| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787580
Identifier: 91787580
GI number: 91787580
Start: 1747885
End: 1748205
Strand: Reverse
Name: 91787580
Synonym: Bpro_1698
Alternate gene names: NA
Gene position: 1748205-1747885 (Counterclockwise)
Preceding gene: 91787581
Following gene: 91787579
Centisome position: 33.62
GC content: 56.39
Gene sequence:
>321_bases ATGAGCCATCCCGTACATCAAAACCGCCGTGCCCTGAGCGCCACGGAAATCGTCACGCAACTGAGCAAGCTCAATGGCGA ACAGCCACTGGGCTGGCGACTGATCGATGGCGCGCTGGAAAAGACCTTTAGCTTCAAGAACTACTACGAAACCATAGCCT TTGTGAACGCGCTGGCCTTCATTGCCCATGCCGAAGACCATCACCCCGACCTGGCGGTGAGTTACAGCAAATGCACGGTC CGCTTCAACACGCACGATGTAAACGGCATTTCCGCCAGCGACTTCTTCTGCGCGTCCAAGGTTGACGCCCTGCTCACTTG A
Upstream 100 bases:
>100_bases CCCTCACGCCCGACCCGGTGTTTGTGAAGTTTTATTACTCGCACCCGCCCGCCTCCGAGCGGCTGGGGCGTATGAACCCT TCAACCCAAAGCGCAGCATC
Downstream 100 bases:
>100_bases GCAAACCGGCCCGCGCCTGGGCGGTGCCGGTCTCGGGCACCCGGCCAGGTCTGGTGGTGGCCGGTTTTGGCCGCCATGTG CTGGTGGAAACCGAGTCGGG
Product: pterin-4-alpha-carbinolamine dehydratase
Products: NA
Alternate protein names: PHS; 4-alpha-hydroxy-tetrahydropterin dehydratase; Pterin carbinolamine dehydratase; PCD [H]
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MSHPVHQNRRALSATEIVTQLSKLNGEQPLGWRLIDGALEKTFSFKNYYETIAFVNALAFIAHAEDHHPDLAVSYSKCTV RFNTHDVNGISASDFFCASKVDALLT
Sequences:
>Translated_106_residues MSHPVHQNRRALSATEIVTQLSKLNGEQPLGWRLIDGALEKTFSFKNYYETIAFVNALAFIAHAEDHHPDLAVSYSKCTV RFNTHDVNGISASDFFCASKVDALLT >Mature_105_residues SHPVHQNRRALSATEIVTQLSKLNGEQPLGWRLIDGALEKTFSFKNYYETIAFVNALAFIAHAEDHHPDLAVSYSKCTVR FNTHDVNGISASDFFCASKVDALLT
Specific function: Unknown
COG id: COG2154
COG function: function code H; Pterin-4a-carbinolamine dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pterin-4-alpha-carbinolamine dehydratase family [H]
Homologues:
Organism=Caenorhabditis elegans, GI115533705, Length=96, Percent_Identity=32.2916666666667, Blast_Score=62, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001533 [H]
Pfam domain/function: PF01329 Pterin_4a [H]
EC number: =4.2.1.96 [H]
Molecular weight: Translated: 11810; Mature: 11679
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHPVHQNRRALSATEIVTQLSKLNGEQPLGWRLIDGALEKTFSFKNYYETIAFVNALAF CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAHAEDHHPDLAVSYSKCTVRFNTHDVNGISASDFFCASKVDALLT HHHCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure SHPVHQNRRALSATEIVTQLSKLNGEQPLGWRLIDGALEKTFSFKNYYETIAFVNALAF CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAHAEDHHPDLAVSYSKCTVRFNTHDVNGISASDFFCASKVDALLT HHHCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA