| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91787992
Identifier: 91787992
GI number: 91787992
Start: 2209895
End: 2210680
Strand: Reverse
Name: 91787992
Synonym: Bpro_2119
Alternate gene names: NA
Gene position: 2210680-2209895 (Counterclockwise)
Preceding gene: 91787994
Following gene: 91787991
Centisome position: 42.51
GC content: 65.14
Gene sequence:
>786_bases ATGCCATCCGCAGCGCAAGCCGCCCCCCTGCCCGCCGCCAGCAATTACCGTGTCGGCCTGATCGTGCCGAGCTCCAACAC CACCATGGAGACGGAAATCCCGGCCATGCTGCGCGCCCGCGAGCAGGTGCTGCCCGAACGTTTCACGTTTCACTCCAGCC GCATGCGCATGAAATCGGTCACCAAGGAAGAGCTGGAAGCCATGGACCGCGACTCGGACCGCTGTGCGCTCGAGCTGTCA GACGCCCGCATGGATGCCATGGGCTACGCCTGCCTGGTGGCCATCATGAGCATGGGCAAGGGCTACCACCGTGAATCCCA GCGTCGTCTGCACGAAGCCACCGTGGCCAACGGCGCACCCACACCGGTGATCACCAGCGCAGGCGCGCTGGTCGAGGGCC TGCAGGCCATGGGCGCCAAGCGCGTGGCCATCATCGCGCCGTACATGAAACCGCTGACCCGCCTCGTCATTGACTACATC GAAAACGAAGGGATTGAAGTGATTGACAGCATTTCGCTGGAAATCCACGACAACCTCGCGGTCGGTGCGCGCGACCCGAA GGCACCGGCCGAGTTGTGGAAGCAGCTCAACATCAAGGGCGCCGATGCCATCGTCGCTTCGGCCTGCGTGCAGATGCCTT CGCTCGCTTCTGTGCCACTCATCGAGGCTGCGAGCGGCCTGCCCGTGGTGTCCAGCGCCGTCTGCACGACTTATGCCATT CTCAAGAGCCTCGGGCTGGAGCGCCGCGTGCCCGGCGCCGGCGCCTTGCTGTCGGGCCGCTACTAG
Upstream 100 bases:
>100_bases CGATCTGTTTCAGGTATGGATTTATCTTGATTATGTATTTGCCAGTATGGATCAAACCACCAAGAATAGGCAAATCCCCA GCCACCCAGGAGACAAGTCC
Downstream 100 bases:
>100_bases CCGACGCCCCCGCACAACCCCTCGAGTAACAATACAAGCACACAACTAATACAGGAGACTTTCCCCATGATCACTCTTAC CCAACACGTGCCGCTACGCC
Product: Asp/Glu racemase
Products: fumarate
Alternate protein names: Maleate Cis-Trans Isomerase; Asp/Glu/Hydantoin Racemase; Arylmalonate Decarboxylase; Decarboxylase; Asp/Glu/Hydantoin Racemase Family Protein; Ectoine Utilization Protein EutA; Maleate Cis-Trans Isomerase Protein; Arylmalonate Decarboxylase Protein; Maleate Isomerase; Asp/Glu/Hydantoin Racemase Family; Pyridoxal-5-Phosphate-Dependent Beta Subunit; Cis-Trans Isomerase
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MPSAAQAAPLPAASNYRVGLIVPSSNTTMETEIPAMLRAREQVLPERFTFHSSRMRMKSVTKEELEAMDRDSDRCALELS DARMDAMGYACLVAIMSMGKGYHRESQRRLHEATVANGAPTPVITSAGALVEGLQAMGAKRVAIIAPYMKPLTRLVIDYI ENEGIEVIDSISLEIHDNLAVGARDPKAPAELWKQLNIKGADAIVASACVQMPSLASVPLIEAASGLPVVSSAVCTTYAI LKSLGLERRVPGAGALLSGRY
Sequences:
>Translated_261_residues MPSAAQAAPLPAASNYRVGLIVPSSNTTMETEIPAMLRAREQVLPERFTFHSSRMRMKSVTKEELEAMDRDSDRCALELS DARMDAMGYACLVAIMSMGKGYHRESQRRLHEATVANGAPTPVITSAGALVEGLQAMGAKRVAIIAPYMKPLTRLVIDYI ENEGIEVIDSISLEIHDNLAVGARDPKAPAELWKQLNIKGADAIVASACVQMPSLASVPLIEAASGLPVVSSAVCTTYAI LKSLGLERRVPGAGALLSGRY >Mature_260_residues PSAAQAAPLPAASNYRVGLIVPSSNTTMETEIPAMLRAREQVLPERFTFHSSRMRMKSVTKEELEAMDRDSDRCALELSD ARMDAMGYACLVAIMSMGKGYHRESQRRLHEATVANGAPTPVITSAGALVEGLQAMGAKRVAIIAPYMKPLTRLVIDYIE NEGIEVIDSISLEIHDNLAVGARDPKAPAELWKQLNIKGADAIVASACVQMPSLASVPLIEAASGLPVVSSAVCTTYAIL KSLGLERRVPGAGALLSGRY
Specific function: Unknown
COG id: COG3473
COG function: function code Q; Maleate cis-trans isomerase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 5.2.1.1
Molecular weight: Translated: 27920; Mature: 27789
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSAAQAAPLPAASNYRVGLIVPSSNTTMETEIPAMLRAREQVLPERFTFHSSRMRMKSV CCCCCCCCCCCCCCCCEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TKEELEAMDRDSDRCALELSDARMDAMGYACLVAIMSMGKGYHRESQRRLHEATVANGAP HHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC TPVITSAGALVEGLQAMGAKRVAIIAPYMKPLTRLVIDYIENEGIEVIDSISLEIHDNLA CCCCHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHCCCCEEEHHEEEEEECCEE VGARDPKAPAELWKQLNIKGADAIVASACVQMPSLASVPLIEAASGLPVVSSAVCTTYAI ECCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHH LKSLGLERRVPGAGALLSGRY HHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PSAAQAAPLPAASNYRVGLIVPSSNTTMETEIPAMLRAREQVLPERFTFHSSRMRMKSV CCCCCCCCCCCCCCCEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TKEELEAMDRDSDRCALELSDARMDAMGYACLVAIMSMGKGYHRESQRRLHEATVANGAP HHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCC TPVITSAGALVEGLQAMGAKRVAIIAPYMKPLTRLVIDYIENEGIEVIDSISLEIHDNLA CCCCHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHCCCCEEEHHEEEEEECCEE VGARDPKAPAELWKQLNIKGADAIVASACVQMPSLASVPLIEAASGLPVVSSAVCTTYAI ECCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHH LKSLGLERRVPGAGALLSGRY HHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: maleate
Specific reaction: maleate = fumarate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA