| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787454
Identifier: 91787454
GI number: 91787454
Start: 1616181
End: 1616609
Strand: Direct
Name: 91787454
Synonym: Bpro_1565
Alternate gene names: NA
Gene position: 1616181-1616609 (Clockwise)
Preceding gene: 91787453
Following gene: 91787455
Centisome position: 31.08
GC content: 57.58
Gene sequence:
>429_bases TTGCGCATAACCCCGCTCGAGGTCACTTCTGATTTACAAGGTTTAGGGAGTGTCTATAATCACAATAACTTGCGATTTAT CTTGGTTAAGTCACAGCATATGAGAGTTTCTTCTTCCACCAGTCGACTTCCGTTTGAAGCGGAGGATGTGTTGCGCGCGC TCGCCGGCCGCGTTCGTGTAGCCCGGAAAGCGCGCGGCCTGACTCAGCCTGATTTGGCGGCAAAGGCCGGAATCAGCACC AACACCCTGTTGGCTATGGAGAAAGGCACTTCCAGTGTCCAGCTCGGGTACTGGCTCCAAGTTTTGTGGGCCCTTGACCT CTTGAGCGGCTTTGCGGAACAGGTTGGCCTCCTCGGACGAGAAGCCGGGGACGTCGCACTGCTGGAGGCCCAACTTCCCC ACCGCGTCCGCGGCGCAGGCACGCGATGA
Upstream 100 bases:
>100_bases CCGGTGCACCGCATCCAGTACCGGTTGATTCGAACCGGCCGGAAGCGCTGGTGTTCATCGGTTCTTAGGTCTTTGAGTTT GCACTCACCCAACCCGCTGG
Downstream 100 bases:
>100_bases GCGCCACAGAAAAGCCGGTTTGGGTGTGGCTACCCGGCCAGGCGCAACCAGTGCATTGCGGCACATTCTCCCTGCAGGGA GGCGTGGGGACTTTTCACTA
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MRITPLEVTSDLQGLGSVYNHNNLRFILVKSQHMRVSSSTSRLPFEAEDVLRALAGRVRVARKARGLTQPDLAAKAGIST NTLLAMEKGTSSVQLGYWLQVLWALDLLSGFAEQVGLLGREAGDVALLEAQLPHRVRGAGTR
Sequences:
>Translated_142_residues MRITPLEVTSDLQGLGSVYNHNNLRFILVKSQHMRVSSSTSRLPFEAEDVLRALAGRVRVARKARGLTQPDLAAKAGIST NTLLAMEKGTSSVQLGYWLQVLWALDLLSGFAEQVGLLGREAGDVALLEAQLPHRVRGAGTR >Mature_142_residues MRITPLEVTSDLQGLGSVYNHNNLRFILVKSQHMRVSSSTSRLPFEAEDVLRALAGRVRVARKARGLTQPDLAAKAGIST NTLLAMEKGTSSVQLGYWLQVLWALDLLSGFAEQVGLLGREAGDVALLEAQLPHRVRGAGTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15434; Mature: 15434
Theoretical pI: Translated: 10.82; Mature: 10.82
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRITPLEVTSDLQGLGSVYNHNNLRFILVKSQHMRVSSSTSRLPFEAEDVLRALAGRVRV CCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCEEECCCCCCCCCCHHHHHHHHHHHHHH ARKARGLTQPDLAAKAGISTNTLLAMEKGTSSVQLGYWLQVLWALDLLSGFAEQVGLLGR HHHHCCCCCCCHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC EAGDVALLEAQLPHRVRGAGTR CCCCEEEEECCCCHHCCCCCCC >Mature Secondary Structure MRITPLEVTSDLQGLGSVYNHNNLRFILVKSQHMRVSSSTSRLPFEAEDVLRALAGRVRV CCCCCCHHHHHHHHHHHHHCCCCEEEEEEECCCEEECCCCCCCCCCHHHHHHHHHHHHHH ARKARGLTQPDLAAKAGISTNTLLAMEKGTSSVQLGYWLQVLWALDLLSGFAEQVGLLGR HHHHCCCCCCCHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC EAGDVALLEAQLPHRVRGAGTR CCCCEEEEECCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA