| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787840
Identifier: 91787840
GI number: 91787840
Start: 2030584
End: 2031900
Strand: Reverse
Name: 91787840
Synonym: Bpro_1964
Alternate gene names: NA
Gene position: 2031900-2030584 (Counterclockwise)
Preceding gene: 91787841
Following gene: 91787839
Centisome position: 39.07
GC content: 67.81
Gene sequence:
>1317_bases ATGAAAAAAATAGCTGGTGACGCCCAACTGCTGTCGGCTGCGGCCGAACTACGGTCTACAGAAACGATACGGACGCGGGC CCGGGGCCTGCTCGAACGAGCACGCCGCGGCGAGTCGGCCTGGTTCACCGTCAACGACGGGGCGCTGGACACGGCCGCCG TGTTGGTCGCCGAACTGACCCGCGCCCGCTACCCCGATCTGAAGATTCCGTACCACAGCCGGTGGCGGCATTTTGAAGCT GGCGGCGTGGACCGGACCGGTCAGTTAAACGCGGCGCTGGCACAGGTTTCGGCGGCCGAACGGGCACGCGCCCAGATCGA CCTGGCCCTGGTCAGCGTGCTGCTGGATGCCGGCGCCGGCCCCGACTGGACCTACCGGGAGCCCGCGCAGGCGGAACACC CCGGGCACGAATACAGCCGGTCGGAAGGTTTGGGCGTGGCCAGCTTCCACGCCTTCATGGCGGGCCTGTTTTCCAGTGAC CCATCGCGACCCTTGCAGGCGGATGCCCAGGGTCTGCAAGCCGTCACGGCCGAACGGCTGGGCCAGGCCTTCCAGGTCAC GGCGAGCAACCCGCTGGTGGGCCTGGAGGGGCGTGCGGCCCTGCTGCGCCGTCTCGGGCAGGCGCTGCAGGACCAACCCG CCGTGTTTGGCCGGCCCGCTCGCCCCGGCCATCTGTTCGACATGCTGGTCAACAAGTCGCCTCAGCCTGCGCCTGCGGAA CAAAGCGCTCAGGAGGCGCAGCCCACCATCCTCGCGCATGAACTGCTGTCCGTGCTGTTGACGGCGCTGGCGCCCATCTG GCCCGCGCAGAACGCCATTGAAAACATCGCACTGGGAGACTGCTGGCGCCACGTTGCCGCGTGCAGCGGCAGCGTAGCCA AGGGCGCGGCGGCCAGCCTCACCGACGGCTGGATGCCGTTTCACAAACTGTCGCAGTGGCTCGCCTATTCGCTGCTGGAG CCGTTTGAATGGGCCGGCATTCGTGTGCAAGGGCTGGACGCCTTGACCGGGCTGCCCGAATACCGCAACGGCGGCCTGTT CCTGGACGCTGGCGTGCTGCGCCTGAAAGACCCCTCGCAGGCGGACCAGCTGCACGCGGCCAGTGATGAGCTGATTGTGG AGTGGCGCGCGCTGACTGTCGCCCTGCTGGACGAACTGGCACCACTGGTTCGCGAGCAGTTAGGATTGACCGCTGAGCAG ATGCCGCTGGCCTGCGTGCTCGAGGGTGGCACCTGGGCCGCCGGGCGGGCACTGGCACAGCAACTGCACGGCGGCAAGCC GCCCCTGAACATCCAGAGCGACGGCACCGTTTTTTGA
Upstream 100 bases:
>100_bases CTATTTCACGCCGGGGCCGGTGCCCGACGCCGAAGAGCTCAAAAAGGCCAAGGGACGGGAACTTGATACCTGAGCCCCTG ATTTCACGGACACATCAGCC
Downstream 100 bases:
>100_bases ACACCGCTTTTGAATAAAGCACATCGCAACATGACCACTCGCAACGACAAAGTCCACGTCATTGACCATCCGCTCGTGCA GCACAAGCTCACGCTGATGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 438; Mature: 438
Protein sequence:
>438_residues MKKIAGDAQLLSAAAELRSTETIRTRARGLLERARRGESAWFTVNDGALDTAAVLVAELTRARYPDLKIPYHSRWRHFEA GGVDRTGQLNAALAQVSAAERARAQIDLALVSVLLDAGAGPDWTYREPAQAEHPGHEYSRSEGLGVASFHAFMAGLFSSD PSRPLQADAQGLQAVTAERLGQAFQVTASNPLVGLEGRAALLRRLGQALQDQPAVFGRPARPGHLFDMLVNKSPQPAPAE QSAQEAQPTILAHELLSVLLTALAPIWPAQNAIENIALGDCWRHVAACSGSVAKGAAASLTDGWMPFHKLSQWLAYSLLE PFEWAGIRVQGLDALTGLPEYRNGGLFLDAGVLRLKDPSQADQLHAASDELIVEWRALTVALLDELAPLVREQLGLTAEQ MPLACVLEGGTWAAGRALAQQLHGGKPPLNIQSDGTVF
Sequences:
>Translated_438_residues MKKIAGDAQLLSAAAELRSTETIRTRARGLLERARRGESAWFTVNDGALDTAAVLVAELTRARYPDLKIPYHSRWRHFEA GGVDRTGQLNAALAQVSAAERARAQIDLALVSVLLDAGAGPDWTYREPAQAEHPGHEYSRSEGLGVASFHAFMAGLFSSD PSRPLQADAQGLQAVTAERLGQAFQVTASNPLVGLEGRAALLRRLGQALQDQPAVFGRPARPGHLFDMLVNKSPQPAPAE QSAQEAQPTILAHELLSVLLTALAPIWPAQNAIENIALGDCWRHVAACSGSVAKGAAASLTDGWMPFHKLSQWLAYSLLE PFEWAGIRVQGLDALTGLPEYRNGGLFLDAGVLRLKDPSQADQLHAASDELIVEWRALTVALLDELAPLVREQLGLTAEQ MPLACVLEGGTWAAGRALAQQLHGGKPPLNIQSDGTVF >Mature_438_residues MKKIAGDAQLLSAAAELRSTETIRTRARGLLERARRGESAWFTVNDGALDTAAVLVAELTRARYPDLKIPYHSRWRHFEA GGVDRTGQLNAALAQVSAAERARAQIDLALVSVLLDAGAGPDWTYREPAQAEHPGHEYSRSEGLGVASFHAFMAGLFSSD PSRPLQADAQGLQAVTAERLGQAFQVTASNPLVGLEGRAALLRRLGQALQDQPAVFGRPARPGHLFDMLVNKSPQPAPAE QSAQEAQPTILAHELLSVLLTALAPIWPAQNAIENIALGDCWRHVAACSGSVAKGAAASLTDGWMPFHKLSQWLAYSLLE PFEWAGIRVQGLDALTGLPEYRNGGLFLDAGVLRLKDPSQADQLHAASDELIVEWRALTVALLDELAPLVREQLGLTAEQ MPLACVLEGGTWAAGRALAQQLHGGKPPLNIQSDGTVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46951; Mature: 46951
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIAGDAQLLSAAAELRSTETIRTRARGLLERARRGESAWFTVNDGALDTAAVLVAELT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHH RARYPDLKIPYHSRWRHFEAGGVDRTGQLNAALAQVSAAERARAQIDLALVSVLLDAGAG HHCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PDWTYREPAQAEHPGHEYSRSEGLGVASFHAFMAGLFSSDPSRPLQADAQGLQAVTAERL CCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHC GQAFQVTASNPLVGLEGRAALLRRLGQALQDQPAVFGRPARPGHLFDMLVNKSPQPAPAE CCEEEEECCCCEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCH QSAQEAQPTILAHELLSVLLTALAPIWPAQNAIENIALGDCWRHVAACSGSVAKGAAASL HHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHH TDGWMPFHKLSQWLAYSLLEPFEWAGIRVQGLDALTGLPEYRNGGLFLDAGVLRLKDPSQ CCCCCCHHHHHHHHHHHHHCCHHHCCEEEECCHHHHCCCCCCCCCEEEECCEEEECCCCH ADQLHAASDELIVEWRALTVALLDELAPLVREQLGLTAEQMPLACVLEGGTWAAGRALAQ HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEEECCCCCHHHHHHHH QLHGGKPPLNIQSDGTVF HHCCCCCCCCCCCCCCCC >Mature Secondary Structure MKKIAGDAQLLSAAAELRSTETIRTRARGLLERARRGESAWFTVNDGALDTAAVLVAELT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHH RARYPDLKIPYHSRWRHFEAGGVDRTGQLNAALAQVSAAERARAQIDLALVSVLLDAGAG HHCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PDWTYREPAQAEHPGHEYSRSEGLGVASFHAFMAGLFSSDPSRPLQADAQGLQAVTAERL CCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHC GQAFQVTASNPLVGLEGRAALLRRLGQALQDQPAVFGRPARPGHLFDMLVNKSPQPAPAE CCEEEEECCCCEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCH QSAQEAQPTILAHELLSVLLTALAPIWPAQNAIENIALGDCWRHVAACSGSVAKGAAASL HHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHH TDGWMPFHKLSQWLAYSLLEPFEWAGIRVQGLDALTGLPEYRNGGLFLDAGVLRLKDPSQ CCCCCCHHHHHHHHHHHHHCCHHHCCEEEECCHHHHCCCCCCCCCEEEECCEEEECCCCH ADQLHAASDELIVEWRALTVALLDELAPLVREQLGLTAEQMPLACVLEGGTWAAGRALAQ HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCEEEEECCCCCHHHHHHHH QLHGGKPPLNIQSDGTVF HHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA