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The map label for this gene is 91787894

Identifier: 91787894

GI number: 91787894

Start: 2088795

End: 2089685

Strand: Reverse

Name: 91787894

Synonym: Bpro_2018

Alternate gene names: NA

Gene position: 2089685-2088795 (Counterclockwise)

Preceding gene: 91787895

Following gene: 91787893

Centisome position: 40.18

GC content: 64.98

Gene sequence:

>891_bases
ATGCCGGTCAAGTCCACGCCGTTGCCGGAAGGTCTGGCCACAACGAACGCAAGCACGGGTACCGCGCGCAAGGCGGGCGT
CGACCATTACGAGAACTTCCCGGTCGCTTCCGTCCTGTGCCCACCGCACCTGCGCCCCGCCATCGCGGCCATCTACTGGT
TCGCCCGCACCGCAGACGACATCGCCGACGAGGGCGATGCCCCGCCCCAGACCCGTCTGGACGATCTGGCCGCCTACCAT
GCCGACCTGATGGCGACCGCCGCCGGTCTCTCACCCTCCCCGCGCTGGGCCGCCGTGTTTGATCGCCTGGGTCCGGTGAT
CACGCAATTTGTCCTGCCGGTGCATTTGCTGGCCGACCTGCTCAGCGCCTTTGAGCAGGACGTGGTGAAGCAGCGCTATG
CCAGCCAGGCCGAACTGCTCGACTACTGCAGCCGCTCAGCCAACCCGGTGGGCCGTTTGCTGCTGCATCTTTATGGTGTG
CACGACGAAAGCTCGCTGCAAATGAGCGACTGCATCTGCAGCGCCCTGCAGCTCATCAACTTCTGGCAGGACCTGAGCGT
GGACATTCCGCGCGGACGCATCTACCTGCCGGCCGATGCCTGGGCGCGCCACGGCGTCGGCGAGGCGCAACTGCTGGCGC
TGGACAGCAACCCGGGAACTACCAATTTGATAGCAGATTGCGCCCAATCCGCAAGGGCTGCCATGCTCAAAGGCTCCCCG
CTGGTGAAAAGGATACCGGGACGCGGCGGCTGGGAACTGCGGATGGTGGTGCAAGGCGGCCTGCGCATCCTGGACAAAAT
TGAAGCGCTGAAGTTCAATACCCTGGCGCAGCGCCCCAAACTCGGGCCCTGGGATGTGGTGGTGATGGGATGGCGCGCAC
TGTGGATGTGA

Upstream 100 bases:

>100_bases
TCGGCATTGGGCTGTATGCCCGCACCGGAGCCTCGGAGGAAGCGACTTACCTCGCTGATTTCATGACCCGCATGCCGGGC
AGGCTGGCGGTTTGACGGGC

Downstream 100 bases:

>100_bases
GGGATGTGAGGGATCGGCGTGATGTGAGAAATATGCACATGTCCGCAGGACTGATTGCGTCATTTCCACGTGCAACAATC
GCCGCATGAATCCCGAGCAG

Product: squalene/phytoene synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 295

Protein sequence:

>296_residues
MPVKSTPLPEGLATTNASTGTARKAGVDHYENFPVASVLCPPHLRPAIAAIYWFARTADDIADEGDAPPQTRLDDLAAYH
ADLMATAAGLSPSPRWAAVFDRLGPVITQFVLPVHLLADLLSAFEQDVVKQRYASQAELLDYCSRSANPVGRLLLHLYGV
HDESSLQMSDCICSALQLINFWQDLSVDIPRGRIYLPADAWARHGVGEAQLLALDSNPGTTNLIADCAQSARAAMLKGSP
LVKRIPGRGGWELRMVVQGGLRILDKIEALKFNTLAQRPKLGPWDVVVMGWRALWM

Sequences:

>Translated_296_residues
MPVKSTPLPEGLATTNASTGTARKAGVDHYENFPVASVLCPPHLRPAIAAIYWFARTADDIADEGDAPPQTRLDDLAAYH
ADLMATAAGLSPSPRWAAVFDRLGPVITQFVLPVHLLADLLSAFEQDVVKQRYASQAELLDYCSRSANPVGRLLLHLYGV
HDESSLQMSDCICSALQLINFWQDLSVDIPRGRIYLPADAWARHGVGEAQLLALDSNPGTTNLIADCAQSARAAMLKGSP
LVKRIPGRGGWELRMVVQGGLRILDKIEALKFNTLAQRPKLGPWDVVVMGWRALWM
>Mature_295_residues
PVKSTPLPEGLATTNASTGTARKAGVDHYENFPVASVLCPPHLRPAIAAIYWFARTADDIADEGDAPPQTRLDDLAAYHA
DLMATAAGLSPSPRWAAVFDRLGPVITQFVLPVHLLADLLSAFEQDVVKQRYASQAELLDYCSRSANPVGRLLLHLYGVH
DESSLQMSDCICSALQLINFWQDLSVDIPRGRIYLPADAWARHGVGEAQLLALDSNPGTTNLIADCAQSARAAMLKGSPL
VKRIPGRGGWELRMVVQGGLRILDKIEALKFNTLAQRPKLGPWDVVVMGWRALWM

Specific function: Probably part of the operon y4aABCD involved in the synthesis of an isoprenoid compound [H]

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phytoene/squalene synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002060
- InterPro:   IPR017827
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00494 SQS_PSY [H]

EC number: NA

Molecular weight: Translated: 32269; Mature: 32138

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVKSTPLPEGLATTNASTGTARKAGVDHYENFPVASVLCPPHLRPAIAAIYWFARTADD
CCCCCCCCCCCCCCCCCCCCCHHHCCCCHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHH
IADEGDAPPQTRLDDLAAYHADLMATAAGLSPSPRWAAVFDRLGPVITQFVLPVHLLADL
HHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LSAFEQDVVKQRYASQAELLDYCSRSANPVGRLLLHLYGVHDESSLQMSDCICSALQLIN
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
FWQDLSVDIPRGRIYLPADAWARHGVGEAQLLALDSNPGTTNLIADCAQSARAAMLKGSP
HHHHCCCCCCCCEEEECCHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCC
LVKRIPGRGGWELRMVVQGGLRILDKIEALKFNTLAQRPKLGPWDVVVMGWRALWM
HHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
PVKSTPLPEGLATTNASTGTARKAGVDHYENFPVASVLCPPHLRPAIAAIYWFARTADD
CCCCCCCCCCCCCCCCCCCCHHHCCCCHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHH
IADEGDAPPQTRLDDLAAYHADLMATAAGLSPSPRWAAVFDRLGPVITQFVLPVHLLADL
HHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LSAFEQDVVKQRYASQAELLDYCSRSANPVGRLLLHLYGVHDESSLQMSDCICSALQLIN
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
FWQDLSVDIPRGRIYLPADAWARHGVGEAQLLALDSNPGTTNLIADCAQSARAAMLKGSP
HHHHCCCCCCCCEEEECCHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCC
LVKRIPGRGGWELRMVVQGGLRILDKIEALKFNTLAQRPKLGPWDVVVMGWRALWM
HHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]