Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is 91787706

Identifier: 91787706

GI number: 91787706

Start: 1890633

End: 1891070

Strand: Direct

Name: 91787706

Synonym: Bpro_1827

Alternate gene names: NA

Gene position: 1890633-1891070 (Clockwise)

Preceding gene: 91787705

Following gene: 91787709

Centisome position: 36.36

GC content: 54.79

Gene sequence:

>438_bases
GTGGTCGCCATCAAATACGCCGATTTGCTTGATGCCTTTGAATTCGTCAGCTTCGGTGCCCCGTTCGACAGCAGTGCCTT
CATCTGCGTGGATACGGGCGTGATTTACTGCACATCGGACACCCTTGAACTCGACGAGGAAGTCCCGGAGGACCTCGAAA
CATCTGATCAGTACATCGCCATTCCGCACAAGAACGAGTTGAGCCTCGGTCGGGACCTGGTTTTGTCCTTTGTTGATCAA
GCGCTGCCGAATGACTACAACACCGTGGCAGGCTTTTTCCGACGCAAAGGTGCCTACAGCCGCTTCAAACAATTACTGGA
GTCCCGAGGTGTCCTCAACGCCTGGTACCTGTTTGAAACCCATGCTGTCGAAGTCGCATTGCGCCAATGGTGTGACGAGA
ATAACGTCCAGCTCAGCCCGGCTCAACCGGAGGCCTGA

Upstream 100 bases:

>100_bases
AGGCGCTGGGGCGCTTCCTGGCACAGCACCTTCCGGCGGAAGCCATGGACCCTGTTCCACGGTAAAAAGTTCGGCAACAA
TATTTTTATTCGAGGTTACC

Downstream 100 bases:

>100_bases
ACGTGGGAGGGCGCATGGCGAGCCATCCTGCCTGTGCTGAATTCTGGCCAGATGAGTGGCTTCATCAGTCGCTCGAAGGT
GTTCGTTCAAGCTATATCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MVAIKYADLLDAFEFVSFGAPFDSSAFICVDTGVIYCTSDTLELDEEVPEDLETSDQYIAIPHKNELSLGRDLVLSFVDQ
ALPNDYNTVAGFFRRKGAYSRFKQLLESRGVLNAWYLFETHAVEVALRQWCDENNVQLSPAQPEA

Sequences:

>Translated_145_residues
MVAIKYADLLDAFEFVSFGAPFDSSAFICVDTGVIYCTSDTLELDEEVPEDLETSDQYIAIPHKNELSLGRDLVLSFVDQ
ALPNDYNTVAGFFRRKGAYSRFKQLLESRGVLNAWYLFETHAVEVALRQWCDENNVQLSPAQPEA
>Mature_145_residues
MVAIKYADLLDAFEFVSFGAPFDSSAFICVDTGVIYCTSDTLELDEEVPEDLETSDQYIAIPHKNELSLGRDLVLSFVDQ
ALPNDYNTVAGFFRRKGAYSRFKQLLESRGVLNAWYLFETHAVEVALRQWCDENNVQLSPAQPEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16353; Mature: 16353

Theoretical pI: Translated: 4.02; Mature: 4.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAIKYADLLDAFEFVSFGAPFDSSAFICVDTGVIYCTSDTLELDEEVPEDLETSDQYIA
CEEEHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEEECCCCCCCCCCCCCCCCCCCEEE
IPHKNELSLGRDLVLSFVDQALPNDYNTVAGFFRRKGAYSRFKQLLESRGVLNAWYLFET
CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCEEEHHHHHH
HAVEVALRQWCDENNVQLSPAQPEA
HHHHHHHHHHCCCCCEEECCCCCCC
>Mature Secondary Structure
MVAIKYADLLDAFEFVSFGAPFDSSAFICVDTGVIYCTSDTLELDEEVPEDLETSDQYIA
CEEEHHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEEECCCCCCCCCCCCCCCCCCCEEE
IPHKNELSLGRDLVLSFVDQALPNDYNTVAGFFRRKGAYSRFKQLLESRGVLNAWYLFET
CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCEEEHHHHHH
HAVEVALRQWCDENNVQLSPAQPEA
HHHHHHHHHHCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA