| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787689
Identifier: 91787689
GI number: 91787689
Start: 1871889
End: 1872401
Strand: Direct
Name: 91787689
Synonym: Bpro_1808
Alternate gene names: NA
Gene position: 1871889-1872401 (Clockwise)
Preceding gene: 91787688
Following gene: 91787690
Centisome position: 36.0
GC content: 60.04
Gene sequence:
>513_bases ATGAAAAACACTTTATCGCTGTCCCTTTTATCCTTGCTGTTGGCCGGTGCGGGGAATTCCGCATGGGCCCAGCAGGTTTA CCGTTGTGTTGCCGCCAACGGCGGCGTGCCAGAGTACATCAACAACGCCAAGGATGCCCAGAACCGGAATTGCAAGCTGC TGTCGGGTGGCAATGTCACCGTGGTCCAGGGCAACCCCGTGGCCAAGGCGCCTGTGCGTGTCGCTGCGGCGGCGGCTTCT GGCGGTCCGCGAACCGATGGCAGCCCGGAGCAGCGTGCACGTGACAGCGACTCGCGCGCCATTCTGGAGTCCGAGCTGAA AAAGGCCGAGGCCCGATTGGCCGAGCAGCAAAAAGAGTACAACAACGGCGAGCCTGAAAAGCAGGGTATTGAAGGACGCA ACTACCAACGCTACCTAGACCGCGTGGCTGAACTCAAGGAAAGCATCGCCCGCAACCAGAGCGATATTGCCGGCATCAAG CGCGAGATTTCGCGTCTCCCGGCCGCAAATTAA
Upstream 100 bases:
>100_bases TTATGGCTGGTGGGTAATAAGGATGCTGACTTTGTGTTTTTGCAGCTTTGCCGCATACTGATAGACCGTCCTTTGCCTAT ACGGGCATCTGGAGTTCCGA
Downstream 100 bases:
>100_bases GCGTTTACCTCCACCGCTTATGGGCCAAAATGGACGGCTTGAACAAGCCACATTTACCCCCCGTTTTATCCGCCACCCCG GCGCCCCCGCGCTTTCAATC
Product: putative signal peptide protein
Products: NA
Alternate protein names: Signal Peptide
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MKNTLSLSLLSLLLAGAGNSAWAQQVYRCVAANGGVPEYINNAKDAQNRNCKLLSGGNVTVVQGNPVAKAPVRVAAAAAS GGPRTDGSPEQRARDSDSRAILESELKKAEARLAEQQKEYNNGEPEKQGIEGRNYQRYLDRVAELKESIARNQSDIAGIK REISRLPAAN
Sequences:
>Translated_170_residues MKNTLSLSLLSLLLAGAGNSAWAQQVYRCVAANGGVPEYINNAKDAQNRNCKLLSGGNVTVVQGNPVAKAPVRVAAAAAS GGPRTDGSPEQRARDSDSRAILESELKKAEARLAEQQKEYNNGEPEKQGIEGRNYQRYLDRVAELKESIARNQSDIAGIK REISRLPAAN >Mature_170_residues MKNTLSLSLLSLLLAGAGNSAWAQQVYRCVAANGGVPEYINNAKDAQNRNCKLLSGGNVTVVQGNPVAKAPVRVAAAAAS GGPRTDGSPEQRARDSDSRAILESELKKAEARLAEQQKEYNNGEPEKQGIEGRNYQRYLDRVAELKESIARNQSDIAGIK REISRLPAAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18246; Mature: 18246
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNTLSLSLLSLLLAGAGNSAWAQQVYRCVAANGGVPEYINNAKDAQNRNCKLLSGGNVT CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHCCCHHCCCCCEEEEECCCEE VVQGNPVAKAPVRVAAAAASGGPRTDGSPEQRARDSDSRAILESELKKAEARLAEQQKEY EEECCCCCCCHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH NNGEPEKQGIEGRNYQRYLDRVAELKESIARNQSDIAGIKREISRLPAAN CCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKNTLSLSLLSLLLAGAGNSAWAQQVYRCVAANGGVPEYINNAKDAQNRNCKLLSGGNVT CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHCCCHHCCCCCEEEEECCCEE VVQGNPVAKAPVRVAAAAASGGPRTDGSPEQRARDSDSRAILESELKKAEARLAEQQKEY EEECCCCCCCHHHHHHHHCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH NNGEPEKQGIEGRNYQRYLDRVAELKESIARNQSDIAGIKREISRLPAAN CCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA