Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yjgR [H]

Identifier: 91787842

GI number: 91787842

Start: 2033566

End: 2035083

Strand: Reverse

Name: yjgR [H]

Synonym: Bpro_1966

Alternate gene names: 91787842

Gene position: 2035083-2033566 (Counterclockwise)

Preceding gene: 91787854

Following gene: 91787841

Centisome position: 39.13

GC content: 64.62

Gene sequence:

>1518_bases
ATGGTCGAACCCTTATTGATTGCCAGAAACGCGTCTGTCCATTGTGAGCTTATTCCGGGGCTTGCCAACCGCCACGGCCT
GATTACCGGCGCCACCGGGACGGGCAAGACCGTCACGCTGCAGACGCTGGCTGAAAATTTCTCGAAAATCGGCGTGCCCG
TCTTCATGGCGGACGTCAAGGGTGACCTGACCGGCATCAGCCAGGCCGGCAGCATTGGTGAAAAAATGGCCGGCATCCTC
AAGGAGCGCGGCATTGAGACGCCAGAACCCCTGGCCTGCCCCGCCACGCTGTGGGACGTCTTCGGCGAGCAGGGGCACCC
CGTTCGCGCCACCGTGTCCGACATGGGCCCGCTGCTGCTGGGCCGCATGCTCAACCTCAACGAGACCCAGGCCGGCGTGC
TCAACCTGGTGTTCAAGATCGCCGACGACAACGGCCTGCTGCTGCTGGACCTGAAGGACCTGCGGGCCATGCTGCAGTAT
GTGGGCGACAACGCCGGCCAGTTCACCACGCAATACGGCAACGTCAGCGCCGCCAGCGTGGGCGCCATTCAGCGTGGCCT
GATGCAGATCGAAAGCCAGGGCGCAGACAAGTTCTTTGGCGAGCCCATGCTCAACATCAGCGACTTCATGCAGACCGACG
GCGCCGGGCACGGGATGATCAACATCCTGGCGGCCGACCGGCTGATGAATTCGCCGCGCCTGTACGCCACCTTCCTGCTG
TGGATGCTGTCCGAGCTGTTCGAGCAACTGCCCGAAATCGGCGACCCTGAAAAACCCAAGCTGGTGTTCTTCTTTGACGA
AGCGCATTTGCTGTTCAACGAAGCCCCCAAGGTGCTGGTTGAGCGCATCGAGCTGGTGGTGCGCCTGGTGCGCTCCAAGG
GCGTGGGCGTGTATTTTGTGACGCAAAACCCGCTGGACATTCCCGACTCCGTCCTGGCCCAGCTGGGCAACCGGGTGCAG
CACGCCCTGCGCGCCTTCACGCCTCGCGACCAGAAAGCCGTCAAGGCGACCGCCCAGACCATGCGGCAAAAGCCCGGGCT
GGACATCGAGACCGCCATTACCGAGCTGGCCGTGGGCGAGGCGCTGGTGAGCTTTCTCGACAGCAAGGGCCGCCCCAGCA
TCACCGAGCGCGTCTATGTGCTGCCTCCGGGTAGCCAGATCGGCCCGATCACCCCGCAACAACGCCAGTCGCTGCTGCAA
AATTCGCTGGTCGCGGGCGTCTACGAAAAAGAAGTCGACCGCGAGTCCGCTTACGAAAAAATCAAGGACCGCGCCGATGC
GGCGGCCGAAGCGGCTGCAAAAGCTCCCGGTGGCGGCGCGGCGGGCGAGTCTGCCTCGGGCGGCATTCTGGGTGGCCTGA
ACGACGTACTCTTTGGCAGCACCGGGCCGCGCGGCGGCCGGCATGAAGGCCTGGCGCAGAGCATGGCCAAGTCCGCCGTC
CGCACCATGGGCTCCGCCGTGGGGCGAGAGATCATCCGCGGCGTGCTGGGCGGTATCTTTGGCGGCAAGCGGCGCTGA

Upstream 100 bases:

>100_bases
TCCATCATTTTACTTTTAGGAAGCGCTGCATAGCCCCCGCGAGGCCCTGCAGCCCGGATCGGGATGAGCTGCAAGCTTCC
TTACACCCCAGGACACTGCC

Downstream 100 bases:

>100_bases
AACAGCATGGCCGGCAATAGCGCGGCTCCCTTTCAAGTTCATCAACCAGCGACACACTGCCCCGCATGCGGCATGCGGCA
TGCGGCATGCGGCATGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 505; Mature: 505

Protein sequence:

>505_residues
MVEPLLIARNASVHCELIPGLANRHGLITGATGTGKTVTLQTLAENFSKIGVPVFMADVKGDLTGISQAGSIGEKMAGIL
KERGIETPEPLACPATLWDVFGEQGHPVRATVSDMGPLLLGRMLNLNETQAGVLNLVFKIADDNGLLLLDLKDLRAMLQY
VGDNAGQFTTQYGNVSAASVGAIQRGLMQIESQGADKFFGEPMLNISDFMQTDGAGHGMINILAADRLMNSPRLYATFLL
WMLSELFEQLPEIGDPEKPKLVFFFDEAHLLFNEAPKVLVERIELVVRLVRSKGVGVYFVTQNPLDIPDSVLAQLGNRVQ
HALRAFTPRDQKAVKATAQTMRQKPGLDIETAITELAVGEALVSFLDSKGRPSITERVYVLPPGSQIGPITPQQRQSLLQ
NSLVAGVYEKEVDRESAYEKIKDRADAAAEAAAKAPGGGAAGESASGGILGGLNDVLFGSTGPRGGRHEGLAQSMAKSAV
RTMGSAVGREIIRGVLGGIFGGKRR

Sequences:

>Translated_505_residues
MVEPLLIARNASVHCELIPGLANRHGLITGATGTGKTVTLQTLAENFSKIGVPVFMADVKGDLTGISQAGSIGEKMAGIL
KERGIETPEPLACPATLWDVFGEQGHPVRATVSDMGPLLLGRMLNLNETQAGVLNLVFKIADDNGLLLLDLKDLRAMLQY
VGDNAGQFTTQYGNVSAASVGAIQRGLMQIESQGADKFFGEPMLNISDFMQTDGAGHGMINILAADRLMNSPRLYATFLL
WMLSELFEQLPEIGDPEKPKLVFFFDEAHLLFNEAPKVLVERIELVVRLVRSKGVGVYFVTQNPLDIPDSVLAQLGNRVQ
HALRAFTPRDQKAVKATAQTMRQKPGLDIETAITELAVGEALVSFLDSKGRPSITERVYVLPPGSQIGPITPQQRQSLLQ
NSLVAGVYEKEVDRESAYEKIKDRADAAAEAAAKAPGGGAAGESASGGILGGLNDVLFGSTGPRGGRHEGLAQSMAKSAV
RTMGSAVGREIIRGVLGGIFGGKRR
>Mature_505_residues
MVEPLLIARNASVHCELIPGLANRHGLITGATGTGKTVTLQTLAENFSKIGVPVFMADVKGDLTGISQAGSIGEKMAGIL
KERGIETPEPLACPATLWDVFGEQGHPVRATVSDMGPLLLGRMLNLNETQAGVLNLVFKIADDNGLLLLDLKDLRAMLQY
VGDNAGQFTTQYGNVSAASVGAIQRGLMQIESQGADKFFGEPMLNISDFMQTDGAGHGMINILAADRLMNSPRLYATFLL
WMLSELFEQLPEIGDPEKPKLVFFFDEAHLLFNEAPKVLVERIELVVRLVRSKGVGVYFVTQNPLDIPDSVLAQLGNRVQ
HALRAFTPRDQKAVKATAQTMRQKPGLDIETAITELAVGEALVSFLDSKGRPSITERVYVLPPGSQIGPITPQQRQSLLQ
NSLVAGVYEKEVDRESAYEKIKDRADAAAEAAAKAPGGGAAGESASGGILGGLNDVLFGSTGPRGGRHEGLAQSMAKSAV
RTMGSAVGREIIRGVLGGIFGGKRR

Specific function: Unknown

COG id: COG0433

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjiB [H]

Homologues:

Organism=Escherichia coli, GI1790714, Length=505, Percent_Identity=64.3564356435644, Blast_Score=648, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008571 [H]

Pfam domain/function: PF05872 DUF853 [H]

EC number: NA

Molecular weight: Translated: 53877; Mature: 53877

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEPLLIARNASVHCELIPGLANRHGLITGATGTGKTVTLQTLAENFSKIGVPVFMADVK
CCCCEEEECCCCEEEEECCCCCCCCCEEEECCCCCCEEEHHHHHHHHHHCCCCEEEEECC
GDLTGISQAGSIGEKMAGILKERGIETPEPLACPATLWDVFGEQGHPVRATVSDMGPLLL
CCHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCEEEEHHHHHHHHH
GRMLNLNETQAGVLNLVFKIADDNGLLLLDLKDLRAMLQYVGDNAGQFTTQYGNVSAASV
HHHCCCCCHHHHHHHHHHEEECCCCEEEEEHHHHHHHHHHHCCCCCCEEEECCCCCHHHH
GAIQRGLMQIESQGADKFFGEPMLNISDFMQTDGAGHGMINILAADRLMNSPRLYATFLL
HHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHH
WMLSELFEQLPEIGDPEKPKLVFFFDEAHLLFNEAPKVLVERIELVVRLVRSKGVGVYFV
HHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
TQNPLDIPDSVLAQLGNRVQHALRAFTPRDQKAVKATAQTMRQKPGLDIETAITELAVGE
ECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
ALVSFLDSKGRPSITERVYVLPPGSQIGPITPQQRQSLLQNSLVAGVYEKEVDRESAYEK
HHHHHHCCCCCCCHHCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKDRADAAAEAAAKAPGGGAAGESASGGILGGLNDVLFGSTGPRGGRHEGLAQSMAKSAV
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHH
RTMGSAVGREIIRGVLGGIFGGKRR
HHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVEPLLIARNASVHCELIPGLANRHGLITGATGTGKTVTLQTLAENFSKIGVPVFMADVK
CCCCEEEECCCCEEEEECCCCCCCCCEEEECCCCCCEEEHHHHHHHHHHCCCCEEEEECC
GDLTGISQAGSIGEKMAGILKERGIETPEPLACPATLWDVFGEQGHPVRATVSDMGPLLL
CCHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCEEEEHHHHHHHHH
GRMLNLNETQAGVLNLVFKIADDNGLLLLDLKDLRAMLQYVGDNAGQFTTQYGNVSAASV
HHHCCCCCHHHHHHHHHHEEECCCCEEEEEHHHHHHHHHHHCCCCCCEEEECCCCCHHHH
GAIQRGLMQIESQGADKFFGEPMLNISDFMQTDGAGHGMINILAADRLMNSPRLYATFLL
HHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHH
WMLSELFEQLPEIGDPEKPKLVFFFDEAHLLFNEAPKVLVERIELVVRLVRSKGVGVYFV
HHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
TQNPLDIPDSVLAQLGNRVQHALRAFTPRDQKAVKATAQTMRQKPGLDIETAITELAVGE
ECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
ALVSFLDSKGRPSITERVYVLPPGSQIGPITPQQRQSLLQNSLVAGVYEKEVDRESAYEK
HHHHHHCCCCCCCHHCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKDRADAAAEAAAKAPGGGAAGESASGGILGGLNDVLFGSTGPRGGRHEGLAQSMAKSAV
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHH
RTMGSAVGREIIRGVLGGIFGGKRR
HHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]