Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is fliY [H]

Identifier: 91787334

GI number: 91787334

Start: 1488892

End: 1489713

Strand: Reverse

Name: fliY [H]

Synonym: Bpro_1440

Alternate gene names: 91787334

Gene position: 1489713-1488892 (Counterclockwise)

Preceding gene: 91787335

Following gene: 91787333

Centisome position: 28.65

GC content: 59.73

Gene sequence:

>822_bases
ATGCCGCCAGGGCTGGCCCATCGCAACCGCGGCATGGATTTTTTTGACATTACAGAACGGAAACTCACCATGAAATTCGC
AACGCTTGCAACTTCTCTTGCCGTCACCTTTGCACTATCGCTGTCAGGCCCGGCTTCGGCGCAGACGGTGCTGAAGGTCG
GATCCACGCCGACCGGCAGCCCTTTCACTTTCCTGGACACCAAGACCAACACCATTGACGGCGTGATGGTCGACATCGTC
AATGCGGTGGCCAAGGAATCGGGCTTCGGGGTACAGATCGAACCCATGCAGTTCTCGGCGCTGATCTCCTCGCTGACTTC
CAAGCGCATCGATTTGATCTCGGCGGCGATGTTCATCACGCCGACGCGCCAGGAAGTCGTGGACTTTTCGCTGCCGATCT
ACAGCTACGGCGAAGGCGTGGTTGTGTTGAAGCAGGACACGGTCGCCTACCAGAGCTTCGCCGACATGAAAGGCAAGCGG
GTCGGGGTGCAGGTCGGCACGGCCTTCGTGGAACCGTTGCAAAAGAGCGGGATGTTTTCAGAGGTCAAGCTCTACGAAAC
CACGCCCGACCTGATGCGCGACGCCAACGCCGGGCGCATCGACGCGGGCGTGCTGGACTACCCGATTGCCGCCTTCGCCG
TGGCCAAGGGACAGTTTCCCAACCTGCGCATGGTCACCAGCTTCAAGCCGACCATGGTCAACAGCATCGGCATGGCCACC
CGAAAAGGCGACACCGAGCTGATGGGCAAGGTGAATGTCGCCGTGACCAAGCTCAAGGCCAACGGCACCATTGACGCCAT
CCTGAAAAAGTGGGGCCTGTGA

Upstream 100 bases:

>100_bases
TCACGACGGTGCTTTGGGCCATCACCGGCACGCTCAGGTAGCTGGCCGCATTGATCCCATCGACCCCATCGACCCATTTC
TCCCACGGCCACCCGGAAAA

Downstream 100 bases:

>100_bases
GCCTGACCCCGACCCACTCAGCAATCTACTGAAAAACGAATACCCATGATCCAGTTTCTGCACCATGCACGGGAGTTCAT
GCCCATCCTGCTCCAGGGGG

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: CBP; Protein fliY; Sulfate starvation-induced protein 7; SSI7 [H]

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MPPGLAHRNRGMDFFDITERKLTMKFATLATSLAVTFALSLSGPASAQTVLKVGSTPTGSPFTFLDTKTNTIDGVMVDIV
NAVAKESGFGVQIEPMQFSALISSLTSKRIDLISAAMFITPTRQEVVDFSLPIYSYGEGVVVLKQDTVAYQSFADMKGKR
VGVQVGTAFVEPLQKSGMFSEVKLYETTPDLMRDANAGRIDAGVLDYPIAAFAVAKGQFPNLRMVTSFKPTMVNSIGMAT
RKGDTELMGKVNVAVTKLKANGTIDAILKKWGL

Sequences:

>Translated_273_residues
MPPGLAHRNRGMDFFDITERKLTMKFATLATSLAVTFALSLSGPASAQTVLKVGSTPTGSPFTFLDTKTNTIDGVMVDIV
NAVAKESGFGVQIEPMQFSALISSLTSKRIDLISAAMFITPTRQEVVDFSLPIYSYGEGVVVLKQDTVAYQSFADMKGKR
VGVQVGTAFVEPLQKSGMFSEVKLYETTPDLMRDANAGRIDAGVLDYPIAAFAVAKGQFPNLRMVTSFKPTMVNSIGMAT
RKGDTELMGKVNVAVTKLKANGTIDAILKKWGL
>Mature_272_residues
PPGLAHRNRGMDFFDITERKLTMKFATLATSLAVTFALSLSGPASAQTVLKVGSTPTGSPFTFLDTKTNTIDGVMVDIVN
AVAKESGFGVQIEPMQFSALISSLTSKRIDLISAAMFITPTRQEVVDFSLPIYSYGEGVVVLKQDTVAYQSFADMKGKRV
GVQVGTAFVEPLQKSGMFSEVKLYETTPDLMRDANAGRIDAGVLDYPIAAFAVAKGQFPNLRMVTSFKPTMVNSIGMATR
KGDTELMGKVNVAVTKLKANGTIDAILKKWGL

Specific function: Part of a binding-protein-dependent transport system for cystine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788228, Length=221, Percent_Identity=30.7692307692308, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1787088, Length=250, Percent_Identity=31.2, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1787085, Length=251, Percent_Identity=30.2788844621514, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1787031, Length=249, Percent_Identity=30.5220883534137, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1788649, Length=256, Percent_Identity=28.90625, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1788648, Length=231, Percent_Identity=28.1385281385281, Blast_Score=78, Evalue=7e-16,

Paralogues:

None

Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015683
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 29368; Mature: 29237

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPGLAHRNRGMDFFDITERKLTMKFATLATSLAVTFALSLSGPASAQTVLKVGSTPTGS
CCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEEEEECCCCCCC
PFTFLDTKTNTIDGVMVDIVNAVAKESGFGVQIEPMQFSALISSLTSKRIDLISAAMFIT
CEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHEEEC
PTRQEVVDFSLPIYSYGEGVVVLKQDTVAYQSFADMKGKRVGVQVGTAFVEPLQKSGMFS
CCHHHHHEECCCEEECCCCEEEEECCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCEE
EVKLYETTPDLMRDANAGRIDAGVLDYPIAAFAVAKGQFPNLRMVTSFKPTMVNSIGMAT
EEEEEECCHHHHHCCCCCCCCCCHHHCCHHHHHHHCCCCCCEEEEECCCCHHHHHHCCCC
RKGDTELMGKVNVAVTKLKANGTIDAILKKWGL
CCCCHHHHEEEEEEEEEEECCCCHHHHHHHHCC
>Mature Secondary Structure 
PPGLAHRNRGMDFFDITERKLTMKFATLATSLAVTFALSLSGPASAQTVLKVGSTPTGS
CCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEEEEECCCCCCC
PFTFLDTKTNTIDGVMVDIVNAVAKESGFGVQIEPMQFSALISSLTSKRIDLISAAMFIT
CEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHEEEC
PTRQEVVDFSLPIYSYGEGVVVLKQDTVAYQSFADMKGKRVGVQVGTAFVEPLQKSGMFS
CCHHHHHEECCCEEECCCCEEEEECCCHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCEE
EVKLYETTPDLMRDANAGRIDAGVLDYPIAAFAVAKGQFPNLRMVTSFKPTMVNSIGMAT
EEEEEECCHHHHHCCCCCCCCCCHHHCCHHHHHHHCCCCCCEEEEECCCCHHHHHHCCCC
RKGDTELMGKVNVAVTKLKANGTIDAILKKWGL
CCCCHHHHEEEEEEEEEEECCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]