Click here to switch to the map view.

The map label for this gene is rbn [C]

Identifier: 91787709

GI number: 91787709

Start: 1893062

End: 1894276

Strand: Direct

Name: rbn [C]

Synonym: Bpro_1830

Alternate gene names: 91787709

Gene position: 1893062-1894276 (Clockwise)

Preceding gene: 91787706

Following gene: 91787710

Centisome position: 36.4

GC content: 63.87

Gene sequence:

>1215_bases
ATGAAATTCCAGCAATCCCTGCAGGCGTTGTTGACCGACCTGTCCCGTTTTCCGTGGCGCCATACCGCGCTCACGCTGCG
CGACCGTTTTCGCGAAGACCACATGGGCCTGACGGCCAGCAGCCTGACCTTCACCACCTCGATCGCCCTGGTGCCCTTCT
TCACCGTGGCGCTGGCCATTTTTACGGCCTTCCCCATGTTTGCCAAACTGCAGGGCGCCCTGCAGGCCTGGCTGGTTCAG
AGCCTGATTCCCGACGACATCGCCCGGCAGGTGCTGGGTTATTTGACCCAGTTCAGCCGGCAAGCCAACAAGCTGGGCAT
TGCCGGACTGGCGGTGCTGCTGGTGACCGCGATTGCGCTGATTTTGACGATAGACCGCACGCTCAACGGGATCTGGCGTG
TCAGGAAGGCAAGGCCGCTGGCGCAGCGCGTGCTGATTTACTGGGCGGCCATTACCCTGGGGCCGCTGCTGCTGGCGGCC
AGCCTGGCGGGGACTTCCTATGTGCTGTCGGCCTCCCGGGGCCTGGTGGGCGTGATGCCCATCAGCCTGCGTTTCCTGCT
GGACGTGACCCAGTTTTTCCTGGTGGCCGGCGGCATGGCGGCGCTGTACCGCTACGTGCCCAATACCTATGTGAAATGGT
CCCATGCCTGGGTGGGCGGGCTGTTCGTGGCCGCTGGCCTGGAGCTGGGCAAGCGGATTGTCAGCCTCTACCTCAGTGCG
GTGCCGACCTACTCGCTGGTTTACGGCGCCTTCGCCACCTTGCCGATCCTGCTGGTGTGGATCTACTTCTCCTGGGTCAT
CGTGCTGATGGGCGCGGTCATTGCCGCCTACCTCCCCAGCCTGCTGGCCGGCGTGGCGCGCCGGGGCAGCGCGCACGGCT
GGTATTTCCAGTTGGCCATCGAGGTGCTGCAGCAGCTGAACCTTGCACGTATCACCGCGCGCAAGGGGGTGAGTGCATCC
CAACTGGCCGAACAGCTCGAGGTCGACGTACTGCAGCTCGAGCCTGTCCTGGAAACCCTGGTTGGGCTGGACTGGGTAGG
CCAGCTCAACGAGGCCGAGGGCGCTGCCGAGTCCCGCTACCTGCTGCTGGCCGACCCCGACACCACGCCCCTGGAGCCCC
TGATGCAGCTGCTGCTGCTGGACAAGGCGGATTCGGTCAAAAAATTATGGGAAAAAGCCCGTTGGCCAGCAATAAACCTG
CGTGATGCGCTGTAA

Upstream 100 bases:

>100_bases
TTGTTCATGGAGTGGAGTGTCATCAACCGGGTGGTTTCGCGTCATTGCTGAATCACCGATCTGTCGATTTTCTGATTTGC
CGTCAGGCATGATACCGGGG

Downstream 100 bases:

>100_bases
AAAGTAGCAAAAAAGTACCCTGACGACTCTTTGGGGTGCCAAGGCGCTGGTTAATCATCCGAAACCCTGATCTCGCGACG
CAGATTCCCTTGATTACTTT

Product: ribonuclease BN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MKFQQSLQALLTDLSRFPWRHTALTLRDRFREDHMGLTASSLTFTTSIALVPFFTVALAIFTAFPMFAKLQGALQAWLVQ
SLIPDDIARQVLGYLTQFSRQANKLGIAGLAVLLVTAIALILTIDRTLNGIWRVRKARPLAQRVLIYWAAITLGPLLLAA
SLAGTSYVLSASRGLVGVMPISLRFLLDVTQFFLVAGGMAALYRYVPNTYVKWSHAWVGGLFVAAGLELGKRIVSLYLSA
VPTYSLVYGAFATLPILLVWIYFSWVIVLMGAVIAAYLPSLLAGVARRGSAHGWYFQLAIEVLQQLNLARITARKGVSAS
QLAEQLEVDVLQLEPVLETLVGLDWVGQLNEAEGAAESRYLLLADPDTTPLEPLMQLLLLDKADSVKKLWEKARWPAINL
RDAL

Sequences:

>Translated_404_residues
MKFQQSLQALLTDLSRFPWRHTALTLRDRFREDHMGLTASSLTFTTSIALVPFFTVALAIFTAFPMFAKLQGALQAWLVQ
SLIPDDIARQVLGYLTQFSRQANKLGIAGLAVLLVTAIALILTIDRTLNGIWRVRKARPLAQRVLIYWAAITLGPLLLAA
SLAGTSYVLSASRGLVGVMPISLRFLLDVTQFFLVAGGMAALYRYVPNTYVKWSHAWVGGLFVAAGLELGKRIVSLYLSA
VPTYSLVYGAFATLPILLVWIYFSWVIVLMGAVIAAYLPSLLAGVARRGSAHGWYFQLAIEVLQQLNLARITARKGVSAS
QLAEQLEVDVLQLEPVLETLVGLDWVGQLNEAEGAAESRYLLLADPDTTPLEPLMQLLLLDKADSVKKLWEKARWPAINL
RDAL
>Mature_404_residues
MKFQQSLQALLTDLSRFPWRHTALTLRDRFREDHMGLTASSLTFTTSIALVPFFTVALAIFTAFPMFAKLQGALQAWLVQ
SLIPDDIARQVLGYLTQFSRQANKLGIAGLAVLLVTAIALILTIDRTLNGIWRVRKARPLAQRVLIYWAAITLGPLLLAA
SLAGTSYVLSASRGLVGVMPISLRFLLDVTQFFLVAGGMAALYRYVPNTYVKWSHAWVGGLFVAAGLELGKRIVSLYLSA
VPTYSLVYGAFATLPILLVWIYFSWVIVLMGAVIAAYLPSLLAGVARRGSAHGWYFQLAIEVLQQLNLARITARKGVSAS
QLAEQLEVDVLQLEPVLETLVGLDWVGQLNEAEGAAESRYLLLADPDTTPLEPLMQLLLLDKADSVKKLWEKARWPAINL
RDAL

Specific function: 3' To 5' Exoribonuclease Necessary For 3'Maturation Of tRNA Molecules. [C]

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0761 family [H]

Homologues:

Organism=Escherichia coli, GI1790319, Length=261, Percent_Identity=39.0804597701149, Blast_Score=156, Evalue=2e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 44538; Mature: 44538

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFQQSLQALLTDLSRFPWRHTALTLRDRFREDHMGLTASSLTFTTSIALVPFFTVALAI
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
FTAFPMFAKLQGALQAWLVQSLIPDDIARQVLGYLTQFSRQANKLGIAGLAVLLVTAIAL
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILTIDRTLNGIWRVRKARPLAQRVLIYWAAITLGPLLLAASLAGTSYVLSASRGLVGVMP
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEHHH
ISLRFLLDVTQFFLVAGGMAALYRYVPNTYVKWSHAWVGGLFVAAGLELGKRIVSLYLSA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
VPTYSLVYGAFATLPILLVWIYFSWVIVLMGAVIAAYLPSLLAGVARRGSAHGWYFQLAI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
EVLQQLNLARITARKGVSASQLAEQLEVDVLQLEPVLETLVGLDWVGQLNEAEGAAESRY
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCE
LLLADPDTTPLEPLMQLLLLDKADSVKKLWEKARWPAINLRDAL
EEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure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EEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA