Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yvgK [H]

Identifier: 91787639

GI number: 91787639

Start: 1818792

End: 1819907

Strand: Reverse

Name: yvgK [H]

Synonym: Bpro_1757

Alternate gene names: 91787639

Gene position: 1819907-1818792 (Counterclockwise)

Preceding gene: 91787647

Following gene: 91787637

Centisome position: 35.0

GC content: 64.78

Gene sequence:

>1116_bases
ATGCACAAAGTCGAACTCTCCTACCTGCTGTCCACCGAGCGGAGCAAAAATGCCCTGATCCGCAACCCGCTGATGGACAT
GCTCCATGCGGTGCAGGAAGAAGGTTCCATTTCCGGCGCCTCCAGGGCGCTGGACCTGTCTTACCGCCATGTCTGGGGCG
CGCTGAAGAACTGGGAGCAGAAGCTGGGCCGCACGCTCATCGTCTGGGACAAAGGCCAGCATGCAAGGCTGACGGAGTTT
GGCGAAAAACTGCTGTGGGCTGAGCGCCAGGCCCAGGCCCGTCTCGCACCGCAGATTGAAGCCCTGCGGGGCGACATTGA
ACGCGCCTTCTCAACTGCCTTTGACGACAATGCCCACGTGCTGACGCTCTATGCCAGCCACGACGCGGCGCTGTCGGCCC
TGCGCGAGCAGGCGGCTCCCCGCGGCCTGCACCTGGACATCCGCTTCATGGGCAGTGTGGATGCGATTGCCGCACTGAAC
GCCGGGCGCTGCATGATGGCCGGCTTTCACGCCCTGGACCAACCTGGCAGCAAGTCCGTGGCGGCGCACGCCTATCGCGG
CCTGCTCAAGCCCGGCCTGCACAAACTGATCGGCTTTGCCCACCGCACACAAGGCCTGATCGTGGCCAGAAACAACCCTA
TGGGCATCACGGGCCTGGCGGATTTGAAACGGGCTGGCCTGCGCTATGTCAACCGCGCCGAGGGCACCGGCACGCGGGTG
CTGCTGGACGAATTGCTGGCGCAGGCCGGCATGGGTCCGACGGATATCCACGGCTACCCGAGCCAGGAACCCTCGCATGC
GGCCGTGGCACAGGCGGTGGCCAGCGGTGCCGCAGATGCGGGGCTGGGCATTGAAGCGGCGGCACGCGAGCAGGGGCTGG
GCTTTGTACCCCTGACCCAGGAGCGCTACCACCTGGTGTGCCTGAAGTCGGCGCTGCCCGAGCCGCAGGTGCAGGCCTTG
CTGAAGGAGCTGCAAAGCCCCGAGTGGCAGACTAGCCTGGAAAAGCTGCCAGGCTACAGCGGCAAGGACGCCCAGAGCGG
CAAGGTGCTGTCCCTGCGCGCCACCTTGCCGTGGTGGAACTACCGCAAGGAAAAAAACAATAAAAAAGAGCCCTGA

Upstream 100 bases:

>100_bases
TTGCATAGGACGCCATGCGCATGCACCACTGAAGGCGTGGCCCGGCCCGCCGATTTCTTCGGGACCTTGCCCGCATAATC
AGCACAGCAAACCGCCCGCC

Downstream 100 bases:

>100_bases
CCCAATCAATTATTGGGCAAGGGCTATTGTTTTTATAGCGAGCAGGATCGGAATCCACAAAAGATGTCATCGCGCTCGGG
CGGGTAGAAGTTCCGGTATT

Product: molybdate metabolism transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MHKVELSYLLSTERSKNALIRNPLMDMLHAVQEEGSISGASRALDLSYRHVWGALKNWEQKLGRTLIVWDKGQHARLTEF
GEKLLWAERQAQARLAPQIEALRGDIERAFSTAFDDNAHVLTLYASHDAALSALREQAAPRGLHLDIRFMGSVDAIAALN
AGRCMMAGFHALDQPGSKSVAAHAYRGLLKPGLHKLIGFAHRTQGLIVARNNPMGITGLADLKRAGLRYVNRAEGTGTRV
LLDELLAQAGMGPTDIHGYPSQEPSHAAVAQAVASGAADAGLGIEAAAREQGLGFVPLTQERYHLVCLKSALPEPQVQAL
LKELQSPEWQTSLEKLPGYSGKDAQSGKVLSLRATLPWWNYRKEKNNKKEP

Sequences:

>Translated_371_residues
MHKVELSYLLSTERSKNALIRNPLMDMLHAVQEEGSISGASRALDLSYRHVWGALKNWEQKLGRTLIVWDKGQHARLTEF
GEKLLWAERQAQARLAPQIEALRGDIERAFSTAFDDNAHVLTLYASHDAALSALREQAAPRGLHLDIRFMGSVDAIAALN
AGRCMMAGFHALDQPGSKSVAAHAYRGLLKPGLHKLIGFAHRTQGLIVARNNPMGITGLADLKRAGLRYVNRAEGTGTRV
LLDELLAQAGMGPTDIHGYPSQEPSHAAVAQAVASGAADAGLGIEAAAREQGLGFVPLTQERYHLVCLKSALPEPQVQAL
LKELQSPEWQTSLEKLPGYSGKDAQSGKVLSLRATLPWWNYRKEKNNKKEP
>Mature_371_residues
MHKVELSYLLSTERSKNALIRNPLMDMLHAVQEEGSISGASRALDLSYRHVWGALKNWEQKLGRTLIVWDKGQHARLTEF
GEKLLWAERQAQARLAPQIEALRGDIERAFSTAFDDNAHVLTLYASHDAALSALREQAAPRGLHLDIRFMGSVDAIAALN
AGRCMMAGFHALDQPGSKSVAAHAYRGLLKPGLHKLIGFAHRTQGLIVARNNPMGITGLADLKRAGLRYVNRAEGTGTRV
LLDELLAQAGMGPTDIHGYPSQEPSHAAVAQAVASGAADAGLGIEAAAREQGLGFVPLTQERYHLVCLKSALPEPQVQAL
LKELQSPEWQTSLEKLPGYSGKDAQSGKVLSLRATLPWWNYRKEKNNKKEP

Specific function: Unknown

COG id: COG1910

COG function: function code P; Periplasmic molybdate-binding protein/domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR010093 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40559; Mature: 40559

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHKVELSYLLSTERSKNALIRNPLMDMLHAVQEEGSISGASRALDLSYRHVWGALKNWEQ
CCCEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
KLGRTLIVWDKGQHARLTEFGEKLLWAERQAQARLAPQIEALRGDIERAFSTAFDDNAHV
HHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
LTLYASHDAALSALREQAAPRGLHLDIRFMGSVDAIAALNAGRCMMAGFHALDQPGSKSV
EEEEECCHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHCCCCHHHHHHHHHHCCCCCCHH
AAHAYRGLLKPGLHKLIGFAHRTQGLIVARNNPMGITGLADLKRAGLRYVNRAEGTGTRV
HHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHH
LLDELLAQAGMGPTDIHGYPSQEPSHAAVAQAVASGAADAGLGIEAAAREQGLGFVPLTQ
HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEECCC
ERYHLVCLKSALPEPQVQALLKELQSPEWQTSLEKLPGYSGKDAQSGKVLSLRATLPWWN
CCEEEEEEHHHCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHH
YRKEKNNKKEP
CHHHCCCCCCC
>Mature Secondary Structure
MHKVELSYLLSTERSKNALIRNPLMDMLHAVQEEGSISGASRALDLSYRHVWGALKNWEQ
CCCEEEHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
KLGRTLIVWDKGQHARLTEFGEKLLWAERQAQARLAPQIEALRGDIERAFSTAFDDNAHV
HHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
LTLYASHDAALSALREQAAPRGLHLDIRFMGSVDAIAALNAGRCMMAGFHALDQPGSKSV
EEEEECCHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHCCCCHHHHHHHHHHCCCCCCHH
AAHAYRGLLKPGLHKLIGFAHRTQGLIVARNNPMGITGLADLKRAGLRYVNRAEGTGTRV
HHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCHHH
LLDELLAQAGMGPTDIHGYPSQEPSHAAVAQAVASGAADAGLGIEAAAREQGLGFVPLTQ
HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEECCC
ERYHLVCLKSALPEPQVQALLKELQSPEWQTSLEKLPGYSGKDAQSGKVLSLRATLPWWN
CCEEEEEEHHHCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHH
YRKEKNNKKEP
CHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]