Click here to switch to the map view.

The map label for this gene is yiaN [C]

Identifier: 91787995

GI number: 91787995

Start: 2213020

End: 2214339

Strand: Reverse

Name: yiaN [C]

Synonym: Bpro_2122

Alternate gene names: 91787995

Gene position: 2214339-2213020 (Counterclockwise)

Preceding gene: 91787996

Following gene: 91787994

Centisome position: 42.58

GC content: 59.62

Gene sequence:

>1320_bases
ATGAGTTCACTGAGTTTGACGCTGCTGATCTTTGGCAGCATGCTGGCCCTGATGGCCGTGCGCGTGCCCATCGCTGTCAG
CATGTTCGGGGCGGGTGCCATCGGCTATGTCACGCAAACGGGTTGGGCGCCTTTTGCAAGTTTCCTGAACACCCAGGCTT
TTGCACGCTTTGCCGGCTACGACCTCTCGGTGATTCCGCTGTTCATCCTGATGGGGCACTTTGCCACCAAGGGCGGTATC
AGCAAGTCGCTGTTTGAATTTGCCGCAGGTGTCATGGGGCGCTTCAAGGGCGGGCTGGCCATGGCCTCCCTGCTGGCCTG
CGCAGCGTTCGGCGCAATCAGCGGTTCCTCGGTGGCGACCGCGGCCACCATCACCGGGGTTGCCTTGCCTGAAATGCAGC
GCCACGGCTATTCGGGCCGGCTGGCCACCGGAACGCTGGCTGCAGGCGGCACGCTGGGCATCCAGTTGCCACCTTCCATC
GTGCTGGTGATCTACGCGATTCTTACCGAGCAGAACATCAGCAAGCTGTTCGCTGCTGCGGTAATTCCCGGCATTATTGC
CATGTGCGGCTACATGATCGCAGTGGCGATTTATGTGCGCGTTGTGCCAGGCCACGCACCTGAGGTTCAGGCAGACCGTC
AGGGCGTGACGATGCACTCCCTGATCGGCGTGACCCCCATTGTCGTGATTTTTCTGCTGGTCTTTGGTGGCATCTACGGC
GGGTTTTTCACCCCTACCGAAGGTGCTGCCGTGGGGGCGGCTTCGACGTTTCTGACCGCCCTGCTCAAGGGCGAGATGAC
CCTGGACAAATTCAAGGAATGCTTTTACGGCACGGCGGTAAGTGCCGCCATGATTTTCCTGATTTTCATCGGCGCCGACC
TGATGAACTCGGCGCTGGCGCTCACGCAGGTTCCCAACCAGTTGGCCGCGCTGGTCGGCGGCTGGGGACTCTCGCCGCTG
GTGGTGGTGGTCGCGATCCTGCTTTTCTATGTGTTGCTCGGCGCCGTCATGGACGAGCTCTCCATGCTGCTCTTGACCAT
TCCCATCTTTTTCCCCATGGTCATGGCGCTCGACTTTGGCATGGCAAAAGATTTAGTAGCCATCTGGTTTGGCATCATGG
TGCTGATGACCGTGGGGTTCGGCCTGATTGCACCGCCCGTCGGGCTGAATGTCTACATCGTCAATGGCCTGGCCAAAAAT
GTGCCCATGAGCGAAACCTACCGGGGGGTGATGCCTTTCCTGTTCAGCGACGTGCTGCGCACCATGCTGTTCCTGTTCTT
CCCCATCATTCCGCTGTGGCTGGTGGGCTTTATCAAGTGA

Upstream 100 bases:

>100_bases
TCTACGCCATGATGGTGCCGCCTTTTATCCTGACAGGGCTGATTGCCCTGCGCCAGACACTGTTTGGTTTTGGCTCCGAA
GAAGCTGGAGAGACCACGAT

Downstream 100 bases:

>100_bases
AATCCGCGGGTAAGTCCTGAAAACCACCGGCCGCTTTTACCGTTAATTTCAATAACTATCCCGATACAAGGAGACTTCAT
CATGATTCAACGCCGCACCC

Product: TRAP dicarboxylate transporter subunit DctM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 439; Mature: 438

Protein sequence:

>439_residues
MSSLSLTLLIFGSMLALMAVRVPIAVSMFGAGAIGYVTQTGWAPFASFLNTQAFARFAGYDLSVIPLFILMGHFATKGGI
SKSLFEFAAGVMGRFKGGLAMASLLACAAFGAISGSSVATAATITGVALPEMQRHGYSGRLATGTLAAGGTLGIQLPPSI
VLVIYAILTEQNISKLFAAAVIPGIIAMCGYMIAVAIYVRVVPGHAPEVQADRQGVTMHSLIGVTPIVVIFLLVFGGIYG
GFFTPTEGAAVGAASTFLTALLKGEMTLDKFKECFYGTAVSAAMIFLIFIGADLMNSALALTQVPNQLAALVGGWGLSPL
VVVVAILLFYVLLGAVMDELSMLLLTIPIFFPMVMALDFGMAKDLVAIWFGIMVLMTVGFGLIAPPVGLNVYIVNGLAKN
VPMSETYRGVMPFLFSDVLRTMLFLFFPIIPLWLVGFIK

Sequences:

>Translated_439_residues
MSSLSLTLLIFGSMLALMAVRVPIAVSMFGAGAIGYVTQTGWAPFASFLNTQAFARFAGYDLSVIPLFILMGHFATKGGI
SKSLFEFAAGVMGRFKGGLAMASLLACAAFGAISGSSVATAATITGVALPEMQRHGYSGRLATGTLAAGGTLGIQLPPSI
VLVIYAILTEQNISKLFAAAVIPGIIAMCGYMIAVAIYVRVVPGHAPEVQADRQGVTMHSLIGVTPIVVIFLLVFGGIYG
GFFTPTEGAAVGAASTFLTALLKGEMTLDKFKECFYGTAVSAAMIFLIFIGADLMNSALALTQVPNQLAALVGGWGLSPL
VVVVAILLFYVLLGAVMDELSMLLLTIPIFFPMVMALDFGMAKDLVAIWFGIMVLMTVGFGLIAPPVGLNVYIVNGLAKN
VPMSETYRGVMPFLFSDVLRTMLFLFFPIIPLWLVGFIK
>Mature_438_residues
SSLSLTLLIFGSMLALMAVRVPIAVSMFGAGAIGYVTQTGWAPFASFLNTQAFARFAGYDLSVIPLFILMGHFATKGGIS
KSLFEFAAGVMGRFKGGLAMASLLACAAFGAISGSSVATAATITGVALPEMQRHGYSGRLATGTLAAGGTLGIQLPPSIV
LVIYAILTEQNISKLFAAAVIPGIIAMCGYMIAVAIYVRVVPGHAPEVQADRQGVTMHSLIGVTPIVVIFLLVFGGIYGG
FFTPTEGAAVGAASTFLTALLKGEMTLDKFKECFYGTAVSAAMIFLIFIGADLMNSALALTQVPNQLAALVGGWGLSPLV
VVVAILLFYVLLGAVMDELSMLLLTIPIFFPMVMALDFGMAKDLVAIWFGIMVLMTVGFGLIAPPVGLNVYIVNGLAKNV
PMSETYRGVMPFLFSDVLRTMLFLFFPIIPLWLVGFIK

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TRAP transporter large permease family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=379, Percent_Identity=28.2321899736148, Blast_Score=122, Evalue=4e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 46170; Mature: 46039

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SSLSLTLLIFGSMLALMAVRVPIAVSMFGAGAIGYVTQTGWAPFASFLNTQAFARFAGY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCC
DLSVIPLFILMGHFATKGGISKSLFEFAAGVMGRFKGGLAMASLLACAAFGAISGSSVAT
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHH
AATITGVALPEMQRHGYSGRLATGTLAAGGTLGIQLPPSIVLVIYAILTEQNISKLFAAA
HHHHHHHHHHHHHHCCCCCCCCCCEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
VIPGIIAMCGYMIAVAIYVRVVPGHAPEVQADRQGVTMHSLIGVTPIVVIFLLVFGGIYG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
GFFTPTEGAAVGAASTFLTALLKGEMTLDKFKECFYGTAVSAAMIFLIFIGADLMNSALA
CCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTQVPNQLAALVGGWGLSPLVVVVAILLFYVLLGAVMDELSMLLLTIPIFFPMVMALDFG
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MAKDLVAIWFGIMVLMTVGFGLIAPPVGLNVYIVNGLAKNVPMSETYRGVMPFLFSDVLR
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHCCCHHHHHHHHHHHHHHHHHH
TMLFLFFPIIPLWLVGFIK
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]