| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yvgK [H]
Identifier: 91787639
GI number: 91787639
Start: 1818792
End: 1819907
Strand: Reverse
Name: yvgK [H]
Synonym: Bpro_1757
Alternate gene names: 91787639
Gene position: 1819907-1818792 (Counterclockwise)
Preceding gene: 91787647
Following gene: 91787637
Centisome position: 35.0
GC content: 64.78
Gene sequence:
>1116_bases ATGCACAAAGTCGAACTCTCCTACCTGCTGTCCACCGAGCGGAGCAAAAATGCCCTGATCCGCAACCCGCTGATGGACAT GCTCCATGCGGTGCAGGAAGAAGGTTCCATTTCCGGCGCCTCCAGGGCGCTGGACCTGTCTTACCGCCATGTCTGGGGCG CGCTGAAGAACTGGGAGCAGAAGCTGGGCCGCACGCTCATCGTCTGGGACAAAGGCCAGCATGCAAGGCTGACGGAGTTT GGCGAAAAACTGCTGTGGGCTGAGCGCCAGGCCCAGGCCCGTCTCGCACCGCAGATTGAAGCCCTGCGGGGCGACATTGA ACGCGCCTTCTCAACTGCCTTTGACGACAATGCCCACGTGCTGACGCTCTATGCCAGCCACGACGCGGCGCTGTCGGCCC TGCGCGAGCAGGCGGCTCCCCGCGGCCTGCACCTGGACATCCGCTTCATGGGCAGTGTGGATGCGATTGCCGCACTGAAC GCCGGGCGCTGCATGATGGCCGGCTTTCACGCCCTGGACCAACCTGGCAGCAAGTCCGTGGCGGCGCACGCCTATCGCGG CCTGCTCAAGCCCGGCCTGCACAAACTGATCGGCTTTGCCCACCGCACACAAGGCCTGATCGTGGCCAGAAACAACCCTA TGGGCATCACGGGCCTGGCGGATTTGAAACGGGCTGGCCTGCGCTATGTCAACCGCGCCGAGGGCACCGGCACGCGGGTG CTGCTGGACGAATTGCTGGCGCAGGCCGGCATGGGTCCGACGGATATCCACGGCTACCCGAGCCAGGAACCCTCGCATGC GGCCGTGGCACAGGCGGTGGCCAGCGGTGCCGCAGATGCGGGGCTGGGCATTGAAGCGGCGGCACGCGAGCAGGGGCTGG GCTTTGTACCCCTGACCCAGGAGCGCTACCACCTGGTGTGCCTGAAGTCGGCGCTGCCCGAGCCGCAGGTGCAGGCCTTG CTGAAGGAGCTGCAAAGCCCCGAGTGGCAGACTAGCCTGGAAAAGCTGCCAGGCTACAGCGGCAAGGACGCCCAGAGCGG CAAGGTGCTGTCCCTGCGCGCCACCTTGCCGTGGTGGAACTACCGCAAGGAAAAAAACAATAAAAAAGAGCCCTGA
Upstream 100 bases:
>100_bases TTGCATAGGACGCCATGCGCATGCACCACTGAAGGCGTGGCCCGGCCCGCCGATTTCTTCGGGACCTTGCCCGCATAATC AGCACAGCAAACCGCCCGCC
Downstream 100 bases:
>100_bases CCCAATCAATTATTGGGCAAGGGCTATTGTTTTTATAGCGAGCAGGATCGGAATCCACAAAAGATGTCATCGCGCTCGGG CGGGTAGAAGTTCCGGTATT
Product: molybdate metabolism transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MHKVELSYLLSTERSKNALIRNPLMDMLHAVQEEGSISGASRALDLSYRHVWGALKNWEQKLGRTLIVWDKGQHARLTEF GEKLLWAERQAQARLAPQIEALRGDIERAFSTAFDDNAHVLTLYASHDAALSALREQAAPRGLHLDIRFMGSVDAIAALN AGRCMMAGFHALDQPGSKSVAAHAYRGLLKPGLHKLIGFAHRTQGLIVARNNPMGITGLADLKRAGLRYVNRAEGTGTRV LLDELLAQAGMGPTDIHGYPSQEPSHAAVAQAVASGAADAGLGIEAAAREQGLGFVPLTQERYHLVCLKSALPEPQVQAL LKELQSPEWQTSLEKLPGYSGKDAQSGKVLSLRATLPWWNYRKEKNNKKEP
Sequences:
>Translated_371_residues MHKVELSYLLSTERSKNALIRNPLMDMLHAVQEEGSISGASRALDLSYRHVWGALKNWEQKLGRTLIVWDKGQHARLTEF GEKLLWAERQAQARLAPQIEALRGDIERAFSTAFDDNAHVLTLYASHDAALSALREQAAPRGLHLDIRFMGSVDAIAALN AGRCMMAGFHALDQPGSKSVAAHAYRGLLKPGLHKLIGFAHRTQGLIVARNNPMGITGLADLKRAGLRYVNRAEGTGTRV LLDELLAQAGMGPTDIHGYPSQEPSHAAVAQAVASGAADAGLGIEAAAREQGLGFVPLTQERYHLVCLKSALPEPQVQAL LKELQSPEWQTSLEKLPGYSGKDAQSGKVLSLRATLPWWNYRKEKNNKKEP >Mature_371_residues MHKVELSYLLSTERSKNALIRNPLMDMLHAVQEEGSISGASRALDLSYRHVWGALKNWEQKLGRTLIVWDKGQHARLTEF GEKLLWAERQAQARLAPQIEALRGDIERAFSTAFDDNAHVLTLYASHDAALSALREQAAPRGLHLDIRFMGSVDAIAALN AGRCMMAGFHALDQPGSKSVAAHAYRGLLKPGLHKLIGFAHRTQGLIVARNNPMGITGLADLKRAGLRYVNRAEGTGTRV LLDELLAQAGMGPTDIHGYPSQEPSHAAVAQAVASGAADAGLGIEAAAREQGLGFVPLTQERYHLVCLKSALPEPQVQAL LKELQSPEWQTSLEKLPGYSGKDAQSGKVLSLRATLPWWNYRKEKNNKKEP
Specific function: Unknown
COG id: COG1910
COG function: function code P; Periplasmic molybdate-binding protein/domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009061 - InterPro: IPR010093 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40559; Mature: 40559
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKVELSYLLSTERSKNALIRNPLMDMLHAVQEEGSISGASRALDLSYRHVWGALKNWEQ CCCEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH KLGRTLIVWDKGQHARLTEFGEKLLWAERQAQARLAPQIEALRGDIERAFSTAFDDNAHV HHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE LTLYASHDAALSALREQAAPRGLHLDIRFMGSVDAIAALNAGRCMMAGFHALDQPGSKSV EEEEECCHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHCCCCHHHHHHHHHHCCCCCCHH AAHAYRGLLKPGLHKLIGFAHRTQGLIVARNNPMGITGLADLKRAGLRYVNRAEGTGTRV HHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHH LLDELLAQAGMGPTDIHGYPSQEPSHAAVAQAVASGAADAGLGIEAAAREQGLGFVPLTQ HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEECCC ERYHLVCLKSALPEPQVQALLKELQSPEWQTSLEKLPGYSGKDAQSGKVLSLRATLPWWN CCEEEEEEHHHCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHH YRKEKNNKKEP CHHHCCCCCCC >Mature Secondary Structure MHKVELSYLLSTERSKNALIRNPLMDMLHAVQEEGSISGASRALDLSYRHVWGALKNWEQ CCCEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH KLGRTLIVWDKGQHARLTEFGEKLLWAERQAQARLAPQIEALRGDIERAFSTAFDDNAHV HHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE LTLYASHDAALSALREQAAPRGLHLDIRFMGSVDAIAALNAGRCMMAGFHALDQPGSKSV EEEEECCHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHCCCCHHHHHHHHHHCCCCCCHH AAHAYRGLLKPGLHKLIGFAHRTQGLIVARNNPMGITGLADLKRAGLRYVNRAEGTGTRV HHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHH LLDELLAQAGMGPTDIHGYPSQEPSHAAVAQAVASGAADAGLGIEAAAREQGLGFVPLTQ HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEECCC ERYHLVCLKSALPEPQVQALLKELQSPEWQTSLEKLPGYSGKDAQSGKVLSLRATLPWWN CCEEEEEEHHHCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHH YRKEKNNKKEP CHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9639930; 9384377 [H]