Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91787371

Identifier: 91787371

GI number: 91787371

Start: 1529090

End: 1529986

Strand: Reverse

Name: 91787371

Synonym: Bpro_1477

Alternate gene names: NA

Gene position: 1529986-1529090 (Counterclockwise)

Preceding gene: 91787372

Following gene: 91787370

Centisome position: 29.42

GC content: 65.66

Gene sequence:

>897_bases
TTGCACCAGGAAACCAACGAAAACATGAAAACCCAAGCCACCACCCCCGCAGGCCGCAGGGCCAGCGCCGCCTTTCCCCG
CTTGACCGTCGTGCTGACCTTCCTGATGGAGAACTGGTCCGTCGGCAAGGCGCCGCCCTATTCGCCCATGACCAGCCCGC
CCAAGGCCGGCGAGATCGACCGAGCCGGCATTCTCTGGGCCAATTACGGCGGGCGATCCGGCATTGCCAGGCTGATGCGG
ATCGCCGAACGCCACGGCGTGTCAGGAACGGTCTGCGTGAACGCGCGCTCGGCGGAGCTGTTTCCCGAGACGGTCAGGCA
CATCGTGAAGTCGGGCTTTGAACTGGGCGGCCACAACTATGCGCAAGACGAGGTGCTGTCCGGCCTGAACGAGGCCGACG
AGCGCGCGCTGATCCAGAAGAGCCTGCGCATCCTGCAGGAAGTCTCTAGCGTGCGCCCCACCGGCTGGCTGAGCTCCACC
ATCGCGACCACGGAGCGCACGGCCGACCTGCTGACCCAGGAGGGCCTGCTCTGGCACGGCGACTACAACGACATCGACCA
GCCGCAGCAGGTGGCGACGCCGTCCGGCCGCATCGTGGCGATTCCGCACAGCGACTATGCCGACAACCGCGTGCTGCGCG
GCGCGCCGGACGACTGGTACCACTGCTACAAGGACATGTTCGACTACCTCTACCGCCAGGAGTCGGGCTCGCTCATCAAC
ATCACCATGCACGGCAACTTCGGCGGCCGGCCGCTGATGTCGGCGCAGCTGGACAAGCTGCTGACCTACATGCTGGCCCA
TGACGAGGTCTGGGTGCCGCGGCATGACGAGTTGGCCCATTGGGTCAACGAGCACGGCATAGCCGAAACGCCCTTCATCC
AGCGCTTTGCGGCCTGA

Upstream 100 bases:

>100_bases
GCCGTCGAAGCCTCGCCCGAAGAGTTCGCCAGGCTGCTGGCCGACAGCACCCAGGTCTACAAGTCCATCGTCCAGAAAGC
CGGCATCACGCCCGAATGAA

Downstream 100 bases:

>100_bases
GCCGACGCCCACCCACCGTAACAACACCAACAGGAAGCCCGAGACATGATCACCGAGTCTGAACACCGGCAGGCCGCGGA
CGCGCTGCTGGAAGCCGGCC

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: Polysaccharide Deacetylase Family Protein; Urate Catabolism Protein; Chitin Deacetylase; Chitooligosaccharide Deacetylase; Xylanase/Chitin Deacetylase; Polysaccharide Deacetylase Family; Chitooligosaccharide Deacetylase Protein; Polysaccharide Deacetylase Domain Protein; Hydrolase; Polysaccharide Deacetylase Protein Pda4B; Carbohydrate Esterase Family 4 Domain Protein; Chitinase; Deacetylase Protein; Polysaccharide Deacetylase Domain-Containing Protein; Uricase; Saccharide Deacetylase Slightly; Deacetylase

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MHQETNENMKTQATTPAGRRASAAFPRLTVVLTFLMENWSVGKAPPYSPMTSPPKAGEIDRAGILWANYGGRSGIARLMR
IAERHGVSGTVCVNARSAELFPETVRHIVKSGFELGGHNYAQDEVLSGLNEADERALIQKSLRILQEVSSVRPTGWLSST
IATTERTADLLTQEGLLWHGDYNDIDQPQQVATPSGRIVAIPHSDYADNRVLRGAPDDWYHCYKDMFDYLYRQESGSLIN
ITMHGNFGGRPLMSAQLDKLLTYMLAHDEVWVPRHDELAHWVNEHGIAETPFIQRFAA

Sequences:

>Translated_298_residues
MHQETNENMKTQATTPAGRRASAAFPRLTVVLTFLMENWSVGKAPPYSPMTSPPKAGEIDRAGILWANYGGRSGIARLMR
IAERHGVSGTVCVNARSAELFPETVRHIVKSGFELGGHNYAQDEVLSGLNEADERALIQKSLRILQEVSSVRPTGWLSST
IATTERTADLLTQEGLLWHGDYNDIDQPQQVATPSGRIVAIPHSDYADNRVLRGAPDDWYHCYKDMFDYLYRQESGSLIN
ITMHGNFGGRPLMSAQLDKLLTYMLAHDEVWVPRHDELAHWVNEHGIAETPFIQRFAA
>Mature_298_residues
MHQETNENMKTQATTPAGRRASAAFPRLTVVLTFLMENWSVGKAPPYSPMTSPPKAGEIDRAGILWANYGGRSGIARLMR
IAERHGVSGTVCVNARSAELFPETVRHIVKSGFELGGHNYAQDEVLSGLNEADERALIQKSLRILQEVSSVRPTGWLSST
IATTERTADLLTQEGLLWHGDYNDIDQPQQVATPSGRIVAIPHSDYADNRVLRGAPDDWYHCYKDMFDYLYRQESGSLIN
ITMHGNFGGRPLMSAQLDKLLTYMLAHDEVWVPRHDELAHWVNEHGIAETPFIQRFAA

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33299; Mature: 33299

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHQETNENMKTQATTPAGRRASAAFPRLTVVLTFLMENWSVGKAPPYSPMTSPPKAGEID
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
RAGILWANYGGRSGIARLMRIAERHGVSGTVCVNARSAELFPETVRHIVKSGFELGGHNY
CCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCHHCCCCCC
AQDEVLSGLNEADERALIQKSLRILQEVSSVRPTGWLSSTIATTERTADLLTQEGLLWHG
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEC
DYNDIDQPQQVATPSGRIVAIPHSDYADNRVLRGAPDDWYHCYKDMFDYLYRQESGSLIN
CCCCCCCCHHHCCCCCCEEEECCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCCEEE
ITMHGNFGGRPLMSAQLDKLLTYMLAHDEVWVPRHDELAHWVNEHGIAETPFIQRFAA
EEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCC
>Mature Secondary Structure
MHQETNENMKTQATTPAGRRASAAFPRLTVVLTFLMENWSVGKAPPYSPMTSPPKAGEID
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
RAGILWANYGGRSGIARLMRIAERHGVSGTVCVNARSAELFPETVRHIVKSGFELGGHNY
CCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHCCHHCCCCCC
AQDEVLSGLNEADERALIQKSLRILQEVSSVRPTGWLSSTIATTERTADLLTQEGLLWHG
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCEEEEC
DYNDIDQPQQVATPSGRIVAIPHSDYADNRVLRGAPDDWYHCYKDMFDYLYRQESGSLIN
CCCCCCCCHHHCCCCCCEEEECCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCCEEE
ITMHGNFGGRPLMSAQLDKLLTYMLAHDEVWVPRHDELAHWVNEHGIAETPFIQRFAA
EEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA