Click here to switch to the map view.

The map label for this gene is ygaF [C]

Identifier: 91787362

GI number: 91787362

Start: 1519179

End: 1520306

Strand: Reverse

Name: ygaF [C]

Synonym: Bpro_1468

Alternate gene names: 91787362

Gene position: 1520306-1519179 (Counterclockwise)

Preceding gene: 91787364

Following gene: 91787361

Centisome position: 29.24

GC content: 70.12

Gene sequence:

>1128_bases
ATGCGAGAATATGACATTGTTATCTTTGGCGCCGGCATCGCCGGTGCATCCCTGGCCTGGCGCCTGGCCGGACAGCGCAG
TGTGCTGCTGCTCGAACGCGAAGCCCAGCCCGGCTACCACTCCACCGGCCGCTCGGCCGCCATGTTCATGGAGAGCTACG
GCCCCCCCATGGTGCGGGCGCTGACCCGTGCCAGCCGGACGTTTTACGAACAGCCGCCCGAAGGCTTTGCCACCGCACCG
CTCATGCAGCCCCGGGGTGCGCTGTACCTCGCCACGCCCGGGCAGGAAGCATTGATGGCGCAGACCCGCGCCGAACTGGC
CGCCAGCTGCCCCGACCTTGAAGTGCTGGACGCCCGTACCACCCTGGAGCGCGTGCCCTGCCTGCGGCCCGAAATGGTGC
ACGGTGCCCTGTACGACCCCGGTGCCCAGGACATCGACGTGCATGCACTGCATCAGGGCTTTTTGCGGGGCTTCCGGCAG
CGCGGCGGCGAGTTGCGCACCAGCGTCACCCTGATCCAGGCCAGCCATGACGGACAGGGCTGGGCGCTGCAGTTTGCCGA
CGGCCAGACGCTGCGGGCACGCACCGTGGTCAATGCCGCCGGCGCCTGGGCCGACGAGCTGGCGGGCCTGTTTGGCGCCG
CCCCCATCGGGCTGGTGCCGCACCGGCGCAGCGCCTTCACCTTCAAGGCGCCCGAGGGCGTGGACGTGTCCGGCTGGCCG
GCCGTGGTGGGCATGGACGAGAGCTATTACTTCAAGCCCGACGCCGGCCAGTTGCTGGGCTCGCCCGCCAATGCCGACCC
GACGGTTGCGCACGACGTGGTGCCCGAAGAGCTGGACATTGCCACGGGCATTTACCAGATCGAAAGCGTCTCGACCCTGA
CCATTCGCCGTCCCGGCAGCACCTGGGCCGGGCTGCGCTCGTTTGTCCCCGACGGCGAGATGGTGATTGGCTGGGATGGC
GCCTGCCCCGGCTTTTTCTGGCTGGCGGCCCAGGGCGGCTACGGTATCCAGAGCGCGGCCGGCGCCAGCGCACTGGCCGA
TGCCCTGCTGCGCAACGTGGCCCTGCCGGCAGAGCTGGCCCGGCACGGCGTCGAAGCGGCCGCGCTGTCACCGGCCCGCC
TGCGTTGA

Upstream 100 bases:

>100_bases
GGGGTTCGGGCGGAGCGTGGCATGGTGTTTTCCCTTGGTTACACAGAAAATGGATGAATGGCACTGGACAGGCACGATTC
TCGCATGTGAGAATTCTCAA

Downstream 100 bases:

>100_bases
TAACGCCAGGTTGATTGACACCGGGACATCACGACCATGAACAAGCCGTCCACGTCTTCCATGCATTCCGCCACCGGAAC
CGCGCTTGATTCGGCGCTGG

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: Oxidoreductase; Glycine/D-Amino Acid Oxidase; Amino Acid Oxidase; FAD-Dependent Oxidoreductase; FAD Dependent Oxidoreductase Domain-Containing Protein; Glycine Oxidase; FAD Dependent Oxidoreductase Family; Oxidase; FAD-Dependent Glycerol-3-Phosphate Dehydrogenase Protein; Fad Dependent Oxidoreductase

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MREYDIVIFGAGIAGASLAWRLAGQRSVLLLEREAQPGYHSTGRSAAMFMESYGPPMVRALTRASRTFYEQPPEGFATAP
LMQPRGALYLATPGQEALMAQTRAELAASCPDLEVLDARTTLERVPCLRPEMVHGALYDPGAQDIDVHALHQGFLRGFRQ
RGGELRTSVTLIQASHDGQGWALQFADGQTLRARTVVNAAGAWADELAGLFGAAPIGLVPHRRSAFTFKAPEGVDVSGWP
AVVGMDESYYFKPDAGQLLGSPANADPTVAHDVVPEELDIATGIYQIESVSTLTIRRPGSTWAGLRSFVPDGEMVIGWDG
ACPGFFWLAAQGGYGIQSAAGASALADALLRNVALPAELARHGVEAAALSPARLR

Sequences:

>Translated_375_residues
MREYDIVIFGAGIAGASLAWRLAGQRSVLLLEREAQPGYHSTGRSAAMFMESYGPPMVRALTRASRTFYEQPPEGFATAP
LMQPRGALYLATPGQEALMAQTRAELAASCPDLEVLDARTTLERVPCLRPEMVHGALYDPGAQDIDVHALHQGFLRGFRQ
RGGELRTSVTLIQASHDGQGWALQFADGQTLRARTVVNAAGAWADELAGLFGAAPIGLVPHRRSAFTFKAPEGVDVSGWP
AVVGMDESYYFKPDAGQLLGSPANADPTVAHDVVPEELDIATGIYQIESVSTLTIRRPGSTWAGLRSFVPDGEMVIGWDG
ACPGFFWLAAQGGYGIQSAAGASALADALLRNVALPAELARHGVEAAALSPARLR
>Mature_375_residues
MREYDIVIFGAGIAGASLAWRLAGQRSVLLLEREAQPGYHSTGRSAAMFMESYGPPMVRALTRASRTFYEQPPEGFATAP
LMQPRGALYLATPGQEALMAQTRAELAASCPDLEVLDARTTLERVPCLRPEMVHGALYDPGAQDIDVHALHQGFLRGFRQ
RGGELRTSVTLIQASHDGQGWALQFADGQTLRARTVVNAAGAWADELAGLFGAAPIGLVPHRRSAFTFKAPEGVDVSGWP
AVVGMDESYYFKPDAGQLLGSPANADPTVAHDVVPEELDIATGIYQIESVSTLTIRRPGSTWAGLRSFVPDGEMVIGWDG
ACPGFFWLAAQGGYGIQSAAGASALADALLRNVALPAELARHGVEAAALSPARLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI24797151, Length=377, Percent_Identity=26.790450928382, Blast_Score=70, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI71994045, Length=272, Percent_Identity=26.8382352941176, Blast_Score=71, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39938; Mature: 39938

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREYDIVIFGAGIAGASLAWRLAGQRSVLLLEREAQPGYHSTGRSAAMFMESYGPPMVRA
CCCEEEEEEECCCCCCHHEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCHHHHH
LTRASRTFYEQPPEGFATAPLMQPRGALYLATPGQEALMAQTRAELAASCPDLEVLDART
HHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCEEECHHH
TLERVPCLRPEMVHGALYDPGAQDIDVHALHQGFLRGFRQRGGELRTSVTLIQASHDGQG
HHHHCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCC
WALQFADGQTLRARTVVNAAGAWADELAGLFGAAPIGLVPHRRSAFTFKAPEGVDVSGWP
EEEEECCCCEEEHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCC
AVVGMDESYYFKPDAGQLLGSPANADPTVAHDVVPEELDIATGIYQIESVSTLTIRRPGS
EEEECCCCEEECCCHHHHCCCCCCCCCCHHHHCCCCHHHHHHCEEEECCEEEEEEECCCC
TWAGLRSFVPDGEMVIGWDGACPGFFWLAAQGGYGIQSAAGASALADALLRNVALPAELA
CHHHHHHHCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCHHHH
RHGVEAAALSPARLR
HCCCHHHCCCHHHCC
>Mature Secondary Structure
MREYDIVIFGAGIAGASLAWRLAGQRSVLLLEREAQPGYHSTGRSAAMFMESYGPPMVRA
CCCEEEEEEECCCCCCHHEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCHHHHH
LTRASRTFYEQPPEGFATAPLMQPRGALYLATPGQEALMAQTRAELAASCPDLEVLDART
HHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCEEECHHH
TLERVPCLRPEMVHGALYDPGAQDIDVHALHQGFLRGFRQRGGELRTSVTLIQASHDGQG
HHHHCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCC
WALQFADGQTLRARTVVNAAGAWADELAGLFGAAPIGLVPHRRSAFTFKAPEGVDVSGWP
EEEEECCCCEEEHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCC
AVVGMDESYYFKPDAGQLLGSPANADPTVAHDVVPEELDIATGIYQIESVSTLTIRRPGS
EEEECCCCEEECCCHHHHCCCCCCCCCCHHHHCCCCHHHHHHCEEEECCEEEEEEECCCC
TWAGLRSFVPDGEMVIGWDGACPGFFWLAAQGGYGIQSAAGASALADALLRNVALPAELA
CHHHHHHHCCCCCEEEEECCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCHHHH
RHGVEAAALSPARLR
HCCCHHHCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA