| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787533
Identifier: 91787533
GI number: 91787533
Start: 1703402
End: 1704511
Strand: Reverse
Name: 91787533
Synonym: Bpro_1651
Alternate gene names: NA
Gene position: 1704511-1703402 (Counterclockwise)
Preceding gene: 91787539
Following gene: 91787520
Centisome position: 32.78
GC content: 57.48
Gene sequence:
>1110_bases ATGAAAAATCCTACACGTCGCGCCTGGCTTGGATTGGCTCGCGACCTGCTGGCGCTGGCCACCGTTTCGTTTGTTCTTAT TTCGCCTGTGCAGGCGGCGGGCGGTGGCAGCGGAACTGGCGCCAAGCCTACCCTCAGCACCAAGGACTTCGACTATTACC TCACGGGTGATCCAGCCGATAGGTCACCCCGCCAGCCCAAATCGCAGATGACTGTGTTGATGGGTGGAGGGCTCGACGTT GATCAGGCCTTCAAGGACATGATTGCCAAGGCTGGAGGGAGCGCTACCAACAAGATTGATGTCGTCGTCATCCGCGCTTC AGGTACAGATGGCTACAACCCCTACTTGTCCGCCATGGAAGGCGTCGACTCGGTCGAGACCCTGGTCATCAAAACGCCAA ATGGCGCTAACGATCCGAAGGTGACGAGCGTCATTCTCGGGGCAGACGTGTTGTTCATCGCCGGAGGCGACCAGTGGAAC TACATCAGTCAGTGGAACGAGACCTCCGTCGAGACGATCATCAAGACAGTGCTGCTTCCGAAAAACGTGCCTATCGGCGG AACGAGCGCGGGCCTCGCCGTGTTGGGCGCTGTAGATTTTTCGGCACAGCACGGCACGATCACTTCGTCAGATGCACTCA GCGACCCGTATAACCGCAGGCTCACCCTTGACCGTACGTTCCTGGAGACCATTCCCAAACTCCAGAATACGATCGTGGAT GCCCATCTGGTGAGCCGCGACCGCATGGGACGCCTGGTAACCTTTCTGGCGAGGATGATTCAAGATGGTATGCCCTGGAG TGCCGCACGGGCCATCGGTGTCGACGAGGGAACTGCCGTCGTGATTGATGGTGACATCGCCACGGTGTGTGCCAACAGCG GCGGAACTGGGGCAGCGTACTTCTTGAAACTGCCGCAAGACCCAGGCACTACCTTGATTGTCAAGCCTAAAACCCCGCTC GAAGTTTCGTCGGTACTTGTTGACAAGCTCACTCAGGCTGCTGGGGATCAATTCAACATGGTCAACTGGCTTCGCTACGG AGGTAGTACGTACTTGCTGTATGTCCAACGTGGCGTGCTGTATGGGGGGCCGGGCAATAATCCTTACTGA
Upstream 100 bases:
>100_bases GCGCAGACCTTCATCAAGACAAGTCCGCGAATTTCGTTGCTCAAGGTGTCCCAATACCAATAGTCTGGGCGCCATCAACT TAACGGATAGGAATAAAGAA
Downstream 100 bases:
>100_bases GCCGGCCGATTATTCAAGTGAAATGGTGCTGCAGTTCCTTTGACCTGTTAGCCATCATACGGCTGTGAGGTAGAACTCCA CCTTGCTAGCCCGCTGACCC
Product: peptidase S51, dipeptidase E
Products: NA
Alternate protein names: Cyanophycinase-Like Protein; Cyanophycinase And Related Exopeptidase-Like Protein; Cyanophycinase; Cyanophycinase Or Related Exopeptidase; Cyanophycinase And Related Exopeptidase-Like; Peptidase S
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MKNPTRRAWLGLARDLLALATVSFVLISPVQAAGGGSGTGAKPTLSTKDFDYYLTGDPADRSPRQPKSQMTVLMGGGLDV DQAFKDMIAKAGGSATNKIDVVVIRASGTDGYNPYLSAMEGVDSVETLVIKTPNGANDPKVTSVILGADVLFIAGGDQWN YISQWNETSVETIIKTVLLPKNVPIGGTSAGLAVLGAVDFSAQHGTITSSDALSDPYNRRLTLDRTFLETIPKLQNTIVD AHLVSRDRMGRLVTFLARMIQDGMPWSAARAIGVDEGTAVVIDGDIATVCANSGGTGAAYFLKLPQDPGTTLIVKPKTPL EVSSVLVDKLTQAAGDQFNMVNWLRYGGSTYLLYVQRGVLYGGPGNNPY
Sequences:
>Translated_369_residues MKNPTRRAWLGLARDLLALATVSFVLISPVQAAGGGSGTGAKPTLSTKDFDYYLTGDPADRSPRQPKSQMTVLMGGGLDV DQAFKDMIAKAGGSATNKIDVVVIRASGTDGYNPYLSAMEGVDSVETLVIKTPNGANDPKVTSVILGADVLFIAGGDQWN YISQWNETSVETIIKTVLLPKNVPIGGTSAGLAVLGAVDFSAQHGTITSSDALSDPYNRRLTLDRTFLETIPKLQNTIVD AHLVSRDRMGRLVTFLARMIQDGMPWSAARAIGVDEGTAVVIDGDIATVCANSGGTGAAYFLKLPQDPGTTLIVKPKTPL EVSSVLVDKLTQAAGDQFNMVNWLRYGGSTYLLYVQRGVLYGGPGNNPY >Mature_369_residues MKNPTRRAWLGLARDLLALATVSFVLISPVQAAGGGSGTGAKPTLSTKDFDYYLTGDPADRSPRQPKSQMTVLMGGGLDV DQAFKDMIAKAGGSATNKIDVVVIRASGTDGYNPYLSAMEGVDSVETLVIKTPNGANDPKVTSVILGADVLFIAGGDQWN YISQWNETSVETIIKTVLLPKNVPIGGTSAGLAVLGAVDFSAQHGTITSSDALSDPYNRRLTLDRTFLETIPKLQNTIVD AHLVSRDRMGRLVTFLARMIQDGMPWSAARAIGVDEGTAVVIDGDIATVCANSGGTGAAYFLKLPQDPGTTLIVKPKTPL EVSSVLVDKLTQAAGDQFNMVNWLRYGGSTYLLYVQRGVLYGGPGNNPY
Specific function: Unknown
COG id: COG4242
COG function: function code QP; Cyanophycinase and related exopeptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39089; Mature: 39089
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNPTRRAWLGLARDLLALATVSFVLISPVQAAGGGSGTGAKPTLSTKDFDYYLTGDPAD CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCEEEECCCCCC RSPRQPKSQMTVLMGGGLDVDQAFKDMIAKAGGSATNKIDVVVIRASGTDGYNPYLSAME CCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCHHHHHHC GVDSVETLVIKTPNGANDPKVTSVILGADVLFIAGGDQWNYISQWNETSVETIIKTVLLP CCCCEEEEEEECCCCCCCCCCEEEEECCEEEEEECCCCCCHHHCCCCHHHHHHHHHHHCC KNVPIGGTSAGLAVLGAVDFSAQHGTITSSDALSDPYNRRLTLDRTFLETIPKLQNTIVD CCCCCCCCCCCEEEEEEEECCCCCCEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHH AHLVSRDRMGRLVTFLARMIQDGMPWSAARAIGVDEGTAVVIDGDIATVCANSGGTGAAY HHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEECCCCCCEEEEECCEEEEEECCCCCCEEE FLKLPQDPGTTLIVKPKTPLEVSSVLVDKLTQAAGDQFNMVNWLRYGGSTYLLYVQRGVL EEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEEEEECCEE YGGPGNNPY ECCCCCCCC >Mature Secondary Structure MKNPTRRAWLGLARDLLALATVSFVLISPVQAAGGGSGTGAKPTLSTKDFDYYLTGDPAD CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCEEEECCCCCC RSPRQPKSQMTVLMGGGLDVDQAFKDMIAKAGGSATNKIDVVVIRASGTDGYNPYLSAME CCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCHHHHHHC GVDSVETLVIKTPNGANDPKVTSVILGADVLFIAGGDQWNYISQWNETSVETIIKTVLLP CCCCEEEEEEECCCCCCCCCCEEEEECCEEEEEECCCCCCHHHCCCCHHHHHHHHHHHCC KNVPIGGTSAGLAVLGAVDFSAQHGTITSSDALSDPYNRRLTLDRTFLETIPKLQNTIVD CCCCCCCCCCCEEEEEEEECCCCCCEECCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHH AHLVSRDRMGRLVTFLARMIQDGMPWSAARAIGVDEGTAVVIDGDIATVCANSGGTGAAY HHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEECCCCCCEEEEECCEEEEEECCCCCCEEE FLKLPQDPGTTLIVKPKTPLEVSSVLVDKLTQAAGDQFNMVNWLRYGGSTYLLYVQRGVL EEEECCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEEEEECCEE YGGPGNNPY ECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA