| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787665
Identifier: 91787665
GI number: 91787665
Start: 1844117
End: 1844662
Strand: Reverse
Name: 91787665
Synonym: Bpro_1783
Alternate gene names: NA
Gene position: 1844662-1844117 (Counterclockwise)
Preceding gene: 91787666
Following gene: 91787656
Centisome position: 35.47
GC content: 57.14
Gene sequence:
>546_bases ATGTTCAAGAAATTGCTGGCTTTTCTTGCCGCCATGTCCCTCGTCGCAGCGTTTGCGGCGGTTGATGTCAACAAAGCCAC TGAAGCCGAACTCGACGGCATCAAGGGCATCGGTCCTGTCACCACCAAGCTGATTATTTCCGAGCGTAAAAAAGGCGAGT TCAAAAATTGGGACGACTTCATCGCACGCGTCAAAGGCGTAGGCGACAAAAGCGCCGCCAAGTTTTCCGCTGAAGGCCTG ACAGTCGGTGGCGCAGCTTACAAGGGTGCCGGCGCCGCAGAAGCCAAGGCTGACGCCAAAGCCAAAGCCGGTGCCAAGAA AACTGACAAGCCCATGACCGAAAAAGCCAAGGACGCTGCAGTGGCCACTAAGGAAGCCGTCAAGGACGCCGCTGTCGCCA CCAAGGAAGCTGTGAAAGAAACCGCCAAAGACGCCAAGGCCGCCGTGACACCCAAAGCCGACGCAAAAGTCGAAGCCAAG GCCGAAACCAAAGCAGCAGCCAAGGCTGAGCCAGCCAAGCCTGCTGCCAGCGCTGCCAAGAAGTAA
Upstream 100 bases:
>100_bases GGTCAACCCAGCCTGAAACCGTACGTTATTGAAAAGGACATCCTTATTCACAAGGATGGATCATGCGTCTGGTTCAATTC AATCTTTGAGGAGTTTTCTC
Downstream 100 bases:
>100_bases CCTTCAAAGTCCACCGACCCAAAAAACCCGCCCCCTGGCGGGTTTTTTAATGCCTTTTTACTCTCTCCGCCCCTTGTCAG TGTTTGGCGACAATGATGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MFKKLLAFLAAMSLVAAFAAVDVNKATEAELDGIKGIGPVTTKLIISERKKGEFKNWDDFIARVKGVGDKSAAKFSAEGL TVGGAAYKGAGAAEAKADAKAKAGAKKTDKPMTEKAKDAAVATKEAVKDAAVATKEAVKETAKDAKAAVTPKADAKVEAK AETKAAAKAEPAKPAASAAKK
Sequences:
>Translated_181_residues MFKKLLAFLAAMSLVAAFAAVDVNKATEAELDGIKGIGPVTTKLIISERKKGEFKNWDDFIARVKGVGDKSAAKFSAEGL TVGGAAYKGAGAAEAKADAKAKAGAKKTDKPMTEKAKDAAVATKEAVKDAAVATKEAVKETAKDAKAAVTPKADAKVEAK AETKAAAKAEPAKPAASAAKK >Mature_181_residues MFKKLLAFLAAMSLVAAFAAVDVNKATEAELDGIKGIGPVTTKLIISERKKGEFKNWDDFIARVKGVGDKSAAKFSAEGL TVGGAAYKGAGAAEAKADAKAKAGAKKTDKPMTEKAKDAAVATKEAVKDAAVATKEAVKETAKDAKAAVTPKADAKVEAK AETKAAAKAEPAKPAASAAKK
Specific function: Unknown
COG id: COG1555
COG function: function code L; DNA uptake protein and related DNA-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18405; Mature: 18405
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKKLLAFLAAMSLVAAFAAVDVNKATEAELDGIKGIGPVTTKLIISERKKGEFKNWDDF CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHH IARVKGVGDKSAAKFSAEGLTVGGAAYKGAGAAEAKADAKAKAGAKKTDKPMTEKAKDAA HHHHHCCCCHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHH VATKEAVKDAAVATKEAVKETAKDAKAAVTPKADAKVEAKAETKAAAKAEPAKPAASAAK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHCC K C >Mature Secondary Structure MFKKLLAFLAAMSLVAAFAAVDVNKATEAELDGIKGIGPVTTKLIISERKKGEFKNWDDF CHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHH IARVKGVGDKSAAKFSAEGLTVGGAAYKGAGAAEAKADAKAKAGAKKTDKPMTEKAKDAA HHHHHCCCCHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHH VATKEAVKDAAVATKEAVKETAKDAKAAVTPKADAKVEAKAETKAAAKAEPAKPAASAAK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHCC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA