTCCCCGAGGCACTGCAGTTCGCGACCAAGCCGCAGATCGCATTGCAGCAGATCGAGCATTTGAT GGGTCAGGGTGCGCCCCGACACTGTGTTCTGGCCGATGCCGGCTACGGCGTGGACACGGCATTTCGCGCACGCCTGAGTG AGTTGGGCCTGCGCTATGCGGTGGGCGTCACCGGCAGCGTCACGGTCTGGCCGCCCGGGCGCGAGCCCTTGCCGCCGGCG GCCTACGGGGGGCGCGGGCGCCTGGCCAAGCGACTGCGCCTGGGCGGCACCGCTTTGCCGCAACACCATCCGCAATCGAT CAAGGAACTCGCCCTGGAACTTGGAGCCAAGCATTGGCACACCGTCACCTGGCGCGAAGGAACGAACGCCAGGCTGCGTT CGCGCTTCGCCCGCGTGCGGGTGCGCGCAGCGCACCGGGACAACCTGCGCGAGGAATTGCGCGAACCCGAGTGGCTGCTC ATCGAGTGGCCCAAGGGTGATGCAGAGCCGCTCAAGTACTGGCTGTCCACACTGCCCGAGGACACACCGCTGGCGCGCAT GGTGTTTGAAGCCAAGATGCGTTGGCGTATCGAGCGCGACTACCAAGACCTCAAGCAGGATCTCGGCCTGGGCCACTACG AGGGGCGGGGCTGGCGGGGCTTTCATCATCACGCCAGCCTGAGCATCGCCGCCTACGGTTTCTTGCTCGCTCAGCGGTTG ACCCACCCCGATGAAGCCGGGGGTAAAAAAAACGGCGCAAAACGCCAAGAGTCTGCCCTACCCACGCATTACAAGCCTCG GGGAAGCCCAGCGCACGCAGCGCCACGTCCCATCCTCGATCACCACCTTGCGGCTGCGCATCGGCGCGCTACTGGCTCGC AGTCTGCCTCGATGCCCTTGTTGCCTTCGAGTTCGGGACGGACCAATTAA
Upstream 100 bases:
>100_bases CACCGTATTCCTTTTTACACACGGAACGTCAATGCCTTATTCTTACTGTGTTATAAATCAAGGCATTATCTGCACATCTT CAACTGAAAGGTGAGCCTTG
Downstream 100 bases:
>100_bases CTAACACAGTAAGATTATCGCCCTGTCATGAAATCCCGAAATCAGTGTCCCGGCTGCCTGTCGGATTCGCTGTCTGTCGT TTACGAAGAGTCGTATGGCG
Product: ISRSO17-transposase protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 469; Mature: 469
Protein sequence:
>469_residues MDELQEFDRYMAHLSEGLGHADRHAGLRGYCTGLMSPLQRKSVEPMAAHMDPLKVRSRHQSLHHFVADANWSDGQMLLRV CQWVVPLMDLKDGGWWIIDDTGFPKQGRHSVGVARQYCGMLGKQDNCQVAVSVSLACEAASVPVAWQLYLPREWADDPAR RDKAGVPEALQFATKPQIALQQIEHLMGQGAPRHCVLADAGYGVDTAFRARLSELGLRYAVGVTGSVTVWPPGREPLPPA AYGGRGRLAKRLRLGGTALPQHHPQSIKELALELGAKHWHTVTWREGTNARLRSRFARVRVRAAHRDNLREELREPEWLL IEWPKGDAEPLKYWLSTLPEDTPLARMVFEAKMRWRIERDYQDLKQDLGLGHYEGRGWRGFHHHASLSIAAYGFLLAQRL THPDEAGGKKNGAKRQESALPTHYKPRGSPAHAAPRPILDHHLAAAHRRATGSQSASMPLLPSSSGRTN
Sequences:
>Translated_469_residues MDELQEFDRYMAHLSEGLGHADRHAGLRGYCTGLMSPLQRKSVEPMAAHMDPLKVRSRHQSLHHFVADANWSDGQMLLRV CQWVVPLMDLKDGGWWIIDDTGFPKQGRHSVGVARQYCGMLGKQDNCQVAVSVSLACEAASVPVAWQLYLPREWADDPAR RDKAGVPEALQFATKPQIALQQIEHLMGQGAPRHCVLADAGYGVDTAFRARLSELGLRYAVGVTGSVTVWPPGREPLPPA AYGGRGRLAKRLRLGGTALPQHHPQSIKELALELGAKHWHTVTWREGTNARLRSRFARVRVRAAHRDNLREELREPEWLL IEWPKGDAEPLKYWLSTLPEDTPLARMVFEAKMRWRIERDYQDLKQDLGLGHYEGRGWRGFHHHASLSIAAYGFLLAQRL THPDEAGGKKNGAKRQESALPTHYKPRGSPAHAAPRPILDHHLAAAHRRATGSQSASMPLLPSSSGRTN >Mature_469_residues MDELQEFDRYMAHLSEGLGHADRHAGLRGYCTGLMSPLQRKSVEPMAAHMDPLKVRSRHQSLHHFVADANWSDGQMLLRV CQWVVPLMDLKDGGWWIIDDTGFPKQGRHSVGVARQYCGMLGKQDNCQVAVSVSLACEAASVPVAWQLYLPREWADDPAR RDKAGVPEALQFATKPQIALQQIEHLMGQGAPRHCVLADAGYGVDTAFRARLSELGLRYAVGVTGSVTVWPPGREPLPPA AYGGRGRLAKRLRLGGTALPQHHPQSIKELALELGAKHWHTVTWREGTNARLRSRFARVRVRAAHRDNLREELREPEWLL IEWPKGDAEPLKYWLSTLPEDTPLARMVFEAKMRWRIERDYQDLKQDLGLGHYEGRGWRGFHHHASLSIAAYGFLLAQRL THPDEAGGKKNGAKRQESALPTHYKPRGSPAHAAPRPILDHHLAAAHRRATGSQSASMPLLPSSSGRTN
Specific function: Involved in the transposition of the insertion sequence [H]
COG id: COG5659
COG function: function code L; FOG: Transposase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012337 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52453; Mature: 52453
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDELQEFDRYMAHLSEGLGHADRHAGLRGYCTGLMSPLQRKSVEPMAAHMDPLKVRSRHQ CCHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHH SLHHFVADANWSDGQMLLRVCQWVVPLMDLKDGGWWIIDDTGFPKQGRHSVGVARQYCGM HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHH LGKQDNCQVAVSVSLACEAASVPVAWQLYLPREWADDPARRDKAGVPEALQFATKPQIAL CCCCCCCEEEEEEEEEECCCCCCEEEEEEECHHCCCCCHHHCCCCCCHHHHHHCCHHHHH QQIEHLMGQGAPRHCVLADAGYGVDTAFRARLSELGLRYAVGVTGSVTVWPPGREPLPPA HHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCC AYGGRGRLAKRLRLGGTALPQHHPQSIKELALELGAKHWHTVTWREGTNARLRSRFARVR CCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHH VRAAHRDNLREELREPEWLLIEWPKGDAEPLKYWLSTLPEDTPLARMVFEAKMRWRIERD HHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH YQDLKQDLGLGHYEGRGWRGFHHHASLSIAAYGFLLAQRLTHPDEAGGKKNGAKRQESAL HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCC PTHYKPRGSPAHAAPRPILDHHLAAAHRRATGSQSASMPLLPSSSGRTN CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDELQEFDRYMAHLSEGLGHADRHAGLRGYCTGLMSPLQRKSVEPMAAHMDPLKVRSRHQ CCHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHH SLHHFVADANWSDGQMLLRVCQWVVPLMDLKDGGWWIIDDTGFPKQGRHSVGVARQYCGM HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHH LGKQDNCQVAVSVSLACEAASVPVAWQLYLPREWADDPARRDKAGVPEALQFATKPQIAL CCCCCCCEEEEEEEEEECCCCCCEEEEEEECHHCCCCCHHHCCCCCCHHHHHHCCHHHHH QQIEHLMGQGAPRHCVLADAGYGVDTAFRARLSELGLRYAVGVTGSVTVWPPGREPLPPA HHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCC AYGGRGRLAKRLRLGGTALPQHHPQSIKELALELGAKHWHTVTWREGTNARLRSRFARVR CCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHH VRAAHRDNLREELREPEWLLIEWPKGDAEPLKYWLSTLPEDTPLARMVFEAKMRWRIERD HHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH YQDLKQDLGLGHYEGRGWRGFHHHASLSIAAYGFLLAQRLTHPDEAGGKKNGAKRQESAL HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCC PTHYKPRGSPAHAAPRPILDHHLAAAHRRATGSQSASMPLLPSSSGRTN CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1662761 [H]