Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

Click here to switch to the map view.

The map label for this gene is yffB [H]

Identifier: 91787486

GI number: 91787486

Start: 1653582

End: 1653932

Strand: Reverse

Name: yffB [H]

Synonym: Bpro_1602

Alternate gene names: 91787486

Gene position: 1653932-1653582 (Counterclockwise)

Preceding gene: 91787497

Following gene: 91787485

Centisome position: 31.8

GC content: 64.67

Gene sequence:

>351_bases
ATGATCATCCTCTACGGCATTCCCAACTGCGATACTGTCAAAAAGGCACGCGCCTGGCTCACCGCCCAGGGCGTGAACTA
CCAGTTCCACGACTTTAAAAAACAGGGCGTCCCGCCAGAAAGACTCGCAGTGTGGACCCAGGCGGCGGGTTGGGACAAGC
TGCTCAACCGGCAGGGCACCACCTGGCGCAAACTGGACCCGGCGACGCAGGCGGCCGTGCACGACGCCGCTACCGCCCAG
ACGCTGATGCGGGCCAATCCCAGCGTCATCAAGCGCCCGGTCGTAGAGTGGGACACGGGCATCACGCTGGGGTTTGATGT
GGCCGGCTGGGCTGCGCGGGTGCGCACCTGA

Upstream 100 bases:

>100_bases
GCCGGAATCCACCGGATCAGCTATTTATTTGATAGCTTCTGGTCCCCGTCGAATCAGGGTAAAAAGCCAAATTCCTCTAA
CACTCTGCAAGAATAAACAG

Downstream 100 bases:

>100_bases
CGACTGCGGCAGCCAAGGCGACTGCCAGCCAGCTTTACAGTGAATTTGCAGAACTCTGCCGGCCAAAACGGCTCTGATTC
ACTAAAATCAGGGTAATTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MIILYGIPNCDTVKKARAWLTAQGVNYQFHDFKKQGVPPERLAVWTQAAGWDKLLNRQGTTWRKLDPATQAAVHDAATAQ
TLMRANPSVIKRPVVEWDTGITLGFDVAGWAARVRT

Sequences:

>Translated_116_residues
MIILYGIPNCDTVKKARAWLTAQGVNYQFHDFKKQGVPPERLAVWTQAAGWDKLLNRQGTTWRKLDPATQAAVHDAATAQ
TLMRANPSVIKRPVVEWDTGITLGFDVAGWAARVRT
>Mature_116_residues
MIILYGIPNCDTVKKARAWLTAQGVNYQFHDFKKQGVPPERLAVWTQAAGWDKLLNRQGTTWRKLDPATQAAVHDAATAQ
TLMRANPSVIKRPVVEWDTGITLGFDVAGWAARVRT

Specific function: Unknown

COG id: COG1393

COG function: function code P; Arsenate reductase and related proteins, glutaredoxin family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ArsC family [H]

Homologues:

Organism=Escherichia coli, GI1788815, Length=95, Percent_Identity=50.5263157894737, Blast_Score=111, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006660
- InterPro:   IPR012336
- InterPro:   IPR012335
- InterPro:   IPR006504 [H]

Pfam domain/function: PF03960 ArsC [H]

EC number: NA

Molecular weight: Translated: 12945; Mature: 12945

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIILYGIPNCDTVKKARAWLTAQGVNYQFHDFKKQGVPPERLAVWTQAAGWDKLLNRQGT
CEEEEECCCCCHHHHHHHHHEECCCCCCCCCHHHCCCCHHHHEEHHCCCCHHHHHCCCCC
TWRKLDPATQAAVHDAATAQTLMRANPSVIKRPVVEWDTGITLGFDVAGWAARVRT
CCEECCCHHHHHHHHHHHHHHHHHCCHHHHHCCCEECCCCEEEECCCCCCCCCCCC
>Mature Secondary Structure
MIILYGIPNCDTVKKARAWLTAQGVNYQFHDFKKQGVPPERLAVWTQAAGWDKLLNRQGT
CEEEEECCCCCHHHHHHHHHEECCCCCCCCCHHHCCCCHHHHEEHHCCCCHHHHHCCCCC
TWRKLDPATQAAVHDAATAQTLMRANPSVIKRPVVEWDTGITLGFDVAGWAARVRT
CCEECCCHHHHHHHHHHHHHHHHHCCHHHHHCCCEECCCCEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1644752; 9205837; 9278503; 10493123 [H]