Click here to switch to the map view.

The map label for this gene is nudL [H]

Identifier: 91787930

GI number: 91787930

Start: 2135566

End: 2136246

Strand: Reverse

Name: nudL [H]

Synonym: Bpro_2054

Alternate gene names: 91787930

Gene position: 2136246-2135566 (Counterclockwise)

Preceding gene: 91787931

Following gene: 91787928

Centisome position: 41.08

GC content: 69.02

Gene sequence:

>681_bases
GTGACAGACACGAGCCGCAACATGCAGCAGGACCAGCATCTCAGAGCACGCATCGAGGAGATGCTGCGCGCCTTCACGCT
GCAGGCAGCCGAGCGCGACCAGCAGCATGCGGCGGCGGTGGCCGTGGTCATTACCGATGAAGGCCATGGCGCCGAACTGC
CCGGTTTCCCGCGGCACGCGGCGTGGAGCACCCAGGCGGCCCTGCTGCTGACGCGGCGCGCCGGCCACCTGCGCAAGCAT
GCGGGGCAGTGGGCCCTGCCCGGGGGACGCATCGACGCAGGAGAAACGGCGGAGCAAGCCGCGCTGCGCGAGTTGGCCGA
GGAGGTGCACCTGGAACTCGATGTCAGCGCCATCCTGGGCCGGCTCGATGATTTTGTGACCCGCTCGGGTTTTGTGATCA
CGCCGGTGGTTGTGTGGGCCGGCGCGGCGCAGCACATCCGGCCCAATCCGGCCGAGGTGGCCAGCATTCACCGCATCCCC
ATCGCCGAGTTTCTGCGCGCAGACGCGCCCATGCTGGCCGATGAAGGGCACGGCGGGCACCCGGTGCTGCGCATGCCGGT
CGGCAACCACTGGATTGCCGCGCCGACGGCAGCGATCCTCTACCAGTTTCGGGAGGTCTGCATCGAGGGCCGGCCCACCC
GCGTGGCGCATTTCGAGCAGCCGGCGTTTGCCTGGAAATAG

Upstream 100 bases:

>100_bases
GCCAGGCTGCGCGAGAGCTTTCCCGACCTGCCGGACGAGCCCGACGCCAGAACGGTGTTTGCCAAGCTGCGGGAACTGCG
CAACCAGTGGTGAGCGGAGA

Downstream 100 bases:

>100_bases
GCGCGCAGGACCGCACCCACGCGGCCCACGCCACCCGCCCGGCGAACGCCGTCAACCGGGTGCAAACGCCATGAATCGCT
GCAATGCAGGACTGGCGGCC

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MTDTSRNMQQDQHLRARIEEMLRAFTLQAAERDQQHAAAVAVVITDEGHGAELPGFPRHAAWSTQAALLLTRRAGHLRKH
AGQWALPGGRIDAGETAEQAALRELAEEVHLELDVSAILGRLDDFVTRSGFVITPVVVWAGAAQHIRPNPAEVASIHRIP
IAEFLRADAPMLADEGHGGHPVLRMPVGNHWIAAPTAAILYQFREVCIEGRPTRVAHFEQPAFAWK

Sequences:

>Translated_226_residues
MTDTSRNMQQDQHLRARIEEMLRAFTLQAAERDQQHAAAVAVVITDEGHGAELPGFPRHAAWSTQAALLLTRRAGHLRKH
AGQWALPGGRIDAGETAEQAALRELAEEVHLELDVSAILGRLDDFVTRSGFVITPVVVWAGAAQHIRPNPAEVASIHRIP
IAEFLRADAPMLADEGHGGHPVLRMPVGNHWIAAPTAAILYQFREVCIEGRPTRVAHFEQPAFAWK
>Mature_225_residues
TDTSRNMQQDQHLRARIEEMLRAFTLQAAERDQQHAAAVAVVITDEGHGAELPGFPRHAAWSTQAALLLTRRAGHLRKHA
GQWALPGGRIDAGETAEQAALRELAEEVHLELDVSAILGRLDDFVTRSGFVITPVVVWAGAAQHIRPNPAEVASIHRIPI
AEFLRADAPMLADEGHGGHPVLRMPVGNHWIAAPTAAILYQFREVCIEGRPTRVAHFEQPAFAWK

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI17536993, Length=104, Percent_Identity=36.5384615384615, Blast_Score=71, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 24857; Mature: 24725

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDTSRNMQQDQHLRARIEEMLRAFTLQAAERDQQHAAAVAVVITDEGHGAELPGFPRHA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCC
AWSTQAALLLTRRAGHLRKHAGQWALPGGRIDAGETAEQAALRELAEEVHLELDVSAILG
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH
RLDDFVTRSGFVITPVVVWAGAAQHIRPNPAEVASIHRIPIAEFLRADAPMLADEGHGGH
HHHHHHHCCCCEEHHHHHHCCCHHCCCCCHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCC
PVLRMPVGNHWIAAPTAAILYQFREVCIEGRPTRVAHFEQPAFAWK
CEEECCCCCCEEHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC
>Mature Secondary Structure 
TDTSRNMQQDQHLRARIEEMLRAFTLQAAERDQQHAAAVAVVITDEGHGAELPGFPRHA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCC
AWSTQAALLLTRRAGHLRKHAGQWALPGGRIDAGETAEQAALRELAEEVHLELDVSAILG
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH
RLDDFVTRSGFVITPVVVWAGAAQHIRPNPAEVASIHRIPIAEFLRADAPMLADEGHGGH
HHHHHHHCCCCEEHHHHHHCCCHHCCCCCHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCC
PVLRMPVGNHWIAAPTAAILYQFREVCIEGRPTRVAHFEQPAFAWK
CEEECCCCCCEEHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA