| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is xlnD [H]
Identifier: 91788072
GI number: 91788072
Start: 2294092
End: 2295333
Strand: Direct
Name: xlnD [H]
Synonym: Bpro_2199
Alternate gene names: 91788072
Gene position: 2294092-2295333 (Clockwise)
Preceding gene: 91788071
Following gene: 91788074
Centisome position: 44.11
GC content: 62.64
Gene sequence:
>1242_bases ATGAAGATTGCAATAGTTGGCGGCGGCATAGGAGGCTTGAGCCTGGCGCTGGCAGTCAAACAACGCGGTCTGGCATGCGA TGTCTTTGAAACCGTCCCGGAGGTCCGGGAGGTCGGTGTCGGTATCACCCTGTTGCCGCACGCGATGCGTGAATTGGCGG CGCTGGGCCTGCAGCCGCAGCTCGAAGCTGCCGGTATTGAAAACGAGGAAAGCGTGTTTTTCAACCGCTTCGGCCAGTTC ATCTACAAAGAGCCACGCGGGCGCCATGCCGGCTATGACTTGCCGGAAATTGGCATCCCGCGCGGCAAGCTGCACCGGCT GCTGTACGAAGCGGCGCTGGAGCGCCTGGGCAGCGGCGCCGTTCACACCGACCACCGTTGCACCGGCGTGGACCAGGACG ACAGCGGCGCCACGGTTCATTTCACGCAGACGTCAAGCGGTGCAGACTTGCCCTCCCGGCGAGCCGACGTGGTGATTGCC TGTGACGGTGTCAACTCGACCGTGCGCCGCCAGTTCTATCCTGACGAGAAGGTCGCTTTTGCCGGCATCAACACCTGGCG CGGCGTCACGCGCCACCAGCCCATTCTGACGGGCAAAAGTTATCTGCGCGTGGGCTCCCTCCACACCGGCAAGATGGTGA TCTACCCCATCGTCGACCGGGTGGATGATGAAGGTACCCAACTGATCAACTGGGTCGCTGAAATCCGGCGTGACAACGCG GCGATGAACGACTGGAACCGCCCGGGCGACCTGAAGGACTTTCTGGACATCTTCAAGGATTGGCGTTTCCCCTGGCTCGA TGTCGCCGCGTTGATTACCAGTGCCGGGCAGATCCTTGAATACCCGATGGTGGACAAGGACCCGGTGCCCCAATGGACGT TTGGCCGCGTCACCCTGCTCGGTGATGCGGCGCATCCGATGTACCCGCGCGGCTCCAACGGTTCGGCCCAGGCCCTGATT GACGCGCGGGTGCTGGCTGAACAGCTTGCGGCCCACGCGGGCGGCGATGCGCGCGCCGCGCTGCAGGCTTACGAGGAACT GCGGCTGGCTCCGACGGCACAGCTTGTGCTGACCAACCGCTCGGTGCCGCCCGACTTCATCAACATCAAGGTCGATGAGC TGAGCGGCGGCAAACCCTTTGCGAACATCGACGAGCTGATCAGCCAGCAGGAACTGCGCAGGATTTCAGAGTACTACAAG AAAGTCGCCGGCTTCTCGCTGGATATGCCCAAGGCGGGTTGA
Upstream 100 bases:
>100_bases TGCAAGCTCAATATGCTATCAAATGTGTAGCATAACTGTTTCGTATTTAAAAGACCGGTCTCTGTTCACCCCATAAGAGC CACTAACCGACGAGAACACC
Downstream 100 bases:
>100_bases ATAACCCACTGATCGAGTCCGCGAAGACAATGCACGCGGTCAGCGTGAGACACCCACCCAGACCAGCGTGCCACTGTCTG TCGCTGTCTGCCGTGGTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: Constitutive 3-hydroxybenzoate 6-hydroxylase [H]
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MKIAIVGGGIGGLSLALAVKQRGLACDVFETVPEVREVGVGITLLPHAMRELAALGLQPQLEAAGIENEESVFFNRFGQF IYKEPRGRHAGYDLPEIGIPRGKLHRLLYEAALERLGSGAVHTDHRCTGVDQDDSGATVHFTQTSSGADLPSRRADVVIA CDGVNSTVRRQFYPDEKVAFAGINTWRGVTRHQPILTGKSYLRVGSLHTGKMVIYPIVDRVDDEGTQLINWVAEIRRDNA AMNDWNRPGDLKDFLDIFKDWRFPWLDVAALITSAGQILEYPMVDKDPVPQWTFGRVTLLGDAAHPMYPRGSNGSAQALI DARVLAEQLAAHAGGDARAALQAYEELRLAPTAQLVLTNRSVPPDFINIKVDELSGGKPFANIDELISQQELRRISEYYK KVAGFSLDMPKAG
Sequences:
>Translated_413_residues MKIAIVGGGIGGLSLALAVKQRGLACDVFETVPEVREVGVGITLLPHAMRELAALGLQPQLEAAGIENEESVFFNRFGQF IYKEPRGRHAGYDLPEIGIPRGKLHRLLYEAALERLGSGAVHTDHRCTGVDQDDSGATVHFTQTSSGADLPSRRADVVIA CDGVNSTVRRQFYPDEKVAFAGINTWRGVTRHQPILTGKSYLRVGSLHTGKMVIYPIVDRVDDEGTQLINWVAEIRRDNA AMNDWNRPGDLKDFLDIFKDWRFPWLDVAALITSAGQILEYPMVDKDPVPQWTFGRVTLLGDAAHPMYPRGSNGSAQALI DARVLAEQLAAHAGGDARAALQAYEELRLAPTAQLVLTNRSVPPDFINIKVDELSGGKPFANIDELISQQELRRISEYYK KVAGFSLDMPKAG >Mature_413_residues MKIAIVGGGIGGLSLALAVKQRGLACDVFETVPEVREVGVGITLLPHAMRELAALGLQPQLEAAGIENEESVFFNRFGQF IYKEPRGRHAGYDLPEIGIPRGKLHRLLYEAALERLGSGAVHTDHRCTGVDQDDSGATVHFTQTSSGADLPSRRADVVIA CDGVNSTVRRQFYPDEKVAFAGINTWRGVTRHQPILTGKSYLRVGSLHTGKMVIYPIVDRVDDEGTQLINWVAEIRRDNA AMNDWNRPGDLKDFLDIFKDWRFPWLDVAALITSAGQILEYPMVDKDPVPQWTFGRVTLLGDAAHPMYPRGSNGSAQALI DARVLAEQLAAHAGGDARAALQAYEELRLAPTAQLVLTNRSVPPDFINIKVDELSGGKPFANIDELISQQELRRISEYYK KVAGFSLDMPKAG
Specific function: Catalyzes the NAD- or NADP-dependent conversion of 3- hydroxybenzoate to gentisate. The affinity of the enzyme toward NAD is twice as high as for NADP. The enzyme shows higher specific activities against the intermediates in the degradation of 2,5- xyleno
COG id: COG0654
COG function: function code HC; 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 3-hydroxybenzoate 6-hydroxylase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002938 - InterPro: IPR003042 [H]
Pfam domain/function: PF01494 FAD_binding_3 [H]
EC number: =1.14.13.24 [H]
Molecular weight: Translated: 45321; Mature: 45321
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIAIVGGGIGGLSLALAVKQRGLACDVFETVPEVREVGVGITLLPHAMRELAALGLQPQ CEEEEEECCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHCCCEEHHHHHHHHHHHHCCCCC LEAAGIENEESVFFNRFGQFIYKEPRGRHAGYDLPEIGIPRGKLHRLLYEAALERLGSGA HHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC VHTDHRCTGVDQDDSGATVHFTQTSSGADLPSRRADVVIACDGVNSTVRRQFYPDEKVAF CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCHHHHHHCCCCCCEEE AGINTWRGVTRHQPILTGKSYLRVGSLHTGKMVIYPIVDRVDDEGTQLINWVAEIRRDNA ECCHHHCCCCCCCCEECCCHHEEECCCCCCCEEEEEEHHCCCCCHHHHHHHHHHHHHCCC AMNDWNRPGDLKDFLDIFKDWRFPWLDVAALITSAGQILEYPMVDKDPVPQWTFGRVTLL CCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCEEEEE GDAAHPMYPRGSNGSAQALIDARVLAEQLAAHAGGDARAALQAYEELRLAPTAQLVLTNR ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECC SVPPDFINIKVDELSGGKPFANIDELISQQELRRISEYYKKVAGFSLDMPKAG CCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKIAIVGGGIGGLSLALAVKQRGLACDVFETVPEVREVGVGITLLPHAMRELAALGLQPQ CEEEEEECCCHHHHHHHHHHHCCCEEHHHHHHHHHHHHCCCEEHHHHHHHHHHHHCCCCC LEAAGIENEESVFFNRFGQFIYKEPRGRHAGYDLPEIGIPRGKLHRLLYEAALERLGSGA HHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC VHTDHRCTGVDQDDSGATVHFTQTSSGADLPSRRADVVIACDGVNSTVRRQFYPDEKVAF CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCHHHHHHCCCCCCEEE AGINTWRGVTRHQPILTGKSYLRVGSLHTGKMVIYPIVDRVDDEGTQLINWVAEIRRDNA ECCHHHCCCCCCCCEECCCHHEEECCCCCCCEEEEEEHHCCCCCHHHHHHHHHHHHHCCC AMNDWNRPGDLKDFLDIFKDWRFPWLDVAALITSAGQILEYPMVDKDPVPQWTFGRVTLL CCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCEEEEE GDAAHPMYPRGSNGSAQALIDARVLAEQLAAHAGGDARAALQAYEELRLAPTAQLVLTNR ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEECC SVPPDFINIKVDELSGGKPFANIDELISQQELRRISEYYKKVAGFSLDMPKAG CCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12909360 [H]