| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91787505
Identifier: 91787505
GI number: 91787505
Start: 1674978
End: 1675820
Strand: Reverse
Name: 91787505
Synonym: Bpro_1623
Alternate gene names: NA
Gene position: 1675820-1674978 (Counterclockwise)
Preceding gene: 91787506
Following gene: 91787504
Centisome position: 32.23
GC content: 62.28
Gene sequence:
>843_bases ATGAGTGCAGCGCAGCCACTTCAAACAACCATGAGCGCCACCGAATTCGTCGACATCGACTGGGCAGGTCGGCCGGTGCG TATCGAGCATCAATGGGTCAACGCAGAGAAGCAGGATCGCCCCCTGATCGTGTTCTTGCACGAAGGGCTGGGATCGGTGG CCATGTGGAAGGACTTCCCGCAGGCGCTGTGTGATGCGGCCGATGTTCGCGGCCTGGTGTATTCGCGCCCCGGCTATGGA CGCTCGACGCCGCGCGCAGCCGCTGAGCGCTGGAACGCCGACTTCATGCACGCACAGGCACACGAGGTTCTGCCCGCCCT GCTGGAAGCACTGAACGTCAGGGAGAAACCCTGGCTGCTGGGCCACAGCGATGGCGGCTCCATTGCATTGCTGTACGCAT CGCGCTTTCCAGACTCGGTAGCGGGCCTGGTGGTTGTCGCTCCCCACCTGATGGTTGAAGAGTATGGCCTGGCAAGCATC CGCATCGCCCGCGAAGCCTATGCCACGACTGGCCTCAAAGAGAAACTGGCGCGCTACCACGACGATGTTGATTCCGCCTT CAAAGGGTGGAACGACATCTGGCTGGACCCCAGCTTTCCCAACTGGACCATCGAGGCCGAGCTGACTTCCATCACCTGCC CGATTCTTGCCGTGCAAGGGGTGGACGACGAATACGGCACGCTGGAACATATCCACGGCATTGCCCGCCGTCTGCCACAA ACGCAGCTGCTCGAACTCGCGCAATGCGGGCACTCGCCCCATCGCGACCAGCCTGCAGCATTGATCCGCGCCGTCACGGA ATTCATCGATCAACACCCCTGCGTTGCCGCCTCTGCGGCGTAG
Upstream 100 bases:
>100_bases CCTACAAGTACCCGCGTTTCATCGAGTTCATGACCGAACTGCCGAAAACGGCAACGGGAAAAATCCAGCGCTTTCGCTTG CGGGAACTGGAGCGCAAGGC
Downstream 100 bases:
>100_bases ACCCGAATTCCCCGCATTTTCCGCATTCCTCGTTCGCCCCTTGCTTGCCCCCTGTATTTGCCCCTTATTCGCCCAATCCA ACGGAGACATACCAATGAAA
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Hydrolase; Alpha/Beta Hydrolase; Lactonase; Hydrolase-Related Protein; Alpha/Beta Family Hydrolase; Alpha/Beta Hydrolase Fold Family Protein; Alpha/Beta Fold Family Hydrolase; Hydrolase Or Acyltransferase; Aryl-Ester Hydrolase; Alpha/Beta Hydrolase Superfamily Protein; Hydrolase Alpha/Beta Fold Family; Serine Hydrolase
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MSAAQPLQTTMSATEFVDIDWAGRPVRIEHQWVNAEKQDRPLIVFLHEGLGSVAMWKDFPQALCDAADVRGLVYSRPGYG RSTPRAAAERWNADFMHAQAHEVLPALLEALNVREKPWLLGHSDGGSIALLYASRFPDSVAGLVVVAPHLMVEEYGLASI RIAREAYATTGLKEKLARYHDDVDSAFKGWNDIWLDPSFPNWTIEAELTSITCPILAVQGVDDEYGTLEHIHGIARRLPQ TQLLELAQCGHSPHRDQPAALIRAVTEFIDQHPCVAASAA
Sequences:
>Translated_280_residues MSAAQPLQTTMSATEFVDIDWAGRPVRIEHQWVNAEKQDRPLIVFLHEGLGSVAMWKDFPQALCDAADVRGLVYSRPGYG RSTPRAAAERWNADFMHAQAHEVLPALLEALNVREKPWLLGHSDGGSIALLYASRFPDSVAGLVVVAPHLMVEEYGLASI RIAREAYATTGLKEKLARYHDDVDSAFKGWNDIWLDPSFPNWTIEAELTSITCPILAVQGVDDEYGTLEHIHGIARRLPQ TQLLELAQCGHSPHRDQPAALIRAVTEFIDQHPCVAASAA >Mature_279_residues SAAQPLQTTMSATEFVDIDWAGRPVRIEHQWVNAEKQDRPLIVFLHEGLGSVAMWKDFPQALCDAADVRGLVYSRPGYGR STPRAAAERWNADFMHAQAHEVLPALLEALNVREKPWLLGHSDGGSIALLYASRFPDSVAGLVVVAPHLMVEEYGLASIR IAREAYATTGLKEKLARYHDDVDSAFKGWNDIWLDPSFPNWTIEAELTSITCPILAVQGVDDEYGTLEHIHGIARRLPQT QLLELAQCGHSPHRDQPAALIRAVTEFIDQHPCVAASAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30947; Mature: 30816
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAAQPLQTTMSATEFVDIDWAGRPVRIEHQWVNAEKQDRPLIVFLHEGLGSVAMWKDFP CCCCCHHHHHHHHHHEEEECCCCCCEEEEEHCCCCCCCCCCEEEEEECCCCCHHHHHHHH QALCDAADVRGLVYSRPGYGRSTPRAAAERWNADFMHAQAHEVLPALLEALNVREKPWLL HHHHHHHHHCCEEECCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEE GHSDGGSIALLYASRFPDSVAGLVVVAPHLMVEEYGLASIRIAREAYATTGLKEKLARYH EECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHH DDVDSAFKGWNDIWLDPSFPNWTIEAELTSITCPILAVQGVDDEYGTLEHIHGIARRLPQ CCHHHHHCCCCEEEECCCCCCEEEEEEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCH TQLLELAQCGHSPHRDQPAALIRAVTEFIDQHPCVAASAA HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SAAQPLQTTMSATEFVDIDWAGRPVRIEHQWVNAEKQDRPLIVFLHEGLGSVAMWKDFP CCCCHHHHHHHHHHEEEECCCCCCEEEEEHCCCCCCCCCCEEEEEECCCCCHHHHHHHH QALCDAADVRGLVYSRPGYGRSTPRAAAERWNADFMHAQAHEVLPALLEALNVREKPWLL HHHHHHHHHCCEEECCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEE GHSDGGSIALLYASRFPDSVAGLVVVAPHLMVEEYGLASIRIAREAYATTGLKEKLARYH EECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHH DDVDSAFKGWNDIWLDPSFPNWTIEAELTSITCPILAVQGVDDEYGTLEHIHGIARRLPQ CCHHHHHCCCCEEEECCCCCCEEEEEEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCH TQLLELAQCGHSPHRDQPAALIRAVTEFIDQHPCVAASAA HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA