| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787400
Identifier: 91787400
GI number: 91787400
Start: 1561588
End: 1562973
Strand: Direct
Name: 91787400
Synonym: Bpro_1506
Alternate gene names: NA
Gene position: 1561588-1562973 (Clockwise)
Preceding gene: 91787399
Following gene: 91787401
Centisome position: 30.03
GC content: 62.19
Gene sequence:
>1386_bases ATGACCAAATTGCAAGCCACCAGGATCGAGGCGCTAAAAGGAAATTTCAAGGGGCAAGTGATTCTCCCCGACGACGATCT TTACGAAAGCGCCCGCAAAGTCTGGAACGCGACGATCGACAAGCATCCAGCGCTGATTGCGCGCTGCGCCACCACGTCGG ACGTCGTTGGCGCGGTGAACTTCGCGAAGGATAACGGCCTCGTGCTCGCCGTTCGTGGCGGCGGGCACAACATAGCGGGC AGTGCGTTGTGCGACGACGGTATCATCATTGACCTCTCGCAGATGAAGGCCGCGCACGTTGATGCCGGTTCGCTCCGGGG AACTATCGAGGGCGGCGCCACGCTCGCGGACTTCGATGCCGCTACCCAGGCTCACGGCCTGGCCCTACCGCTCGGCATCA ACTCCACCACCGGTGTCGCGGGTCTGACGCTCGGCGGCGGCTTCGGCTGGCTCAGTCGCAAATACGGCATGACCATTGAC AACCTTGAGTCTGCCGAGGTGGTCACCGCAGCCGGCGAGGTGGTGCGCGCCAGCGCGACCGAACACCCCGACCTCTTCTG GGCGCTGCGGGGCGGTAGCGGCAATTTCGGCGTTGTTACCCGCTTTGAGTTTCGACTCCACCCTGTCGGACCGAACGTTC TGAGCGGCCTGATTGTTTACCCGCTTTCCGAGGCGAAGGCGGTGCTGCAGCAGTACCGCGAATTCATGGCGAAGGCGCCG GACGAACTCTCGGTATGGGTCGTCCTGCGCCAGGCGCCGCCTCTGCCCTTCCTCTCCGAAAAGGTCCACGGCAAGGAGAT CATTGCGCTGGCGTTGCTCTACGCGGGTGACCCCAAGCAAGGTGAGTCGCTTATCGAGCCGCTGCGCAAGTTCGGCACTC CCCTGGGCGAGCACGTCGGCGTGCAACCGTACACCGCCTGGCAACAGGCTTTCGACCCGCTGCTCACCCCCGGCGCACGC AATTACTGGAAGTCGCACAATTTCTCGGTGCTCGACGACGGGCTGTTCGAAGCCGTCATTGAGTACATCAAGAAGCTGCC GTCGCCCCAGTGCGAGATTTTCTTTGGCGCCATCGGCGGCGCGACGATGCGGCCAGCGCCTGATTCGTCCGCGTACGCCC ACCGTGACGCCCGGTTTGTGATGAACGTCCACGGCCGTTGGACCGATCCGGCCGACGATGAGCGCTGCATAGGCTGGGCA CGCGACTATTTCAAGGCATCTGCACCCTTCGCCAGCGGCGGCGTTTACGTCAATTTCCTTACTGCTGACGAGGGTGATCG CGTGAAAGCTGCCTATGGCCAGAACTACGATCGCCTTGCCCAGATCAAGCGCAAGTATGACCCTACGAACCTCTTCAGCA CGAACCAGAATATTAAGCCCGCCTGA
Upstream 100 bases:
>100_bases CAGGGCGACAGGTGCCGCATGGGGAAGATGTTCGGAGTCGCCCAAACCGCTATTGTGAGTCGGGCGCCGCCAGCCCTACA GTACAACCAGGGAGTAAGCC
Downstream 100 bases:
>100_bases TTCTTGGCACTGCTATCCACGCCGCGTGGCGCATCAGAAGTACGCGCCATCCGGCGTCGGCGCATCGGCCCTGCGTTGCG GGTTGGCCGGGAAGTGCTGA
Product: FAD linked oxidase-like protein
Products: NA
Alternate protein names: 6-HDNO [H]
Number of amino acids: Translated: 461; Mature: 460
Protein sequence:
>461_residues MTKLQATRIEALKGNFKGQVILPDDDLYESARKVWNATIDKHPALIARCATTSDVVGAVNFAKDNGLVLAVRGGGHNIAG SALCDDGIIIDLSQMKAAHVDAGSLRGTIEGGATLADFDAATQAHGLALPLGINSTTGVAGLTLGGGFGWLSRKYGMTID NLESAEVVTAAGEVVRASATEHPDLFWALRGGSGNFGVVTRFEFRLHPVGPNVLSGLIVYPLSEAKAVLQQYREFMAKAP DELSVWVVLRQAPPLPFLSEKVHGKEIIALALLYAGDPKQGESLIEPLRKFGTPLGEHVGVQPYTAWQQAFDPLLTPGAR NYWKSHNFSVLDDGLFEAVIEYIKKLPSPQCEIFFGAIGGATMRPAPDSSAYAHRDARFVMNVHGRWTDPADDERCIGWA RDYFKASAPFASGGVYVNFLTADEGDRVKAAYGQNYDRLAQIKRKYDPTNLFSTNQNIKPA
Sequences:
>Translated_461_residues MTKLQATRIEALKGNFKGQVILPDDDLYESARKVWNATIDKHPALIARCATTSDVVGAVNFAKDNGLVLAVRGGGHNIAG SALCDDGIIIDLSQMKAAHVDAGSLRGTIEGGATLADFDAATQAHGLALPLGINSTTGVAGLTLGGGFGWLSRKYGMTID NLESAEVVTAAGEVVRASATEHPDLFWALRGGSGNFGVVTRFEFRLHPVGPNVLSGLIVYPLSEAKAVLQQYREFMAKAP DELSVWVVLRQAPPLPFLSEKVHGKEIIALALLYAGDPKQGESLIEPLRKFGTPLGEHVGVQPYTAWQQAFDPLLTPGAR NYWKSHNFSVLDDGLFEAVIEYIKKLPSPQCEIFFGAIGGATMRPAPDSSAYAHRDARFVMNVHGRWTDPADDERCIGWA RDYFKASAPFASGGVYVNFLTADEGDRVKAAYGQNYDRLAQIKRKYDPTNLFSTNQNIKPA >Mature_460_residues TKLQATRIEALKGNFKGQVILPDDDLYESARKVWNATIDKHPALIARCATTSDVVGAVNFAKDNGLVLAVRGGGHNIAGS ALCDDGIIIDLSQMKAAHVDAGSLRGTIEGGATLADFDAATQAHGLALPLGINSTTGVAGLTLGGGFGWLSRKYGMTIDN LESAEVVTAAGEVVRASATEHPDLFWALRGGSGNFGVVTRFEFRLHPVGPNVLSGLIVYPLSEAKAVLQQYREFMAKAPD ELSVWVVLRQAPPLPFLSEKVHGKEIIALALLYAGDPKQGESLIEPLRKFGTPLGEHVGVQPYTAWQQAFDPLLTPGARN YWKSHNFSVLDDGLFEAVIEYIKKLPSPQCEIFFGAIGGATMRPAPDSSAYAHRDARFVMNVHGRWTDPADDERCIGWAR DYFKASAPFASGGVYVNFLTADEGDRVKAAYGQNYDRLAQIKRKYDPTNLFSTNQNIKPA
Specific function: Unknown
COG id: COG0277
COG function: function code C; FAD/FMN-containing dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012951 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR016168 - InterPro: IPR006094 - InterPro: IPR006093 [H]
Pfam domain/function: PF08031 BBE; PF01565 FAD_binding_4 [H]
EC number: =1.5.3.6 [H]
Molecular weight: Translated: 49803; Mature: 49672
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: PS00862 OX2_COVAL_FAD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLQATRIEALKGNFKGQVILPDDDLYESARKVWNATIDKHPALIARCATTSDVVGAVN CCCCCHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCHHEEECCCCCHHHEEEE FAKDNGLVLAVRGGGHNIAGSALCDDGIIIDLSQMKAAHVDAGSLRGTIEGGATLADFDA EECCCCEEEEEECCCCCCCCCEEECCCEEEEHHHCCHHHCCCCCCCEEECCCCEEECCCH ATQAHGLALPLGINSTTGVAGLTLGGGFGWLSRKYGMTIDNLESAEVVTAAGEVVRASAT HHCCCCEEEEECCCCCCCCEEEEECCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCC EHPDLFWALRGGSGNFGVVTRFEFRLHPVGPNVLSGLIVYPLSEAKAVLQQYREFMAKAP CCCCEEEEEECCCCCEEEEEEEEEEEECCCHHHHCCEEEEECHHHHHHHHHHHHHHHCCC DELSVWVVLRQAPPLPFLSEKVHGKEIIALALLYAGDPKQGESLIEPLRKFGTPLGEHVG CCEEEEEEEECCCCCCHHHHHCCCHHEEEEEEEECCCCCCCHHHHHHHHHHCCCCHHHCC VQPYTAWQQAFDPLLTPGARNYWKSHNFSVLDDGLFEAVIEYIKKLPSPQCEIFFGAIGG CCCHHHHHHHHHHHCCCCCHHHHCCCCCCEECCHHHHHHHHHHHHCCCCCEEEEEEECCC ATMRPAPDSSAYAHRDARFVMNVHGRWTDPADDERCIGWARDYFKASAPFASGGVYVNFL CCCCCCCCCCCHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEE TADEGDRVKAAYGQNYDRLAQIKRKYDPTNLFSTNQNIKPA ECCCCCEEEHHHCCCHHHHHHHHHHCCCCCEECCCCCCCCC >Mature Secondary Structure TKLQATRIEALKGNFKGQVILPDDDLYESARKVWNATIDKHPALIARCATTSDVVGAVN CCCCHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCHHEEECCCCCHHHEEEE FAKDNGLVLAVRGGGHNIAGSALCDDGIIIDLSQMKAAHVDAGSLRGTIEGGATLADFDA EECCCCEEEEEECCCCCCCCCEEECCCEEEEHHHCCHHHCCCCCCCEEECCCCEEECCCH ATQAHGLALPLGINSTTGVAGLTLGGGFGWLSRKYGMTIDNLESAEVVTAAGEVVRASAT HHCCCCEEEEECCCCCCCCEEEEECCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCC EHPDLFWALRGGSGNFGVVTRFEFRLHPVGPNVLSGLIVYPLSEAKAVLQQYREFMAKAP CCCCEEEEEECCCCCEEEEEEEEEEEECCCHHHHCCEEEEECHHHHHHHHHHHHHHHCCC DELSVWVVLRQAPPLPFLSEKVHGKEIIALALLYAGDPKQGESLIEPLRKFGTPLGEHVG CCEEEEEEEECCCCCCHHHHHCCCHHEEEEEEEECCCCCCCHHHHHHHHHHCCCCHHHCC VQPYTAWQQAFDPLLTPGARNYWKSHNFSVLDDGLFEAVIEYIKKLPSPQCEIFFGAIGG CCCHHHHHHHHHHHCCCCCHHHHCCCCCCEECCHHHHHHHHHHHHCCCCCEEEEEEECCC ATMRPAPDSSAYAHRDARFVMNVHGRWTDPADDERCIGWARDYFKASAPFASGGVYVNFL CCCCCCCCCCCHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEE TADEGDRVKAAYGQNYDRLAQIKRKYDPTNLFSTNQNIKPA ECCCCCEEEHHHCCCHHHHHHHHHHCCCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3622516; 2680607; 2115879 [H]