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The map label for this gene is lpsJ [H]

Identifier: 91787785

GI number: 91787785

Start: 1966317

End: 1966952

Strand: Direct

Name: lpsJ [H]

Synonym: Bpro_1906

Alternate gene names: 91787785

Gene position: 1966317-1966952 (Clockwise)

Preceding gene: 91787784

Following gene: 91787789

Centisome position: 37.81

GC content: 60.53

Gene sequence:

>636_bases
ATGCCTTGGACCCAAGACCAGATGGCGGCACGCGCCGCCCAGGAACTCGAAGACGGTTTTTACGTGAACCTCGGCATCGG
CATCCCGACCCTGGTGGCCAATTTCACCGGCGACAAGGAAGTGTGGCTGCAGTCGGAAAACGGCATGCTCGGGATCGGCG
CGTTCCCCACCGAAGATCAGGTTGATGCGGACCTGATCAATGCCGGCAAGCAGACGGTTACCACCATCAAGGGGTCGTCG
ATTTTTGGCAGCCATGAAAGCTTCGCGATGATTCGCGGTGGAAAAATCAACCTGTCCATTCTGGGCGCCATGCAGGTCAG
TGAAAAGGGCGACCTGGCCAACTGGATGATTCCGGGCAAGATGGTCAAGGGCATGGGCGGCGCCATGGACCTGGTGGCCG
GTGTGAAGCGCGTGATCGTCCTGATGGAGCATGTCGCCCGCAAGAAAGACGGCACCGAGGACATGAAGATCCTGCCGCAC
TGCACGCTGCCCCTGACGGGTGTGGGCGTGGTCGACCGCATCATCACCGATCTGGCGGTGATGGACGTGACGCCGCAGGG
CCTGAAGGTGATGGAGCTTGCGCCAGGCGTGACGAGAGAGTCGCTGCAGGCGAAAACCGGCGTCAAGCTGATTTAA

Upstream 100 bases:

>100_bases
TCCACCTGCCGGGCATTTACGTGCACCGCATCGTGCTCAATGCGCACCCCGAGAAGCGCATTGAAAAGCGGACCATTACC
GAGAAAGCAGGAGTTTGACC

Downstream 100 bases:

>100_bases
TCTGATCTGATCGGGCTCAGCCTGAAAGCCGCCGGCCTCGACGCAACGTCAGGCGGCGGCTTTTTTGCGTTTGACGGGCG
CTGCGGTGTTGGCCGGCTTC

Product: butyryl-CoA:acetate CoA transferase

Products: NA

Alternate protein names: OXCT B; Succinyl CoA:3-oxoacid CoA-transferase [H]

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MPWTQDQMAARAAQELEDGFYVNLGIGIPTLVANFTGDKEVWLQSENGMLGIGAFPTEDQVDADLINAGKQTVTTIKGSS
IFGSHESFAMIRGGKINLSILGAMQVSEKGDLANWMIPGKMVKGMGGAMDLVAGVKRVIVLMEHVARKKDGTEDMKILPH
CTLPLTGVGVVDRIITDLAVMDVTPQGLKVMELAPGVTRESLQAKTGVKLI

Sequences:

>Translated_211_residues
MPWTQDQMAARAAQELEDGFYVNLGIGIPTLVANFTGDKEVWLQSENGMLGIGAFPTEDQVDADLINAGKQTVTTIKGSS
IFGSHESFAMIRGGKINLSILGAMQVSEKGDLANWMIPGKMVKGMGGAMDLVAGVKRVIVLMEHVARKKDGTEDMKILPH
CTLPLTGVGVVDRIITDLAVMDVTPQGLKVMELAPGVTRESLQAKTGVKLI
>Mature_210_residues
PWTQDQMAARAAQELEDGFYVNLGIGIPTLVANFTGDKEVWLQSENGMLGIGAFPTEDQVDADLINAGKQTVTTIKGSSI
FGSHESFAMIRGGKINLSILGAMQVSEKGDLANWMIPGKMVKGMGGAMDLVAGVKRVIVLMEHVARKKDGTEDMKILPHC
TLPLTGVGVVDRIITDLAVMDVTPQGLKVMELAPGVTRESLQAKTGVKLI

Specific function: SHORT-CHAIN FATTY ACIDS METABOLISM. [C]

COG id: COG2057

COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 3-oxoacid CoA-transferase subunit B family [H]

Homologues:

Organism=Homo sapiens, GI4557817, Length=209, Percent_Identity=56.9377990430622, Blast_Score=224, Evalue=3e-59,
Organism=Homo sapiens, GI11545841, Length=203, Percent_Identity=60.0985221674877, Blast_Score=222, Evalue=2e-58,
Organism=Escherichia coli, GI1788552, Length=207, Percent_Identity=47.3429951690821, Blast_Score=178, Evalue=3e-46,
Organism=Caenorhabditis elegans, GI17531517, Length=210, Percent_Identity=56.1904761904762, Blast_Score=221, Evalue=2e-58,
Organism=Drosophila melanogaster, GI21358325, Length=209, Percent_Identity=57.4162679425837, Blast_Score=223, Evalue=1e-58,
Organism=Drosophila melanogaster, GI24655794, Length=209, Percent_Identity=57.4162679425837, Blast_Score=222, Evalue=2e-58,

Paralogues:

None

Copy number: 369 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012791
- InterPro:   IPR004165
- InterPro:   IPR004164 [H]

Pfam domain/function: PF01144 CoA_trans [H]

EC number: =2.8.3.5 [H]

Molecular weight: Translated: 22536; Mature: 22404

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPWTQDQMAARAAQELEDGFYVNLGIGIPTLVANFTGDKEVWLQSENGMLGIGAFPTEDQ
CCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCCCCCEEEEECCCCEEEECCCCCCCC
VDADLINAGKQTVTTIKGSSIFGSHESFAMIRGGKINLSILGAMQVSEKGDLANWMIPGK
CCHHHHHCCCCEEEEEECCCEECCCCCEEEEECCEEEEEEEEEEEECCCCCCCEEECCHH
MVKGMGGAMDLVAGVKRVIVLMEHVARKKDGTEDMKILPHCTLPLTGVGVVDRIITDLAV
HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHH
MDVTPQGLKVMELAPGVTRESLQAKTGVKLI
CCCCCCCCEEEEECCCCCHHHHHHCCCCCCC
>Mature Secondary Structure 
PWTQDQMAARAAQELEDGFYVNLGIGIPTLVANFTGDKEVWLQSENGMLGIGAFPTEDQ
CCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHCCCCCCEEEEECCCCEEEECCCCCCCC
VDADLINAGKQTVTTIKGSSIFGSHESFAMIRGGKINLSILGAMQVSEKGDLANWMIPGK
CCHHHHHCCCCEEEEEECCCEECCCCCEEEEECCEEEEEEEEEEEECCCCCCCEEECCHH
MVKGMGGAMDLVAGVKRVIVLMEHVARKKDGTEDMKILPHCTLPLTGVGVVDRIITDLAV
HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHH
MDVTPQGLKVMELAPGVTRESLQAKTGVKLI
CCCCCCCCEEEEECCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9385134 [H]