| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is galE [C]
Identifier: 91787751
GI number: 91787751
Start: 1933849
End: 1934874
Strand: Reverse
Name: galE [C]
Synonym: Bpro_1872
Alternate gene names: 91787751
Gene position: 1934874-1933849 (Counterclockwise)
Preceding gene: 91787752
Following gene: 91787750
Centisome position: 37.21
GC content: 65.5
Gene sequence:
>1026_bases ATGAACATCGTCATCACAGGCGGCGCCGGATTCCTGGGCGCCCGACTCGCCCGCGAGCTTCTCAAGCGAGGCCAGCTTGC ACTGGCAGGCGCCACACCGAAAACCATTCAGACCATCACACTGGTGGACCGTGCGGCACCGCCCGCGGATCTGGCGGCAG ACAGGCGAATACGCCAGGTGGTGGGCGACCTGAACCAGCTCCTGGAAGGAGACCCGGCCGCAACTCCTGTCGTACGGGCG GAAGACGCTATCGTTTTTCATCTGGCCGCGGCCGTCAGCGGCGAGTGCGAGGCTGATTTCGACCTCGGCATGCGCAGCAA TCTGGACGCCACGCGGGCCCTGCTCCAGACCTGCCGCGCGCTGAAAACATCCCCCACCGTCGTATTTGCCAGCTCACTCG CCGTCTTCGGCAATTCGCCAGAGCACCCCCTGCCCGCGGTGATTGACGACACGACGCTGCCCACGCCGCAAAACAGCTAT GGCATCCAGAAATTCATCGGCGAGCAGCTGGTAGCCGACTACGCGCGCAAGGGCTTCATCCGGGGCCGCAATGTGCGCCT GATGACCGTCAGCGTGCGGCCCGGCAGGCCCAATGCTGCGGCGTCCAGCTTTCTGAGCGGCATGATCCGCGAGCCGCTGG CTGGCGTGCGGGTGGCCTGTCCGGTCCCGCCGGAAACGGCCGTGGCCCTGTCGTCGCCAGGCCGCACGATTGATGGGTTG ATACGGGCGGCGCAAGCGAGCGATGCCGAATGGGGCGCCCGCACCGCCATCAACCTGCCGGCGCTCAAAACGACGGCTGG CGAGATGGCCGCCGCGCTGGAACGCGTGGCAGGCAAGCAGGTTGCGGCACTGATCGACTGGACGCCGGACGCTGCGGTTG CAAAAATCGTCACCAGCTGGCCCGCCCACATCAATGCCGTACGCGCCCGCGAGCTCGGATTGCTGCCCGACCCCGACTTT GAAACCATTATTCGTAACTATGTGCTCGAAAACCCCAGTGTGGCGACTCTGGCCGAACGGACATAA
Upstream 100 bases:
>100_bases CAGTGCCGCCATGTACCGCTCCGCAGGGCACGCCCATGTGTCCGGCTGGCGGGCGCGGGCGATCACAGGCATCACAGACA CATCAACAGAGACAACATCC
Downstream 100 bases:
>100_bases TCCAGAGTTGTATGACAACTTTTGACGGGCCGGAAGCCCGTCAGAACGACCACCCACCCCTTCGGAGACCCCATGAAACT CAACAAACTCATCATCGGCA
Product: NAD-dependent epimerase/dehydratase
Products: UDPglucoseal [C]
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MNIVITGGAGFLGARLARELLKRGQLALAGATPKTIQTITLVDRAAPPADLAADRRIRQVVGDLNQLLEGDPAATPVVRA EDAIVFHLAAAVSGECEADFDLGMRSNLDATRALLQTCRALKTSPTVVFASSLAVFGNSPEHPLPAVIDDTTLPTPQNSY GIQKFIGEQLVADYARKGFIRGRNVRLMTVSVRPGRPNAAASSFLSGMIREPLAGVRVACPVPPETAVALSSPGRTIDGL IRAAQASDAEWGARTAINLPALKTTAGEMAAALERVAGKQVAALIDWTPDAAVAKIVTSWPAHINAVRARELGLLPDPDF ETIIRNYVLENPSVATLAERT
Sequences:
>Translated_341_residues MNIVITGGAGFLGARLARELLKRGQLALAGATPKTIQTITLVDRAAPPADLAADRRIRQVVGDLNQLLEGDPAATPVVRA EDAIVFHLAAAVSGECEADFDLGMRSNLDATRALLQTCRALKTSPTVVFASSLAVFGNSPEHPLPAVIDDTTLPTPQNSY GIQKFIGEQLVADYARKGFIRGRNVRLMTVSVRPGRPNAAASSFLSGMIREPLAGVRVACPVPPETAVALSSPGRTIDGL IRAAQASDAEWGARTAINLPALKTTAGEMAAALERVAGKQVAALIDWTPDAAVAKIVTSWPAHINAVRARELGLLPDPDF ETIIRNYVLENPSVATLAERT >Mature_341_residues MNIVITGGAGFLGARLARELLKRGQLALAGATPKTIQTITLVDRAAPPADLAADRRIRQVVGDLNQLLEGDPAATPVVRA EDAIVFHLAAAVSGECEADFDLGMRSNLDATRALLQTCRALKTSPTVVFASSLAVFGNSPEHPLPAVIDDTTLPTPQNSY GIQKFIGEQLVADYARKGFIRGRNVRLMTVSVRPGRPNAAASSFLSGMIREPLAGVRVACPVPPETAVALSSPGRTIDGL IRAAQASDAEWGARTAINLPALKTTAGEMAAALERVAGKQVAALIDWTPDAAVAKIVTSWPAHINAVRARELGLLPDPDF ETIIRNYVLENPSVATLAERT
Specific function: Galactose metabolism; third step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001509 - InterPro: IPR016040 [H]
Pfam domain/function: PF01370 Epimerase [H]
EC number: 5.1.3.2 [C]
Molecular weight: Translated: 35972; Mature: 35972
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIVITGGAGFLGARLARELLKRGQLALAGATPKTIQTITLVDRAAPPADLAADRRIRQV CEEEEECCCHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEHHCCCCCHHHHHHHHHHHH VGDLNQLLEGDPAATPVVRAEDAIVFHLAAAVSGECEADFDLGMRSNLDATRALLQTCRA HHHHHHHHCCCCCCCCEEECCCHHEEEEHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH LKTSPTVVFASSLAVFGNSPEHPLPAVIDDTTLPTPQNSYGIQKFIGEQLVADYARKGFI HCCCCCEEEECHHHHCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC RGRNVRLMTVSVRPGRPNAAASSFLSGMIREPLAGVRVACPVPPETAVALSSPGRTIDGL CCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEECCCCCHHHHH IRAAQASDAEWGARTAINLPALKTTAGEMAAALERVAGKQVAALIDWTPDAAVAKIVTSW HHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCHHEEEEEECCCCHHHHHHHHHC PAHINAVRARELGLLPDPDFETIIRNYVLENPSVATLAERT CHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHCCCC >Mature Secondary Structure MNIVITGGAGFLGARLARELLKRGQLALAGATPKTIQTITLVDRAAPPADLAADRRIRQV CEEEEECCCHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEEHHCCCCCHHHHHHHHHHHH VGDLNQLLEGDPAATPVVRAEDAIVFHLAAAVSGECEADFDLGMRSNLDATRALLQTCRA HHHHHHHHCCCCCCCCEEECCCHHEEEEHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHH LKTSPTVVFASSLAVFGNSPEHPLPAVIDDTTLPTPQNSYGIQKFIGEQLVADYARKGFI HCCCCCEEEECHHHHCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC RGRNVRLMTVSVRPGRPNAAASSFLSGMIREPLAGVRVACPVPPETAVALSSPGRTIDGL CCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEECCCCCHHHHH IRAAQASDAEWGARTAINLPALKTTAGEMAAALERVAGKQVAALIDWTPDAAVAKIVTSW HHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCHHEEEEEECCCCHHHHHHHHHC PAHINAVRARELGLLPDPDFETIIRNYVLENPSVATLAERT CHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NAD+ [C]
Metal ions: NA
Kcat value (1/min): 57600 [C]
Specific activity: 233.3
Km value (mM): 0.256 {UDPgalactose}} 0.225 {UDPgalactose}} 0.2 {UDPgalactose}} 0.18 {UDPgalactose}} 0.16 {UDPgalactose}} 0.14 {UDPgalactose}} 0.048 {UDPgalactose}} 0.026 {UDPgalactose}} [C]
Substrates: UDPglucose [C]
Specific reaction: UDPglucose <==> UDPglucoseal [C]
General reaction: Epimerization (specificity for carbon forming a hexosulose) [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]