| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787887
Identifier: 91787887
GI number: 91787887
Start: 2081266
End: 2082771
Strand: Direct
Name: 91787887
Synonym: Bpro_2011
Alternate gene names: NA
Gene position: 2081266-2082771 (Clockwise)
Preceding gene: 91787886
Following gene: 91787888
Centisome position: 40.02
GC content: 64.21
Gene sequence:
>1506_bases ATGGACATCTTCAACGCATTGATGGTCGGCTTTGCGGCCGCGATCACTCCAGCCAATCCTCTGTGGTGCCTCGTGGGTTG CGCCCTGGGCACGGCCGTGGGCGTGCTGCCCGGCATTGGCCCGGCCGTGGCTGTGGCCATGCTGCTGCCCATCACCGCCA AGGTCGACGTCACGGCCTCGATGATTTTCTTCTCGGGCATTTACTACGGTGCCATGTATGGTGGTTCGACGACCTCCATC CTGCTGAACACACCCGGCGAAACGGCGAGCATGGTCACTGCCATGGAGGGCAACAAGATGGCCAAGAGCGGCCGTGCGGG TGCAGCGCTGGCCACGGCGGCCATAGGCTCGTTTGTCGCCGGCACCATTGCCACCGTGATCGTCACGCTGTTCGCGCCCT TTGTGGCCGAGTTCGCGGTCAAGCTCGGCCCGCCTGAGTATTTCCTGCTCATGCTGCTGGCCTTCACCACCGTGAGTGCG GTGCTCGGCAAGAGCACGCTGCGCGGCATGACGGCGCTGTTCATCGGATTGGCGGCGGGCTGCGTCGGTCTCGACCAGAT TTCAGGCCAGGGCCGTTACACCGGCGGCATTCCGGAGTTTCTCGACGGCATTGAGATCGTGCTGGTGGCGGTCGGATTGT TCGCCGTGGCGGAAGTGCTGTACGCCGTGCTGTACGAAGGCCGGGTCGTGGAGGATCAGAACAGGCTGAGCCGTGTGCAC ATGACGGCGCGCGACTGGAAGCGCTCTATCCCCGCCTGGCTGCGCGGAACGGCCATCGGCGCCCCGTTTGGCTGCATCCC GGCCGGTGGGACCGAAATACCCACCTTCCTGAGCTATGCGATGGAAAAAAAGCTGGCCAAGGACCCGAAGGACAGGGCGG AGTTCGGCAGCACCGGCGCCATTGAAGGCGTGGCCGGACCCGAGGCCGCCAACAACGCCACCGTGACTGCCGCGCTGATT CCGCTGCTGACGCTCGGCATTCCCACCTCCAACACCACGGCCATTCTGCTGGGCGCTTTCCAGAACTACGGCATCCAGCC CGGCCCGCAGCTGTTCACCACCTCGGCGGCGCTGGTATGGGCGCTGATCGCCTCCCTCTACATTGGCAATGTGATGCTGC TGGTGCTGAACCTGCCGATGGTCGGGCTCTGGGTCAAGCTGCTCAAGATTCCGAAGCCGCAGCTGTATGCCGGCATCCTG ATCTTCGCAACGGTCGGGGCCTATGGCATGCGCCAAAGCGCGTTTGACCTGTTCCTGCTGTATGGCATCGGGCTGCTGGG TGTGGTGATGCGCCGCTTTGACTTTCCGACCGCACCGGTGGTCGTTGGCATGATTCTCGGGCCACTGGCAGAAGCGCAGT TGCGCAACGCCATGTCCATCGGCGAGGGCAGTGCCGTGGTGTTCTTCCAGCGCCCGATGTCCATCACGCTCATCGTGATC ATCGTGTCTGTGCTGGTGCTGCCGCGGCTGGCCAGGTACTGGGGGCCGCGCAAGCTCGCGGCATGA
Upstream 100 bases:
>100_bases ATCGTGACCGGCCTGCTCATTTCAGCGCCGGTGTTCTGGACGTCCACGCAATTCCTGGCCATCAACCTGCCCGGCCTGAC TTCGACGGGATGGTTCTGAC
Downstream 100 bases:
>100_bases CTTTTTCGTTGGGAAAACCTTAAAGATCTCTGGAGGAAAGCATGCTGAAGATTCAAAGACGCACCGCCCTGGGTGGGCTG GCCATCGCCGCAGTGGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: ORFZ2 [H]
Number of amino acids: Translated: 501; Mature: 501
Protein sequence:
>501_residues MDIFNALMVGFAAAITPANPLWCLVGCALGTAVGVLPGIGPAVAVAMLLPITAKVDVTASMIFFSGIYYGAMYGGSTTSI LLNTPGETASMVTAMEGNKMAKSGRAGAALATAAIGSFVAGTIATVIVTLFAPFVAEFAVKLGPPEYFLLMLLAFTTVSA VLGKSTLRGMTALFIGLAAGCVGLDQISGQGRYTGGIPEFLDGIEIVLVAVGLFAVAEVLYAVLYEGRVVEDQNRLSRVH MTARDWKRSIPAWLRGTAIGAPFGCIPAGGTEIPTFLSYAMEKKLAKDPKDRAEFGSTGAIEGVAGPEAANNATVTAALI PLLTLGIPTSNTTAILLGAFQNYGIQPGPQLFTTSAALVWALIASLYIGNVMLLVLNLPMVGLWVKLLKIPKPQLYAGIL IFATVGAYGMRQSAFDLFLLYGIGLLGVVMRRFDFPTAPVVVGMILGPLAEAQLRNAMSIGEGSAVVFFQRPMSITLIVI IVSVLVLPRLARYWGPRKLAA
Sequences:
>Translated_501_residues MDIFNALMVGFAAAITPANPLWCLVGCALGTAVGVLPGIGPAVAVAMLLPITAKVDVTASMIFFSGIYYGAMYGGSTTSI LLNTPGETASMVTAMEGNKMAKSGRAGAALATAAIGSFVAGTIATVIVTLFAPFVAEFAVKLGPPEYFLLMLLAFTTVSA VLGKSTLRGMTALFIGLAAGCVGLDQISGQGRYTGGIPEFLDGIEIVLVAVGLFAVAEVLYAVLYEGRVVEDQNRLSRVH MTARDWKRSIPAWLRGTAIGAPFGCIPAGGTEIPTFLSYAMEKKLAKDPKDRAEFGSTGAIEGVAGPEAANNATVTAALI PLLTLGIPTSNTTAILLGAFQNYGIQPGPQLFTTSAALVWALIASLYIGNVMLLVLNLPMVGLWVKLLKIPKPQLYAGIL IFATVGAYGMRQSAFDLFLLYGIGLLGVVMRRFDFPTAPVVVGMILGPLAEAQLRNAMSIGEGSAVVFFQRPMSITLIVI IVSVLVLPRLARYWGPRKLAA >Mature_501_residues MDIFNALMVGFAAAITPANPLWCLVGCALGTAVGVLPGIGPAVAVAMLLPITAKVDVTASMIFFSGIYYGAMYGGSTTSI LLNTPGETASMVTAMEGNKMAKSGRAGAALATAAIGSFVAGTIATVIVTLFAPFVAEFAVKLGPPEYFLLMLLAFTTVSA VLGKSTLRGMTALFIGLAAGCVGLDQISGQGRYTGGIPEFLDGIEIVLVAVGLFAVAEVLYAVLYEGRVVEDQNRLSRVH MTARDWKRSIPAWLRGTAIGAPFGCIPAGGTEIPTFLSYAMEKKLAKDPKDRAEFGSTGAIEGVAGPEAANNATVTAALI PLLTLGIPTSNTTAILLGAFQNYGIQPGPQLFTTSAALVWALIASLYIGNVMLLVLNLPMVGLWVKLLKIPKPQLYAGIL IFATVGAYGMRQSAFDLFLLYGIGLLGVVMRRFDFPTAPVVVGMILGPLAEAQLRNAMSIGEGSAVVFFQRPMSITLIVI IVSVLVLPRLARYWGPRKLAA
Specific function: Unknown
COG id: COG3333
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002823 [H]
Pfam domain/function: PF01970 DUF112 [H]
EC number: NA
Molecular weight: Translated: 52378; Mature: 52378
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIFNALMVGFAAAITPANPLWCLVGCALGTAVGVLPGIGPAVAVAMLLPITAKVDVTAS CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHH MIFFSGIYYGAMYGGSTTSILLNTPGETASMVTAMEGNKMAKSGRAGAALATAAIGSFVA HHHHHHHHHHHEECCCCCEEEEECCCCHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHH GTIATVIVTLFAPFVAEFAVKLGPPEYFLLMLLAFTTVSAVLGKSTLRGMTALFIGLAAG HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CVGLDQISGQGRYTGGIPEFLDGIEIVLVAVGLFAVAEVLYAVLYEGRVVEDQNRLSRVH HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHH MTARDWKRSIPAWLRGTAIGAPFGCIPAGGTEIPTFLSYAMEKKLAKDPKDRAEFGSTGA HHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCC IEGVAGPEAANNATVTAALIPLLTLGIPTSNTTAILLGAFQNYGIQPGPQLFTTSAALVW CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECHHHCCCCCCCHHHHHHHHHHH ALIASLYIGNVMLLVLNLPMVGLWVKLLKIPKPQLYAGILIFATVGAYGMRQSAFDLFLL HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH YGIGLLGVVMRRFDFPTAPVVVGMILGPLAEAQLRNAMSIGEGSAVVFFQRPMSITLIVI HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHH IVSVLVLPRLARYWGPRKLAA HHHHHHHHHHHHHCCCHHCCC >Mature Secondary Structure MDIFNALMVGFAAAITPANPLWCLVGCALGTAVGVLPGIGPAVAVAMLLPITAKVDVTAS CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHH MIFFSGIYYGAMYGGSTTSILLNTPGETASMVTAMEGNKMAKSGRAGAALATAAIGSFVA HHHHHHHHHHHEECCCCCEEEEECCCCHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHH GTIATVIVTLFAPFVAEFAVKLGPPEYFLLMLLAFTTVSAVLGKSTLRGMTALFIGLAAG HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CVGLDQISGQGRYTGGIPEFLDGIEIVLVAVGLFAVAEVLYAVLYEGRVVEDQNRLSRVH HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHH MTARDWKRSIPAWLRGTAIGAPFGCIPAGGTEIPTFLSYAMEKKLAKDPKDRAEFGSTGA HHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCC IEGVAGPEAANNATVTAALIPLLTLGIPTSNTTAILLGAFQNYGIQPGPQLFTTSAALVW CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECHHHCCCCCCCHHHHHHHHHHH ALIASLYIGNVMLLVLNLPMVGLWVKLLKIPKPQLYAGILIFATVGAYGMRQSAFDLFLL HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH YGIGLLGVVMRRFDFPTAPVVVGMILGPLAEAQLRNAMSIGEGSAVVFFQRPMSITLIVI HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHH IVSVLVLPRLARYWGPRKLAA HHHHHHHHHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8672817 [H]