| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is mhpC1 [H]
Identifier: 91787742
GI number: 91787742
Start: 1923517
End: 1924398
Strand: Direct
Name: mhpC1 [H]
Synonym: Bpro_1863
Alternate gene names: 91787742
Gene position: 1923517-1924398 (Clockwise)
Preceding gene: 91787741
Following gene: 91787753
Centisome position: 36.99
GC content: 65.42
Gene sequence:
>882_bases ATGACTCTTTCGGTACAGGTTCAAATCCAAGTCCCCCCTGAAGCACAAGCGCTTTTAGAAACAGCGGTCCGCAAGGAAAC GCCCTGCGGGGCGGGCAGCATGGTCTGGCATGTCTGGGGTGAGGCGGGTGGCAGCCGCGCGCTGGCGCCCGTGGTGCTTC TTCATGGCGGCAGCGGCAGCTGGACGCATTGGCTGCGCAACATTCTTCCCTTGGTCGAGTCGGGGCGCCGGGTCTATGTG CCGGACCTGCCCGGTTTTGGCGATTCAGCCGCACCGGCACAGGGGACGGACGCCGATGCCGTGCCCGGTCCGGTTGAGCA GGGGCTGAAGTTGCTGCTCGATGACGAGGCCTGTGATCTTGTGGGTTTTTCGTTTGGCGGCATGGTGGCCGGGTTTCTGG CGGCCCAGTTTCCGGCGCGGGCTGCCCGTGTAGTGCTGGTGGGCGCGCCCGGTTTGGGCATCGCACCCGAGAAGCCGATT CAGCTCAATTCGTGGCGGCACCTGACAGACCCAGCCCAGCGCGATGCCATTCACCGCGGCAACCTGGCGGCGCTGATGCT GTACCGCCCGGAGGCGATCACCGAGCTGGCGCTTCGCCTGCATGTGGCCAACGTGCTGCGCGACCGGATGAAAGGGCGCA GCCTGTCGCGTACCGACGTGCTGGCGCGTTCACTGGAGCAGGTGCGCTGCCCGGTGCATGCCATTTACGGCAGTGAAGAC GCCCTGTACCGGGGCAAGCTGGATGCGCTGGCGGCGGCTGTGCGGCAAGCCCGAAATTTCCGGACCCTGACGCTCATTGA TGCCGCCGGCCACTGGGTTCAGTTTGAACGGGCAGATGCCTTTAACCAGGCACTGCTGGCGGCACTCAGCGAGGCACCGT AA
Upstream 100 bases:
>100_bases ATTCTGAATCGCTACCGTCTCGGTCCCCCGGTCGTGATCGAAAGCTGAGGGGTCCTGTTTCGCGTCAACATCGAGGAGCG GGGCAAGGTATAAACGCTGA
Downstream 100 bases:
>100_bases GCGGTGGCGTGAGGCCGCGTCCGTGCGGGCTGCTTATTTCTCGATGGCCAGCAACTCAACTTCAAACGTCAGCGTGGCAT TGGGCGGCACCACACCGCCG
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: 2-hydroxy-6-ketonona-2,4-diene-1,9-dioic acid 5,6-hydrolase 1; 2-hydroxy-6-oxonona-2,4,7-triene-1,9-dioic acid 5,6-hydrolase 1; 2-hydroxy-6-oxonona-2,4-diene-1,9-dioic acid 5,6-hydrolase 1 [H]
Number of amino acids: Translated: 293; Mature: 292
Protein sequence:
>293_residues MTLSVQVQIQVPPEAQALLETAVRKETPCGAGSMVWHVWGEAGGSRALAPVVLLHGGSGSWTHWLRNILPLVESGRRVYV PDLPGFGDSAAPAQGTDADAVPGPVEQGLKLLLDDEACDLVGFSFGGMVAGFLAAQFPARAARVVLVGAPGLGIAPEKPI QLNSWRHLTDPAQRDAIHRGNLAALMLYRPEAITELALRLHVANVLRDRMKGRSLSRTDVLARSLEQVRCPVHAIYGSED ALYRGKLDALAAAVRQARNFRTLTLIDAAGHWVQFERADAFNQALLAALSEAP
Sequences:
>Translated_293_residues MTLSVQVQIQVPPEAQALLETAVRKETPCGAGSMVWHVWGEAGGSRALAPVVLLHGGSGSWTHWLRNILPLVESGRRVYV PDLPGFGDSAAPAQGTDADAVPGPVEQGLKLLLDDEACDLVGFSFGGMVAGFLAAQFPARAARVVLVGAPGLGIAPEKPI QLNSWRHLTDPAQRDAIHRGNLAALMLYRPEAITELALRLHVANVLRDRMKGRSLSRTDVLARSLEQVRCPVHAIYGSED ALYRGKLDALAAAVRQARNFRTLTLIDAAGHWVQFERADAFNQALLAALSEAP >Mature_292_residues TLSVQVQIQVPPEAQALLETAVRKETPCGAGSMVWHVWGEAGGSRALAPVVLLHGGSGSWTHWLRNILPLVESGRRVYVP DLPGFGDSAAPAQGTDADAVPGPVEQGLKLLLDDEACDLVGFSFGGMVAGFLAAQFPARAARVVLVGAPGLGIAPEKPIQ LNSWRHLTDPAQRDAIHRGNLAALMLYRPEAITELALRLHVANVLRDRMKGRSLSRTDVLARSLEQVRCPVHAIYGSEDA LYRGKLDALAAAVRQARNFRTLTLIDAAGHWVQFERADAFNQALLAALSEAP
Specific function: Catalyzes the cleavage of the C5-C6 bond of 2-hydroxy-6- oxononadienedioate and 2-hydroxy-6-oxononatrienedioate, a dienol ring fission product of the bacterial meta-cleavage pathway for degradation of phenylpropionic acid [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. MhpC family [H]
Homologues:
Organism=Escherichia coli, GI87081721, Length=257, Percent_Identity=27.2373540856031, Blast_Score=75, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: 3.7.1.-
Molecular weight: Translated: 31418; Mature: 31287
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLSVQVQIQVPPEAQALLETAVRKETPCGAGSMVWHVWGEAGGSRALAPVVLLHGGSGS CEEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCC WTHWLRNILPLVESGRRVYVPDLPGFGDSAAPAQGTDADAVPGPVEQGLKLLLDDEACDL HHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHEEECCCCHHE VGFSFGGMVAGFLAAQFPARAARVVLVGAPGLGIAPEKPIQLNSWRHLTDPAQRDAIHRG HHCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEECCCCCCCCCHHHHHHHCCC NLAALMLYRPEAITELALRLHVANVLRDRMKGRSLSRTDVLARSLEQVRCPVHAIYGSED CEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEECCCC ALYRGKLDALAAAVRQARNFRTLTLIDAAGHWVQFERADAFNQALLAALSEAP CHHHCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TLSVQVQIQVPPEAQALLETAVRKETPCGAGSMVWHVWGEAGGSRALAPVVLLHGGSGS EEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCC WTHWLRNILPLVESGRRVYVPDLPGFGDSAAPAQGTDADAVPGPVEQGLKLLLDDEACDL HHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHEEECCCCHHE VGFSFGGMVAGFLAAQFPARAARVVLVGAPGLGIAPEKPIQLNSWRHLTDPAQRDAIHRG HHCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEECCCCCCCCCHHHHHHHCCC NLAALMLYRPEAITELALRLHVANVLRDRMKGRSLSRTDVLARSLEQVRCPVHAIYGSED CEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEECCCC ALYRGKLDALAAAVRQARNFRTLTLIDAAGHWVQFERADAFNQALLAALSEAP CHHHCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA