| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787494
Identifier: 91787494
GI number: 91787494
Start: 1663296
End: 1664207
Strand: Direct
Name: 91787494
Synonym: Bpro_1610
Alternate gene names: NA
Gene position: 1663296-1664207 (Clockwise)
Preceding gene: 91787493
Following gene: 91787495
Centisome position: 31.98
GC content: 65.02
Gene sequence:
>912_bases ATGCTCACTAAAAAACGCACCCTTCAAGCCTGCGTGCTCGCATTGGCATTGGGCGTCATTGCGGCGTCCCCGATTCGCGC TGGCGAGCCTGTCATGCTGATGCATGTCCACGGGCTGTCCTACAGCGCTGACGGCAAGCAGCTCCTGATCCCCAGCCACC ATGGCCTGGCCGTGTACGCGGACGGGCGCTGGTCCAAGGCCGCAGGGCCGGCGCACGACTACATGGGCTACTCCGCCACG CGCGACGCGTTGTACAGCAGCGGGCACCCGGCACCGGGTTCCGGACTGACCAACCCTTTCGGCCTGATCAAGAGCCGCGA CGGCGGCAAGAACTGGCAGCAGTTGGGGCTCACGGGCGAATCGGACTTCCATATGCTGGCGACCAGCTACGCGACCAACG CGGTGTACGTGCTCAATCACCAGCCGAACTCCCGCATGAGCCAGGCCGGCATCTACCACACACTAAACGATGGCCTGAAG TGGACGCGCGCCGCCGCCAGGGGGCTGGGTCCCAAGCTCAACAGCCTGGTCGTGCACCCCACGGACGCCAAAGTCGTCGC TGCCGGCATGGACGACGGGCTGTATCTGTCCCGGGATTCGGCCGAGAGCTTCGAGCGGCTGGCGGGTGGCCAGCGCGTAC TCGCCCAAAGCTTCGACCTGGACGGTCAGCATCTGTGGTTCAGCACCCATGCAGGCAAGGCGGCGCTGGCGAGGATCGCA TTGAAGGCCGGTTCCAAGGCAGAGGAGGTCACTGTCCCGGCACTGACGGAGGACGCCGTGGCCTACATCGCGCAGAACCC CGTCCGGCGATCCGAGATCGCCATCGCGACCTTCAAACGAAGCGTGTTTCTCAGCAAGGACCAGGGGCGGACCTGGACGC AGATCGCGAAGGACGGAACAACGCATCAGTGA
Upstream 100 bases:
>100_bases ATCTCAAGTCACCGTGTACGGAAGGGTCACCGGCGCCTGCCCCCCAACCAGGAGGCACCCGTCCGTTCATGCACGTTCCC ACTAACCACGAAGAATCACC
Downstream 100 bases:
>100_bases TTCAAAGAACGACCCTGCACTCAGGATCGTTGTGATCGTGCTGGCGCCCATGGGTGACGTAGATGGCCGGCGACGGCATC AACGACGCGCTGGCTCTGGC
Product: BNR repeat-containing glycosyl hydrolase
Products: NA
Alternate protein names: BNR Repeat-Containing Glycosyl Hydrolase; BNR Repeat Domain Protein; Group-Specific Protein; BNR Repeat-Containing Protein; Glycosyl Hydrolase BNR Repeat-Containing Protein; Glycosyl Hydrolase; BNR/Asp-Box Repeat Domain Protein
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MLTKKRTLQACVLALALGVIAASPIRAGEPVMLMHVHGLSYSADGKQLLIPSHHGLAVYADGRWSKAAGPAHDYMGYSAT RDALYSSGHPAPGSGLTNPFGLIKSRDGGKNWQQLGLTGESDFHMLATSYATNAVYVLNHQPNSRMSQAGIYHTLNDGLK WTRAAARGLGPKLNSLVVHPTDAKVVAAGMDDGLYLSRDSAESFERLAGGQRVLAQSFDLDGQHLWFSTHAGKAALARIA LKAGSKAEEVTVPALTEDAVAYIAQNPVRRSEIAIATFKRSVFLSKDQGRTWTQIAKDGTTHQ
Sequences:
>Translated_303_residues MLTKKRTLQACVLALALGVIAASPIRAGEPVMLMHVHGLSYSADGKQLLIPSHHGLAVYADGRWSKAAGPAHDYMGYSAT RDALYSSGHPAPGSGLTNPFGLIKSRDGGKNWQQLGLTGESDFHMLATSYATNAVYVLNHQPNSRMSQAGIYHTLNDGLK WTRAAARGLGPKLNSLVVHPTDAKVVAAGMDDGLYLSRDSAESFERLAGGQRVLAQSFDLDGQHLWFSTHAGKAALARIA LKAGSKAEEVTVPALTEDAVAYIAQNPVRRSEIAIATFKRSVFLSKDQGRTWTQIAKDGTTHQ >Mature_303_residues MLTKKRTLQACVLALALGVIAASPIRAGEPVMLMHVHGLSYSADGKQLLIPSHHGLAVYADGRWSKAAGPAHDYMGYSAT RDALYSSGHPAPGSGLTNPFGLIKSRDGGKNWQQLGLTGESDFHMLATSYATNAVYVLNHQPNSRMSQAGIYHTLNDGLK WTRAAARGLGPKLNSLVVHPTDAKVVAAGMDDGLYLSRDSAESFERLAGGQRVLAQSFDLDGQHLWFSTHAGKAALARIA LKAGSKAEEVTVPALTEDAVAYIAQNPVRRSEIAIATFKRSVFLSKDQGRTWTQIAKDGTTHQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32443; Mature: 32443
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTKKRTLQACVLALALGVIAASPIRAGEPVMLMHVHGLSYSADGKQLLIPSHHGLAVYA CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCEECCCCCEEEEECCCCEEEEE DGRWSKAAGPAHDYMGYSATRDALYSSGHPAPGSGLTNPFGLIKSRDGGKNWQQLGLTGE CCCCCCCCCCHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHEECCCCCCCHHHHCCCCC SDFHMLATSYATNAVYVLNHQPNSRMSQAGIYHTLNDGLKWTRAAARGLGPKLNSLVVHP CCCEEEEEECCCCEEEEEECCCCCHHHHCCCEEEHHCCHHHHHHHHHCCCCCCCCEEECC TDAKVVAAGMDDGLYLSRDSAESFERLAGGQRVLAQSFDLDGQHLWFSTHAGKAALARIA CCCEEEEECCCCCEEEECCCHHHHHHHCCCHHHHHHHCCCCCCEEEEECCCCHHHHHHHH LKAGSKAEEVTVPALTEDAVAYIAQNPVRRSEIAIATFKRSVFLSKDQGRTWTQIAKDGT HHCCCCCCEEECCCCCHHHHHHHHCCCCCHHHEEEEEEEEEEEEECCCCCHHHHHHCCCC THQ CCC >Mature Secondary Structure MLTKKRTLQACVLALALGVIAASPIRAGEPVMLMHVHGLSYSADGKQLLIPSHHGLAVYA CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCEECCCCCEEEEECCCCEEEEE DGRWSKAAGPAHDYMGYSATRDALYSSGHPAPGSGLTNPFGLIKSRDGGKNWQQLGLTGE CCCCCCCCCCHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHEECCCCCCCHHHHCCCCC SDFHMLATSYATNAVYVLNHQPNSRMSQAGIYHTLNDGLKWTRAAARGLGPKLNSLVVHP CCCEEEEEECCCCEEEEEECCCCCHHHHCCCEEEHHCCHHHHHHHHHCCCCCCCCEEECC TDAKVVAAGMDDGLYLSRDSAESFERLAGGQRVLAQSFDLDGQHLWFSTHAGKAALARIA CCCEEEEECCCCCEEEECCCHHHHHHHCCCHHHHHHHCCCCCCEEEEECCCCHHHHHHHH LKAGSKAEEVTVPALTEDAVAYIAQNPVRRSEIAIATFKRSVFLSKDQGRTWTQIAKDGT HHCCCCCCEEECCCCCHHHHHHHHCCCCCHHHEEEEEEEEEEEEECCCCCHHHHHHCCCC THQ CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA