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The map label for this gene is orn [H]

Identifier: 91787582

GI number: 91787582

Start: 1749527

End: 1750090

Strand: Direct

Name: orn [H]

Synonym: Bpro_1700

Alternate gene names: 91787582

Gene position: 1749527-1750090 (Clockwise)

Preceding gene: 91787578

Following gene: 91787583

Centisome position: 33.64

GC content: 57.8

Gene sequence:

>564_bases
ATGCCTGAAATTGAATCCACACTCAAAAAATCCGACCAGAACCTTGTCTGGCTTGACTGCGAAATGACCGGCCTGGACCC
GGAAAAAGAACGGCTGATCGAAATTGCAGTGGTCGTCACCGGGCCGCAGCTCACGCCGCGCATCGAAGGCCCGGTACTGG
CCATTCACCAGTCCGACGAGCTGCTGGACCAGATGGACAACTGGAACAAGGGCACGCACGGCCGCAGCGGGCTGATTGAC
AAGGTCAAGGCCAGCACGGTCACCGAGGAGGCTGCGGAGGCCCAGTTGCTGGCGTTTTTGGCCCAGTACGTACCCAAGGG
CGGATCGCCCCTGTGCGGCAACAGCATCAGCCAGGACCGCCGTTTTCTGGTCAAGTACATGCCGAAGCTGGAAGCGTTTT
TGCACTACCGCAATGTCGATGTCAGCACGTTCAAGGAGCTGGCCAAACGCTGGCGACCCGAGGTCTATAACAGTTTCAAG
AAACGCCAGAGCCACACCGCCCTGGCCGATGTGCATGAATCGATTGACGAGCTGGAACACTACCGGCAGCATTTTTTGAA
GTGA

Upstream 100 bases:

>100_bases
ACCAGCAACCCGATCACCAGCAAGGCGGCAAACACCAGGGTAAAGACAAGTGAATAGTCGGTCATGATTCGCAGTTTAGG
CTATCGGCGAGAATCGGGAG

Downstream 100 bases:

>100_bases
TTCTTCAAGCGATTTCTGGCCATTTTCCGCGCAATGACGGAATTCGTAGCTCCTGAAATAATAGCAAACAGCCTGGCGAG
CGCCTCCCGTGGAAAGCCGT

Product: oligoribonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MPEIESTLKKSDQNLVWLDCEMTGLDPEKERLIEIAVVVTGPQLTPRIEGPVLAIHQSDELLDQMDNWNKGTHGRSGLID
KVKASTVTEEAAEAQLLAFLAQYVPKGGSPLCGNSISQDRRFLVKYMPKLEAFLHYRNVDVSTFKELAKRWRPEVYNSFK
KRQSHTALADVHESIDELEHYRQHFLK

Sequences:

>Translated_187_residues
MPEIESTLKKSDQNLVWLDCEMTGLDPEKERLIEIAVVVTGPQLTPRIEGPVLAIHQSDELLDQMDNWNKGTHGRSGLID
KVKASTVTEEAAEAQLLAFLAQYVPKGGSPLCGNSISQDRRFLVKYMPKLEAFLHYRNVDVSTFKELAKRWRPEVYNSFK
KRQSHTALADVHESIDELEHYRQHFLK
>Mature_186_residues
PEIESTLKKSDQNLVWLDCEMTGLDPEKERLIEIAVVVTGPQLTPRIEGPVLAIHQSDELLDQMDNWNKGTHGRSGLIDK
VKASTVTEEAAEAQLLAFLAQYVPKGGSPLCGNSISQDRRFLVKYMPKLEAFLHYRNVDVSTFKELAKRWRPEVYNSFKK
RQSHTALADVHESIDELEHYRQHFLK

Specific function: 3'-to-5' exoribonuclease specific for small oligoribonucleotides [H]

COG id: COG1949

COG function: function code A; Oligoribonuclease (3'->5' exoribonuclease)

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 exonuclease domain [H]

Homologues:

Organism=Homo sapiens, GI224496106, Length=175, Percent_Identity=51.4285714285714, Blast_Score=179, Evalue=2e-45,
Organism=Escherichia coli, GI87082382, Length=180, Percent_Identity=56.6666666666667, Blast_Score=231, Evalue=3e-62,
Organism=Caenorhabditis elegans, GI17557752, Length=183, Percent_Identity=45.9016393442623, Blast_Score=171, Evalue=3e-43,
Organism=Saccharomyces cerevisiae, GI6323088, Length=195, Percent_Identity=39.4871794871795, Blast_Score=129, Evalue=4e-31,
Organism=Drosophila melanogaster, GI21355135, Length=177, Percent_Identity=46.3276836158192, Blast_Score=173, Evalue=5e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006055
- InterPro:   IPR013520
- InterPro:   IPR022894
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00929 Exonuc_X-T [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 21388; Mature: 21256

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEIESTLKKSDQNLVWLDCEMTGLDPEKERLIEIAVVVTGPQLTPRIEGPVLAIHQSDE
CCCHHHHHHHCCCCEEEEEEEECCCCHHHHHHEEEEEEEECCCCCCCCCCCEEEEECCHH
LLDQMDNWNKGTHGRSGLIDKVKASTVTEEAAEAQLLAFLAQYVPKGGSPLCGNSISQDR
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
RFLVKYMPKLEAFLHYRNVDVSTFKELAKRWRPEVYNSFKKRQSHTALADVHESIDELEH
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRQHFLK
HHHHHCC
>Mature Secondary Structure 
PEIESTLKKSDQNLVWLDCEMTGLDPEKERLIEIAVVVTGPQLTPRIEGPVLAIHQSDE
CCHHHHHHHCCCCEEEEEEEECCCCHHHHHHEEEEEEEECCCCCCCCCCCEEEEECCHH
LLDQMDNWNKGTHGRSGLIDKVKASTVTEEAAEAQLLAFLAQYVPKGGSPLCGNSISQDR
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
RFLVKYMPKLEAFLHYRNVDVSTFKELAKRWRPEVYNSFKKRQSHTALADVHESIDELEH
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRQHFLK
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA