| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is pccB [H]
Identifier: 91788037
GI number: 91788037
Start: 2257439
End: 2258971
Strand: Direct
Name: pccB [H]
Synonym: Bpro_2164
Alternate gene names: 91788037
Gene position: 2257439-2258971 (Clockwise)
Preceding gene: 91788036
Following gene: 91788038
Centisome position: 43.41
GC content: 61.77
Gene sequence:
>1533_bases ATGCAAGACATCCTCGAACAACTCGAAAAAAAGCGTGCTGCAGCCCGCCTCGGCGGTGGCCAGAAGCGCATTGACGCCCA GCATGGCAAGGGTAAGCTCACCGCGCGTGAGCGCCTGGAGCTGCTGCTTGACGAAGGCACCTTTGAAGAATGGGACATGT TTGTCGAGCACCGCTGCACCGACTTCGGCATGGCCGACAACAAGATTCCCGGCGACGGCGTGGTCACCGGCTACGGCATG ATCAACGGCCGGCTGGTGTTTGTCTTCAGCCAGGACTTCACGGTGTTCGGCGGTGCGCTCAGCGAAGCCCATGCCGAGAA AATCTGCAAGGTGATGGACCAGGCCATGAAGGTCGGCGCGCCGGTGATTGGCCTGAACGACTCGGGTGGTGCGCGCATCC AGGAAGGTGTGGCTTCGCTGGGCGGCTATGCCGACGTGTTCCAGCGCAACGTGATGGCCAGCGGCGTGATCCCGCAGATC AGCATGATCATGGGGCCCAGCGCCGGCGGCGCGGTGTATTCGCCCGCCATGACCGACTTCATCTTCATGGTCAAGGACAG CTCCTACATGTTTGTCACCGGCCCCGAGGTGGTGAAGACAGTCACGCACGAAGAGGTGAGCGCCGAGGAGTTGGGCGGTG CCATCACGCACACCACCCGCAGTGGCGTGGCCGACCTCGCCTTCGAGAATGACGTCGAAGCGCTGTTGATGCTGCGCCGC CTCTACAACTACCTGCCGCTGAACAACCGTGAGAAAGCCCCGGCGCGCCCCAGCGCCGACCCGGCCGGGCGCATGGACCT GAGCCTGGACACGCTGGTGCCCGAGAACCCCAACAAGCCGTATGACATGAAGGAGCTGATCGTCAAGACAGTGGACGACG GCGATTTCTTCGAGATCCAGCCCGAGTACGCCAAGAACATCGTCATTGGTTTTGCGCGCATGGAAGGCCAGTCGGTGGGC ATCGTGGCCAACCAGCCGCTGGTGCTGGCAGGCTGCCTCGATATCAAGAGCTCGATCAAGGCCGCGCGCTTTGTGCGGTT TTGCGATGCCTTCAATATTCCGGTAATCACCTTTGTCGACGTGCCCGGCTTCATGCCCGGTACCAGCCAGGAATACGGCG GCATCATCAAGCACGGCGCCAAGCTGCTGTACGCCTATGCCGAATGCACCGTACCCAAGATCACCGTCATCACGCGCAAG GCTTATGGCGGCGCCTACGACGTGATGAGTTCCAAACACCTGCGCGGCGACGTCAACTTTGCCTGGCCCAACGCCGAGAT CGCCGTGATGGGCGCCAAGGGCGCGGTGGAGATCATCTTTCGTGAAGACAAGGGTGACCCGGCCAAGCTGGCGGCCAAGG AGGCCGAATACAAGGCCCGCTTCGCCAACCCCTTTGTCGCGGGCGCTCGCGGCTTCATCGACGACGTGATCCTGCCGCAT GAAACGCGTAGACGCATTTGCCGCTCGCTGGTGATGCTGCGTGACAAGAAGATTGAGAACCCGTGGCGCAAGCACGGAAA CATTCCGTTGTGA
Upstream 100 bases:
>100_bases CCCGCCTCAACCGCAGCACGGAATCTGCTTGCAGCCCAATTGGGGCGTGCGCCGGCGGCCATCAAATAAAGAGCATTTCA AAGGGTACAGAAAGTAAATC
Downstream 100 bases:
>100_bases TGCAAATTGCCAAACCCATGAGCGTTCCTTTGACATGGCTAGCCTGAGCACCTGGCTTGACGCCAAACTGGCCGCAGGGT CCGTCAAGCAACATCGTCAA
Product: carboxyl transferase
Products: NA
Alternate protein names: PCCase; Propanoyl-CoA:carbon dioxide ligase [H]
Number of amino acids: Translated: 510; Mature: 510
Protein sequence:
>510_residues MQDILEQLEKKRAAARLGGGQKRIDAQHGKGKLTARERLELLLDEGTFEEWDMFVEHRCTDFGMADNKIPGDGVVTGYGM INGRLVFVFSQDFTVFGGALSEAHAEKICKVMDQAMKVGAPVIGLNDSGGARIQEGVASLGGYADVFQRNVMASGVIPQI SMIMGPSAGGAVYSPAMTDFIFMVKDSSYMFVTGPEVVKTVTHEEVSAEELGGAITHTTRSGVADLAFENDVEALLMLRR LYNYLPLNNREKAPARPSADPAGRMDLSLDTLVPENPNKPYDMKELIVKTVDDGDFFEIQPEYAKNIVIGFARMEGQSVG IVANQPLVLAGCLDIKSSIKAARFVRFCDAFNIPVITFVDVPGFMPGTSQEYGGIIKHGAKLLYAYAECTVPKITVITRK AYGGAYDVMSSKHLRGDVNFAWPNAEIAVMGAKGAVEIIFREDKGDPAKLAAKEAEYKARFANPFVAGARGFIDDVILPH ETRRRICRSLVMLRDKKIENPWRKHGNIPL
Sequences:
>Translated_510_residues MQDILEQLEKKRAAARLGGGQKRIDAQHGKGKLTARERLELLLDEGTFEEWDMFVEHRCTDFGMADNKIPGDGVVTGYGM INGRLVFVFSQDFTVFGGALSEAHAEKICKVMDQAMKVGAPVIGLNDSGGARIQEGVASLGGYADVFQRNVMASGVIPQI SMIMGPSAGGAVYSPAMTDFIFMVKDSSYMFVTGPEVVKTVTHEEVSAEELGGAITHTTRSGVADLAFENDVEALLMLRR LYNYLPLNNREKAPARPSADPAGRMDLSLDTLVPENPNKPYDMKELIVKTVDDGDFFEIQPEYAKNIVIGFARMEGQSVG IVANQPLVLAGCLDIKSSIKAARFVRFCDAFNIPVITFVDVPGFMPGTSQEYGGIIKHGAKLLYAYAECTVPKITVITRK AYGGAYDVMSSKHLRGDVNFAWPNAEIAVMGAKGAVEIIFREDKGDPAKLAAKEAEYKARFANPFVAGARGFIDDVILPH ETRRRICRSLVMLRDKKIENPWRKHGNIPL >Mature_510_residues MQDILEQLEKKRAAARLGGGQKRIDAQHGKGKLTARERLELLLDEGTFEEWDMFVEHRCTDFGMADNKIPGDGVVTGYGM INGRLVFVFSQDFTVFGGALSEAHAEKICKVMDQAMKVGAPVIGLNDSGGARIQEGVASLGGYADVFQRNVMASGVIPQI SMIMGPSAGGAVYSPAMTDFIFMVKDSSYMFVTGPEVVKTVTHEEVSAEELGGAITHTTRSGVADLAFENDVEALLMLRR LYNYLPLNNREKAPARPSADPAGRMDLSLDTLVPENPNKPYDMKELIVKTVDDGDFFEIQPEYAKNIVIGFARMEGQSVG IVANQPLVLAGCLDIKSSIKAARFVRFCDAFNIPVITFVDVPGFMPGTSQEYGGIIKHGAKLLYAYAECTVPKITVITRK AYGGAYDVMSSKHLRGDVNFAWPNAEIAVMGAKGAVEIIFREDKGDPAKLAAKEAEYKARFANPFVAGARGFIDDVILPH ETRRRICRSLVMLRDKKIENPWRKHGNIPL
Specific function: This Protein Is A Component Of The Acetyl Coenzyme A Carboxylase Complex; First, Biotin Carboxylase Catalyzes The Carboxylation Of The Carrier Protein And Then The Transcarboxylase Transfers The Carboxyl Group To Form Malonyl-CoA. [C]
COG id: COG4799
COG function: function code I; Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 carboxyltransferase domain [H]
Homologues:
Organism=Homo sapiens, GI119943100, Length=507, Percent_Identity=70.6114398422091, Blast_Score=748, Evalue=0.0, Organism=Homo sapiens, GI295821216, Length=527, Percent_Identity=67.9316888045541, Blast_Score=734, Evalue=0.0, Organism=Homo sapiens, GI11545863, Length=507, Percent_Identity=33.9250493096647, Blast_Score=232, Evalue=8e-61, Organism=Homo sapiens, GI38679960, Length=392, Percent_Identity=25.2551020408163, Blast_Score=79, Evalue=9e-15, Organism=Homo sapiens, GI38679971, Length=392, Percent_Identity=25.2551020408163, Blast_Score=79, Evalue=9e-15, Organism=Homo sapiens, GI38679974, Length=392, Percent_Identity=25.2551020408163, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI38679977, Length=392, Percent_Identity=25.2551020408163, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI38679967, Length=392, Percent_Identity=25.2551020408163, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI134142062, Length=398, Percent_Identity=23.1155778894472, Blast_Score=68, Evalue=3e-11, Organism=Escherichia coli, GI1788655, Length=188, Percent_Identity=27.1276595744681, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI25147362, Length=507, Percent_Identity=68.6390532544379, Blast_Score=744, Evalue=0.0, Organism=Caenorhabditis elegans, GI25147359, Length=507, Percent_Identity=68.6390532544379, Blast_Score=743, Evalue=0.0, Organism=Caenorhabditis elegans, GI17552936, Length=501, Percent_Identity=33.5329341317365, Blast_Score=252, Evalue=3e-67, Organism=Drosophila melanogaster, GI24586065, Length=513, Percent_Identity=34.1130604288499, Blast_Score=239, Evalue=5e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000438 - InterPro: IPR000022 - InterPro: IPR011763 - InterPro: IPR011762 [H]
Pfam domain/function: PF01039 Carboxyl_trans [H]
EC number: =6.4.1.3 [H]
Molecular weight: Translated: 55813; Mature: 55813
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: PS50980 COA_CT_NTER ; PS50989 COA_CT_CTER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDILEQLEKKRAAARLGGGQKRIDAQHGKGKLTARERLELLLDEGTFEEWDMFVEHRCT CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCC DFGMADNKIPGDGVVTGYGMINGRLVFVFSQDFTVFGGALSEAHAEKICKVMDQAMKVGA CCCCCCCCCCCCCEEEEEEEECCEEEEEEECCCEEECCHHHHHHHHHHHHHHHHHHHCCC PVIGLNDSGGARIQEGVASLGGYADVFQRNVMASGVIPQISMIMGPSAGGAVYSPAMTDF CEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHEECCCCCCCEECCHHHEE IFMVKDSSYMFVTGPEVVKTVTHEEVSAEELGGAITHTTRSGVADLAFENDVEALLMLRR EEEEECCCEEEEECHHHHHHHHHHHCCHHHHCCEEEECCCCCCHHHHHCCCHHHHHHHHH LYNYLPLNNREKAPARPSADPAGRMDLSLDTLVPENPNKPYDMKELIVKTVDDGDFFEIQ HHHHCCCCCCCCCCCCCCCCCCCCCEEEEHHCCCCCCCCCCCHHHHHHHCCCCCCEEEEC PEYAKNIVIGFARMEGQSVGIVANQPLVLAGCLDIKSSIKAARFVRFCDAFNIPVITFVD HHHHCCEEEEEEEECCCEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEE VPGFMPGTSQEYGGIIKHGAKLLYAYAECTVPKITVITRKAYGGAYDVMSSKHLRGDVNF CCCCCCCCCHHHCHHHHHHHHHEEHHHHCCCCEEEEEEECCCCCHHHHHCCCCCCCCCEE AWPNAEIAVMGAKGAVEIIFREDKGDPAKLAAKEAEYKARFANPFVAGARGFIDDVILPH ECCCCEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHCCHHHHHHCCCCC ETRRRICRSLVMLRDKKIENPWRKHGNIPL HHHHHHHHHHHHHHHHCCCCHHHHCCCCCC >Mature Secondary Structure MQDILEQLEKKRAAARLGGGQKRIDAQHGKGKLTARERLELLLDEGTFEEWDMFVEHRCT CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCC DFGMADNKIPGDGVVTGYGMINGRLVFVFSQDFTVFGGALSEAHAEKICKVMDQAMKVGA CCCCCCCCCCCCCEEEEEEEECCEEEEEEECCCEEECCHHHHHHHHHHHHHHHHHHHCCC PVIGLNDSGGARIQEGVASLGGYADVFQRNVMASGVIPQISMIMGPSAGGAVYSPAMTDF CEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHEECCCCCCCEECCHHHEE IFMVKDSSYMFVTGPEVVKTVTHEEVSAEELGGAITHTTRSGVADLAFENDVEALLMLRR EEEEECCCEEEEECHHHHHHHHHHHCCHHHHCCEEEECCCCCCHHHHHCCCHHHHHHHHH LYNYLPLNNREKAPARPSADPAGRMDLSLDTLVPENPNKPYDMKELIVKTVDDGDFFEIQ HHHHCCCCCCCCCCCCCCCCCCCCCEEEEHHCCCCCCCCCCCHHHHHHHCCCCCCEEEEC PEYAKNIVIGFARMEGQSVGIVANQPLVLAGCLDIKSSIKAARFVRFCDAFNIPVITFVD HHHHCCEEEEEEEECCCEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEE VPGFMPGTSQEYGGIIKHGAKLLYAYAECTVPKITVITRKAYGGAYDVMSSKHLRGDVNF CCCCCCCCCHHHCHHHHHHHHHEEHHHHCCCCEEEEEEECCCCCHHHHHCCCCCCCCCEE AWPNAEIAVMGAKGAVEIIFREDKGDPAKLAAKEAEYKARFANPFVAGARGFIDDVILPH ECCCCEEEEEECCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHCCHHHHHHCCCCC ETRRRICRSLVMLRDKKIENPWRKHGNIPL HHHHHHHHHHHHHHHHCCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8830278 [H]