| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787595
Identifier: 91787595
GI number: 91787595
Start: 1766422
End: 1767780
Strand: Reverse
Name: 91787595
Synonym: Bpro_1713
Alternate gene names: NA
Gene position: 1767780-1766422 (Counterclockwise)
Preceding gene: 91787596
Following gene: 91787594
Centisome position: 33.99
GC content: 64.97
Gene sequence:
>1359_bases ATGAACCTCTACACCAAACTCCAGCAACGCGCCGCCGACAACCAACCCGTGCGCATCGGCCTGATAGGCGCCGGCAAATT CGGTTCCATGTACCTGGCGCAGATTCCCAGAACCCCCGGCGTGCACCTCGTCGCCATTGCCGACCTGTCGCCCGACGCGG CCCGCACCAACCTCACCCGCGTCGGCTGGAAGCCCGAAATGAGCCAGGCGGAATCGGCGCAAACGGCGATCAAGACAGGA GCGACCTGGATCACCGACGACTGGCAGGCGGTGGTCACGCATCCGCAGATCGACATCATCGTGGAATGCACAGGCAACCC GGTGGCGGCCGTCGAGCACTGCCTGCAGGCCTTTGCGCATGGCAAGCATGTGGTCAACGTGACGGTGGAAGCCGACGCCT TTTGCGGCCCGCTGCTGGCGCGCAAGGCGGCCGAAGCGGGTGTGGTGTACTCGCTGGCCTTCGGTGACCAGCCGGCGCTG ATCTGCGACCTGGTGGACTGGGCCCGCACCTGCGGGTTTCCGGTGGTGGCGGCAGGCCGCGGCCATAAATGGCTGCCGCA TTTTTGCGAATCCACGCCCGATACGGTGTGGGGCAACTACGGCCTCACGCCCGAGCAGGCCCTGCGTGGCGGACTGAACC CGAAAATGTTCAACAGCTTCCTCGATGGCTCCAAACCGTCCATCGAATGCACTGCCGTGGCCAACGCCACCGGCCTCACC GTGCCCAGCAACGGCCTGCTCTACCCGCCCGCCAGCGTGGAAGACATTCCCTTTGTGACGCGACCTATTCAAGAGGGCGG CGTGCTGGAACGCAAGGGCATGGTCGAAGTCATCTCCTCGCTGGAAGCCAATGGCCGCAAGATTCCCTACGACATCCGCA TGGGAGTCTGGGTCACGGTCGAGGCCGAAACCGACTACATCAAGAACTGCTTTGAAGAGTACAACGCGCATACCGATCCC AGCGGCCGCTATTTCACGCTGTACAAGCGCTGGCACCTGATCGGGCTGGAGGTCGGCGTGTCGGTGGCCAGCGTGGCGCT GCGCGGCGAACCGACCGGCGTGGCGACCTGCTGGAACGCCGACGTGGTGGCCACCGCCAAGCGCGACCTCAAACCCGGCG ACATGCTGGACGGCGAAGGCGGCTATACCGTCTGGGGCAAGCTGCTGCCGGCCGAAACCTCCCTGCAGATGGGCGGCCTG CCCCTGGGCCTGGCGCACCAGGTCAAGGTGGTGCGGGCGGTCAAGAAGGGCCAGAGCCTGAGCTGGGCCGATGTGGCCAT GGACACCTCGACGCCCGCCTACAAGGTGCGCCATGAAATGGAAACCATGTTCTCGCCGGCCATCAAGAAAGCTGCCTGA
Upstream 100 bases:
>100_bases GCATGTCATGCCGGACTTGATCCGGCATCCATGACCCGTTAACCACTTTAATTTCGATCCACCATGGATTGCGGGTCAAG CCCGCAATGACAGGACCCCA
Downstream 100 bases:
>100_bases CAGCCTTCTTGCGCTGCGTGCCGGATGATGGGTACATCTGCCATTAACCAGGAACCCGAATGACCGTTGAAAGCGACCCG TACGCAAGAAAAATCACCTT
Product: oxidoreductase-like protein
Products: NA
Alternate protein names: SAF Domain Protein; Homoserine Dehydrogenase; NAD(P)-Dependent Oxidoreductase; Dihydrodipicolinate Reductase; Oxidoreductase; Oxidoreductase Domain Protein; Oxidoreductase Domain-Containing Protein; Oxidoreductase-Like; StrU Protein; Saf Domain Protein; SAF Domain Family Protein
Number of amino acids: Translated: 452; Mature: 452
Protein sequence:
>452_residues MNLYTKLQQRAADNQPVRIGLIGAGKFGSMYLAQIPRTPGVHLVAIADLSPDAARTNLTRVGWKPEMSQAESAQTAIKTG ATWITDDWQAVVTHPQIDIIVECTGNPVAAVEHCLQAFAHGKHVVNVTVEADAFCGPLLARKAAEAGVVYSLAFGDQPAL ICDLVDWARTCGFPVVAAGRGHKWLPHFCESTPDTVWGNYGLTPEQALRGGLNPKMFNSFLDGSKPSIECTAVANATGLT VPSNGLLYPPASVEDIPFVTRPIQEGGVLERKGMVEVISSLEANGRKIPYDIRMGVWVTVEAETDYIKNCFEEYNAHTDP SGRYFTLYKRWHLIGLEVGVSVASVALRGEPTGVATCWNADVVATAKRDLKPGDMLDGEGGYTVWGKLLPAETSLQMGGL PLGLAHQVKVVRAVKKGQSLSWADVAMDTSTPAYKVRHEMETMFSPAIKKAA
Sequences:
>Translated_452_residues MNLYTKLQQRAADNQPVRIGLIGAGKFGSMYLAQIPRTPGVHLVAIADLSPDAARTNLTRVGWKPEMSQAESAQTAIKTG ATWITDDWQAVVTHPQIDIIVECTGNPVAAVEHCLQAFAHGKHVVNVTVEADAFCGPLLARKAAEAGVVYSLAFGDQPAL ICDLVDWARTCGFPVVAAGRGHKWLPHFCESTPDTVWGNYGLTPEQALRGGLNPKMFNSFLDGSKPSIECTAVANATGLT VPSNGLLYPPASVEDIPFVTRPIQEGGVLERKGMVEVISSLEANGRKIPYDIRMGVWVTVEAETDYIKNCFEEYNAHTDP SGRYFTLYKRWHLIGLEVGVSVASVALRGEPTGVATCWNADVVATAKRDLKPGDMLDGEGGYTVWGKLLPAETSLQMGGL PLGLAHQVKVVRAVKKGQSLSWADVAMDTSTPAYKVRHEMETMFSPAIKKAA >Mature_452_residues MNLYTKLQQRAADNQPVRIGLIGAGKFGSMYLAQIPRTPGVHLVAIADLSPDAARTNLTRVGWKPEMSQAESAQTAIKTG ATWITDDWQAVVTHPQIDIIVECTGNPVAAVEHCLQAFAHGKHVVNVTVEADAFCGPLLARKAAEAGVVYSLAFGDQPAL ICDLVDWARTCGFPVVAAGRGHKWLPHFCESTPDTVWGNYGLTPEQALRGGLNPKMFNSFLDGSKPSIECTAVANATGLT VPSNGLLYPPASVEDIPFVTRPIQEGGVLERKGMVEVISSLEANGRKIPYDIRMGVWVTVEAETDYIKNCFEEYNAHTDP SGRYFTLYKRWHLIGLEVGVSVASVALRGEPTGVATCWNADVVATAKRDLKPGDMLDGEGGYTVWGKLLPAETSLQMGGL PLGLAHQVKVVRAVKKGQSLSWADVAMDTSTPAYKVRHEMETMFSPAIKKAA
Specific function: Unknown
COG id: COG4091
COG function: function code E; Predicted homoserine dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48741; Mature: 48741
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLYTKLQQRAADNQPVRIGLIGAGKFGSMYLAQIPRTPGVHLVAIADLSPDAARTNLTR CCHHHHHHHHHCCCCCEEEEEEECCCCCCCHHEECCCCCCEEEEEEECCCCCHHHCCCEE VGWKPEMSQAESAQTAIKTGATWITDDWQAVVTHPQIDIIVECTGNPVAAVEHCLQAFAH CCCCCCHHHHHHHHHHHHCCCEEEECCCEEEEECCCEEEEEEECCCCHHHHHHHHHHHHC GKHVVNVTVEADAFCGPLLARKAAEAGVVYSLAFGDQPALICDLVDWARTCGFPVVAAGR CCEEEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEECCC GHKWLPHFCESTPDTVWGNYGLTPEQALRGGLNPKMFNSFLDGSKPSIECTAVANATGLT CCCCCHHHHCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHCCCCCCEEEEEEECCCCCE VPSNGLLYPPASVEDIPFVTRPIQEGGVLERKGMVEVISSLEANGRKIPYDIRMGVWVTV ECCCCEECCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEEEEEE EAETDYIKNCFEEYNAHTDPSGRYFTLYKRWHLIGLEVGVSVASVALRGEPTGVATCWNA ECCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEEECCCEEEEEEECCCCCCEEEEECC DVVATAKRDLKPGDMLDGEGGYTVWGKLLPAETSLQMGGLPLGLAHQVKVVRAVKKGQSL CEEEEHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC SWADVAMDTSTPAYKVRHEMETMFSPAIKKAA CCHHEEECCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNLYTKLQQRAADNQPVRIGLIGAGKFGSMYLAQIPRTPGVHLVAIADLSPDAARTNLTR CCHHHHHHHHHCCCCCEEEEEEECCCCCCCHHEECCCCCCEEEEEEECCCCCHHHCCCEE VGWKPEMSQAESAQTAIKTGATWITDDWQAVVTHPQIDIIVECTGNPVAAVEHCLQAFAH CCCCCCHHHHHHHHHHHHCCCEEEECCCEEEEECCCEEEEEEECCCCHHHHHHHHHHHHC GKHVVNVTVEADAFCGPLLARKAAEAGVVYSLAFGDQPALICDLVDWARTCGFPVVAAGR CCEEEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEECCC GHKWLPHFCESTPDTVWGNYGLTPEQALRGGLNPKMFNSFLDGSKPSIECTAVANATGLT CCCCCHHHHCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHCCCCCCEEEEEEECCCCCE VPSNGLLYPPASVEDIPFVTRPIQEGGVLERKGMVEVISSLEANGRKIPYDIRMGVWVTV ECCCCEECCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEEEEEE EAETDYIKNCFEEYNAHTDPSGRYFTLYKRWHLIGLEVGVSVASVALRGEPTGVATCWNA ECCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEEECCCEEEEEEECCCCCCEEEEECC DVVATAKRDLKPGDMLDGEGGYTVWGKLLPAETSLQMGGLPLGLAHQVKVVRAVKKGQSL CEEEEHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC SWADVAMDTSTPAYKVRHEMETMFSPAIKKAA CCHHEEECCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA