Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is yoaV [H]

Identifier: 91787518

GI number: 91787518

Start: 1690671

End: 1691678

Strand: Reverse

Name: yoaV [H]

Synonym: Bpro_1636

Alternate gene names: 91787518

Gene position: 1691678-1690671 (Counterclockwise)

Preceding gene: 91787519

Following gene: 91787508

Centisome position: 32.53

GC content: 66.47

Gene sequence:

>1008_bases
TTGACCTCATCCACCACCGGGCTGGCATCATCCGCGGCATCATCCGCGGCACCATCCGCGGCACCATCCGCGGCATCACC
CGCGACCCTGGCTGCACCCAAAAGCTGGCTGACCGATTTTGTGCTGCTCGCGGCCATCTGGGGTTCGTCCTTTCTCTTCA
TGCGCATCAGCACGGGGGAATTCGGCCCGCTGCCGACCGCCGCCGTGCGCGTGGCGATTGCCGCCCTCTTCCTGCTGCCC
ATGGTGTGGCTGCGCGGCCTGCTGCCGGAACTGAAGAAAAACTGGAAGCGGACTTTCTTCATCGGCCTGCTCAACTCCGG
CATTCCGTTTGCGTGCTTTTCGTTTGCGCTGCTGTCCATCACCACCGGGCTCTCGGCCATTCTGAACGCCACCGTGCCGA
TGTTTGGCGCGCTGGTCGCTTGGGCTTGGCTCAAGGACAAACCCAATGTCTCGCGCGTGCTGGGCCTGGTCGTCGGCTTT
GCCGGCGTGGCCATGCTGGCCTGGGACAAAGCCACCTTCAAGCCCGACGCCTCGGGCGTGGCGCCTGGCTGGGCCGTGCT
GGCCTGCCTGCTGGCCTGCGTGTGCTACGGCGTCTCGGCCAGCTACACCAAGCGCTACCTGTCCGGCCTGCCGCCGCTGG
TCACGGCCGCAGGCAGCCAGATCGGCGCCACGCTGGGCCTGGCCCTGCCGGCGCTCTGGCTGTGGCCCGCGCGCATGCCG
GGCACCTCGGCCTGGCTGGCCCTGCTGGCCGTCGGCGTGCTGTGCACCGGGCTCGCCTACATCCTGTTTTTCCGGTTGAT
CGAGAACGCCGGGCCGCAGCGTGCGCTGTCGGTAACATTTGTGGTGCCGATGTTTGCCGTGCTCTATGGCGTGCTCTTGC
TCGGCGAAGCGGTGACAACCTGGATGGTGGTATGCGCTGCCGTGATTGTGTGCGGCACGGCCCTGTCGACCGGGCTGTTG
AAGCTGCAGCGCGCACAGCCGTTGAGCACACAACAACCCAAGCCATGA

Upstream 100 bases:

>100_bases
TGCTGGGCGCCGACGGCTCGCTCACCGGCTATGCGGGCGGCCTCGACAAAAAAACAGCACTGCTCAAGCTTGAGGGTGCG
CTCATGAAGGAGACCCTGAC

Downstream 100 bases:

>100_bases
GCTCCGCGCGAAAAACCAAACTAAAGCTGAAGACTGTCAGGCCGAGAAACCCGCTGGTGGCGCCGGCTGCGCGGCGCAAG
GCGGGTGCCCACCGCAAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MTSSTTGLASSAASSAAPSAAPSAASPATLAAPKSWLTDFVLLAAIWGSSFLFMRISTGEFGPLPTAAVRVAIAALFLLP
MVWLRGLLPELKKNWKRTFFIGLLNSGIPFACFSFALLSITTGLSAILNATVPMFGALVAWAWLKDKPNVSRVLGLVVGF
AGVAMLAWDKATFKPDASGVAPGWAVLACLLACVCYGVSASYTKRYLSGLPPLVTAAGSQIGATLGLALPALWLWPARMP
GTSAWLALLAVGVLCTGLAYILFFRLIENAGPQRALSVTFVVPMFAVLYGVLLLGEAVTTWMVVCAAVIVCGTALSTGLL
KLQRAQPLSTQQPKP

Sequences:

>Translated_335_residues
MTSSTTGLASSAASSAAPSAAPSAASPATLAAPKSWLTDFVLLAAIWGSSFLFMRISTGEFGPLPTAAVRVAIAALFLLP
MVWLRGLLPELKKNWKRTFFIGLLNSGIPFACFSFALLSITTGLSAILNATVPMFGALVAWAWLKDKPNVSRVLGLVVGF
AGVAMLAWDKATFKPDASGVAPGWAVLACLLACVCYGVSASYTKRYLSGLPPLVTAAGSQIGATLGLALPALWLWPARMP
GTSAWLALLAVGVLCTGLAYILFFRLIENAGPQRALSVTFVVPMFAVLYGVLLLGEAVTTWMVVCAAVIVCGTALSTGLL
KLQRAQPLSTQQPKP
>Mature_334_residues
TSSTTGLASSAASSAAPSAAPSAASPATLAAPKSWLTDFVLLAAIWGSSFLFMRISTGEFGPLPTAAVRVAIAALFLLPM
VWLRGLLPELKKNWKRTFFIGLLNSGIPFACFSFALLSITTGLSAILNATVPMFGALVAWAWLKDKPNVSRVLGLVVGFA
GVAMLAWDKATFKPDASGVAPGWAVLACLLACVCYGVSASYTKRYLSGLPPLVTAAGSQIGATLGLALPALWLWPARMPG
TSAWLALLAVGVLCTGLAYILFFRLIENAGPQRALSVTFVVPMFAVLYGVLLLGEAVTTWMVVCAAVIVCGTALSTGLLK
LQRAQPLSTQQPKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 34937; Mature: 34806

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS00310 LAMP_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSTTGLASSAASSAAPSAAPSAASPATLAAPKSWLTDFVLLAAIWGSSFLFMRISTGE
CCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCC
FGPLPTAAVRVAIAALFLLPMVWLRGLLPELKKNWKRTFFIGLLNSGIPFACFSFALLSI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
TTGLSAILNATVPMFGALVAWAWLKDKPNVSRVLGLVVGFAGVAMLAWDKATFKPDASGV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
APGWAVLACLLACVCYGVSASYTKRYLSGLPPLVTAAGSQIGATLGLALPALWLWPARMP
CCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCC
GTSAWLALLAVGVLCTGLAYILFFRLIENAGPQRALSVTFVVPMFAVLYGVLLLGEAVTT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
WMVVCAAVIVCGTALSTGLLKLQRAQPLSTQQPKP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TSSTTGLASSAASSAAPSAAPSAASPATLAAPKSWLTDFVLLAAIWGSSFLFMRISTGE
CCCCCCHHHHHHHCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCC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HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]