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The map label for this gene is hupA [H]

Identifier: 91787441

GI number: 91787441

Start: 1602836

End: 1603147

Strand: Reverse

Name: hupA [H]

Synonym: Bpro_1551

Alternate gene names: 91787441

Gene position: 1603147-1602836 (Counterclockwise)

Preceding gene: 91787442

Following gene: 91787440

Centisome position: 30.83

GC content: 56.41

Gene sequence:

>312_bases
ATGAACCGTGCCGAACTAATCGAATCCATCGCCGCAGAAACCGACCTTTCCAAAGCAGCCACAGGTCGCGTGCTGGATGT
GCTGATTGATACTATCCAGAAGACAGTGAAGAAGGGGGATGCCGTGCAGCTTGTCGGATTTGGAACGTTCAAGTCCACGA
AACGCTCCGCGCGCACCGGAAAGAATCCACGTACGGGCGAAGCCGTGAAGATCCCGGCGACGACGGTGCCTAAATTTGTG
GCCGGCGCGAAGTTCAAGGCTGTGGTGGATCCAAAGGCCGCGCAGCGCAAAGCTGCAAAAGCTGCCAAGTAA

Upstream 100 bases:

>100_bases
GAGACTGGCCTACGCAGACCAGGTGTCAACCGCACTGGATGCGGAATGCCTGCTGCGCTATAGAATCGTGCCTCCTTTTT
TATTACCGAGAATTCCCACT

Downstream 100 bases:

>100_bases
TCTGGACTGACTGATGGCCGCCTCGGGTGATGAGCCCCAGGCGGTTTTCTTTTGCCCTTTGCATTTTGGAGGGTTGACGT
GCGCAGTTTTTGTGAGATTC

Product: histone-like protein DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MNRAELIESIAAETDLSKAATGRVLDVLIDTIQKTVKKGDAVQLVGFGTFKSTKRSARTGKNPRTGEAVKIPATTVPKFV
AGAKFKAVVDPKAAQRKAAKAAK

Sequences:

>Translated_103_residues
MNRAELIESIAAETDLSKAATGRVLDVLIDTIQKTVKKGDAVQLVGFGTFKSTKRSARTGKNPRTGEAVKIPATTVPKFV
AGAKFKAVVDPKAAQRKAAKAAK
>Mature_103_residues
MNRAELIESIAAETDLSKAATGRVLDVLIDTIQKTVKKGDAVQLVGFGTFKSTKRSARTGKNPRTGEAVKIPATTVPKFV
AGAKFKAVVDPKAAQRKAAKAAK

Specific function: Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions [H]

COG id: COG0776

COG function: function code L; Bacterial nucleoid DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial histone-like protein family [H]

Homologues:

Organism=Escherichia coli, GI1786644, Length=90, Percent_Identity=51.1111111111111, Blast_Score=96, Evalue=5e-22,
Organism=Escherichia coli, GI1790433, Length=89, Percent_Identity=48.314606741573, Blast_Score=88, Evalue=1e-19,
Organism=Escherichia coli, GI1788005, Length=90, Percent_Identity=32.2222222222222, Blast_Score=60, Evalue=4e-11,

Paralogues:

None

Copy number: 860 Molecules/Cell In: Growth-Phase, Minimal Media (Based on E. coli). 2040 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000119
- InterPro:   IPR020816
- InterPro:   IPR010992 [H]

Pfam domain/function: PF00216 Bac_DNA_binding [H]

EC number: NA

Molecular weight: Translated: 10852; Mature: 10852

Theoretical pI: Translated: 11.20; Mature: 11.20

Prosite motif: PS00045 HISTONE_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRAELIESIAAETDLSKAATGRVLDVLIDTIQKTVKKGDAVQLVGFGTFKSTKRSARTG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCC
KNPRTGEAVKIPATTVPKFVAGAKFKAVVDPKAAQRKAAKAAK
CCCCCCCEEECCCCHHHHHHCCCCCEEEECCHHHHHHHHHCCC
>Mature Secondary Structure
MNRAELIESIAAETDLSKAATGRVLDVLIDTIQKTVKKGDAVQLVGFGTFKSTKRSARTG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCC
KNPRTGEAVKIPATTVPKFVAGAKFKAVVDPKAAQRKAAKAAK
CCCCCCCEEECCCCHHHHHHCCCCCEEEECCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10419967 [H]