| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787706
Identifier: 91787706
GI number: 91787706
Start: 1890633
End: 1891070
Strand: Direct
Name: 91787706
Synonym: Bpro_1827
Alternate gene names: NA
Gene position: 1890633-1891070 (Clockwise)
Preceding gene: 91787705
Following gene: 91787709
Centisome position: 36.36
GC content: 54.79
Gene sequence:
>438_bases GTGGTCGCCATCAAATACGCCGATTTGCTTGATGCCTTTGAATTCGTCAGCTTCGGTGCCCCGTTCGACAGCAGTGCCTT CATCTGCGTGGATACGGGCGTGATTTACTGCACATCGGACACCCTTGAACTCGACGAGGAAGTCCCGGAGGACCTCGAAA CATCTGATCAGTACATCGCCATTCCGCACAAGAACGAGTTGAGCCTCGGTCGGGACCTGGTTTTGTCCTTTGTTGATCAA GCGCTGCCGAATGACTACAACACCGTGGCAGGCTTTTTCCGACGCAAAGGTGCCTACAGCCGCTTCAAACAATTACTGGA GTCCCGAGGTGTCCTCAACGCCTGGTACCTGTTTGAAACCCATGCTGTCGAAGTCGCATTGCGCCAATGGTGTGACGAGA ATAACGTCCAGCTCAGCCCGGCTCAACCGGAGGCCTGA
Upstream 100 bases:
>100_bases AGGCGCTGGGGCGCTTCCTGGCACAGCACCTTCCGGCGGAAGCCATGGACCCTGTTCCACGGTAAAAAGTTCGGCAACAA TATTTTTATTCGAGGTTACC
Downstream 100 bases:
>100_bases ACGTGGGAGGGCGCATGGCGAGCCATCCTGCCTGTGCTGAATTCTGGCCAGATGAGTGGCTTCATCAGTCGCTCGAAGGT GTTCGTTCAAGCTATATCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MVAIKYADLLDAFEFVSFGAPFDSSAFICVDTGVIYCTSDTLELDEEVPEDLETSDQYIAIPHKNELSLGRDLVLSFVDQ ALPNDYNTVAGFFRRKGAYSRFKQLLESRGVLNAWYLFETHAVEVALRQWCDENNVQLSPAQPEA
Sequences:
>Translated_145_residues MVAIKYADLLDAFEFVSFGAPFDSSAFICVDTGVIYCTSDTLELDEEVPEDLETSDQYIAIPHKNELSLGRDLVLSFVDQ ALPNDYNTVAGFFRRKGAYSRFKQLLESRGVLNAWYLFETHAVEVALRQWCDENNVQLSPAQPEA >Mature_145_residues MVAIKYADLLDAFEFVSFGAPFDSSAFICVDTGVIYCTSDTLELDEEVPEDLETSDQYIAIPHKNELSLGRDLVLSFVDQ ALPNDYNTVAGFFRRKGAYSRFKQLLESRGVLNAWYLFETHAVEVALRQWCDENNVQLSPAQPEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16353; Mature: 16353
Theoretical pI: Translated: 4.02; Mature: 4.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAIKYADLLDAFEFVSFGAPFDSSAFICVDTGVIYCTSDTLELDEEVPEDLETSDQYIA CEEEHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEEECCCCCCCCCCCCCCCCCCCEEE IPHKNELSLGRDLVLSFVDQALPNDYNTVAGFFRRKGAYSRFKQLLESRGVLNAWYLFET CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCEEEHHHHHH HAVEVALRQWCDENNVQLSPAQPEA HHHHHHHHHHCCCCCEEECCCCCCC >Mature Secondary Structure MVAIKYADLLDAFEFVSFGAPFDSSAFICVDTGVIYCTSDTLELDEEVPEDLETSDQYIA CEEEHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEEECCCCCCCCCCCCCCCCCCCEEE IPHKNELSLGRDLVLSFVDQALPNDYNTVAGFFRRKGAYSRFKQLLESRGVLNAWYLFET CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCEEEHHHHHH HAVEVALRQWCDENNVQLSPAQPEA HHHHHHHHHHCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA