Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is cphA [H]

Identifier: 91787311

GI number: 91787311

Start: 1457880

End: 1460111

Strand: Reverse

Name: cphA [H]

Synonym: Bpro_1416

Alternate gene names: 91787311

Gene position: 1460111-1457880 (Counterclockwise)

Preceding gene: 91787314

Following gene: 91787310

Centisome position: 28.08

GC content: 68.23

Gene sequence:

>2232_bases
ATGAGCAAACAGGACGACATCAAGCTACTGCGCATCAACTACCTGCGTGGCCCGAATATCTGGACTTACCGGCCCGTGCT
TGAAGTCTGGCTGGATCTGGGGGGCCTGGAAGACTGCCCCTCCCATCTGCTGCCCGGCTTCAACGACCGGCTGGTCGCCC
TGCTGCCCGCCCTGCTGGAGCACCACTGCGGTGTCGGCGAGCGCGGCGGCTTTATCCAGCGCCTGCGCGAAGGCACCTGG
GCCGGCCATGTGCTGGAGCATGTAGTCATTGAACTGCTGAACCTGGCCGACATGCCGACCGGCTTTGGCCAGACGCGCAG
CACATCGAAACGCGGCGTCTACCGCATGGTGTTCCGGGCGCGCGACGAACAGGTGGCCCGCACGGCGCTGGCCGAAGGCC
ACCGGCTGCTGATGGCCGCCATCAACGACGAAGCCTTCGGCCCGGCCGACGTACAGGTTGCGGTGGAGAAAATCCGCGCC
AAGGTCGATGACTGCTACCTTGGCCCCAGCACCGCGTCCATCGTGGCGGCCGCCACCGACCGCCGCATTCCGCACATTCG
CCTGAACGACGGCAACCTGGTCCAGCTCGGCTACGGCGCCAGCCAGCGCCGCATCTGGACCGCCGAGACCGACCTCACCA
GCGCCATTGCCGAAGGCATTGCCCACGACAAGGACCTGACCAAAAGCCTGCTGGCCACCTGCGGCGTGCCCGTGCCGGAC
GGCGAAATCGTCAGCACCGCGGAGCGGGCCTGGGAAGCTGCGCAAGATATCGGCCTGCCCGTGGTCGTCAAGCCCTCCGA
CGGCAACCACGGCCGCGGCGTGTCACTGGACCTCAATACCCGGGAAGAAGTGGAAGCGGCTTTCCGCGTGGCCGAGCCGC
ATGGCAGCGAGGTGATGGTGGAGCGCTTCATACGCGGCCATGAACACCGCCTGCTGGTGGTGGGCGGCCGCGTGGTGGCC
GCAGCGCGGGGCGAGACCGCCACCGTCACCGGCGACGGCCACTCGACCGTGATGCAGCTGGTGGACGCCCAGCTCAACAC
TGACCCGCGGCGCGGCCTGGAAGAAGACTTTCCCCTCAGCCGCATCGAAACCGACAAGGACGAAGCCATTGTGCTGGACC
TGCAGCGCCAGGGCCTGACGCCCCACGCCATTCCGGCCGCTGGCCGGCAGGTGCTGATCCAGCGCAACGGCAATGTCGCC
ATCGACTGCACCGACGAAGTCCACCCCGAAGTCGACCACATCGTGTCGCTCGCCGCGCGCGTGGTGGGCCTGGACATCGC
CGGCGTGGATGTGGTGGCGCAGGACATCTCGCGCCCGCTGCACGCACAGGGCGGCGCCATCGTTGAAGTCAATGCCGGCC
CCGGGCTGCTGATGCACCTCAAGCCCGCCGAGGGTTCGCCACGGCCGGTGGGCCGCGCCATCTGCGACCACCTGTTTCCC
GACTCGCCGGATCACGCTCAACAGGACGGCCTGAACAGCAGCCCCTGCGGCCGCATTCCCATCGTCGGCATTGCCGGCTC
CGAGGGCACCCAGCGCGTAGCCCGCCTGGTGGCCTGGCTGCTGCACCTGTCGGGCCGCTACACCGGCCTGGCCTGCCGCG
ACGGCCTGTTCCTCGACCAGCGCTGCGTCGATGCCTCCGACAGCGCCCACTGGGAGGCCGGCCAGCGCCTGCTGATCAAC
CGCACCGTGCAGGCCGCCGTGTTTGAAAACGGCGCCGAAACCATCTTGCGCAGCGGCCTGGCCTACGACCGCTGCCAGGT
GGGCGTGGTCACCGACCTCGGCGGCGCCGCCGGCCTGGCCGAATTCGACATCACCGAAGACGAGCAGATGTTCCGCGTCA
TGCGCTCGCAGGTCGACGTGGTGCTGCCCGGCGGCGCAGCGGTGCTCAATGCCGCCCATGAGCGCGTCGTCGACATGCAT
GACCTGTGCGACGGCGAAGTCATCTTCTACAGCACCGACCCCAAGGCGGCCGCCATTGCCAGGCATTGCGCCCAAGGCGG
CCGCGCCCTGTATGTGCGGCAAGACCAGATCGTGCTGGCCACCGGCACCACCGAAGCCTTTCTGCCCGGCCTAGGCAAGC
TGTCGGCCTGGCGCGCGCGGCGCGACCTGAACGACAGCACGCTGCTGGCCGCCGTCGGCGCCGCCTGGGCATTGGGCATA
CCGCTCAATCTGATCGGCGCAGGCCTGGAAGCCTTTGAAACCACCCCTAAAACTGCCGGGAGTGCAGAGTAA

Upstream 100 bases:

>100_bases
AGACCTTCCAAGGCCTCGAACTGAAATCTATCGGCACGAACCGGCGGCCTGCGTGGGCAGGACGGAAAAATACGCTAACG
TGCCGACAATTTTGCAAAAC

Downstream 100 bases:

>100_bases
TGGAAGTGTCCCGCATTCGGGCCCTGCGCGGGCCCAACCTCTGGAGCCGGCACACGGCGCTGGAAGCCATCGTCGCCTGC
ACGGCGGCCGAACGGTCTAT

Product: cyanophycin synthetase

Products: NA

Alternate protein names: Cyanophycin synthase [H]

Number of amino acids: Translated: 743; Mature: 742

Protein sequence:

>743_residues
MSKQDDIKLLRINYLRGPNIWTYRPVLEVWLDLGGLEDCPSHLLPGFNDRLVALLPALLEHHCGVGERGGFIQRLREGTW
AGHVLEHVVIELLNLADMPTGFGQTRSTSKRGVYRMVFRARDEQVARTALAEGHRLLMAAINDEAFGPADVQVAVEKIRA
KVDDCYLGPSTASIVAAATDRRIPHIRLNDGNLVQLGYGASQRRIWTAETDLTSAIAEGIAHDKDLTKSLLATCGVPVPD
GEIVSTAERAWEAAQDIGLPVVVKPSDGNHGRGVSLDLNTREEVEAAFRVAEPHGSEVMVERFIRGHEHRLLVVGGRVVA
AARGETATVTGDGHSTVMQLVDAQLNTDPRRGLEEDFPLSRIETDKDEAIVLDLQRQGLTPHAIPAAGRQVLIQRNGNVA
IDCTDEVHPEVDHIVSLAARVVGLDIAGVDVVAQDISRPLHAQGGAIVEVNAGPGLLMHLKPAEGSPRPVGRAICDHLFP
DSPDHAQQDGLNSSPCGRIPIVGIAGSEGTQRVARLVAWLLHLSGRYTGLACRDGLFLDQRCVDASDSAHWEAGQRLLIN
RTVQAAVFENGAETILRSGLAYDRCQVGVVTDLGGAAGLAEFDITEDEQMFRVMRSQVDVVLPGGAAVLNAAHERVVDMH
DLCDGEVIFYSTDPKAAAIARHCAQGGRALYVRQDQIVLATGTTEAFLPGLGKLSAWRARRDLNDSTLLAAVGAAWALGI
PLNLIGAGLEAFETTPKTAGSAE

Sequences:

>Translated_743_residues
MSKQDDIKLLRINYLRGPNIWTYRPVLEVWLDLGGLEDCPSHLLPGFNDRLVALLPALLEHHCGVGERGGFIQRLREGTW
AGHVLEHVVIELLNLADMPTGFGQTRSTSKRGVYRMVFRARDEQVARTALAEGHRLLMAAINDEAFGPADVQVAVEKIRA
KVDDCYLGPSTASIVAAATDRRIPHIRLNDGNLVQLGYGASQRRIWTAETDLTSAIAEGIAHDKDLTKSLLATCGVPVPD
GEIVSTAERAWEAAQDIGLPVVVKPSDGNHGRGVSLDLNTREEVEAAFRVAEPHGSEVMVERFIRGHEHRLLVVGGRVVA
AARGETATVTGDGHSTVMQLVDAQLNTDPRRGLEEDFPLSRIETDKDEAIVLDLQRQGLTPHAIPAAGRQVLIQRNGNVA
IDCTDEVHPEVDHIVSLAARVVGLDIAGVDVVAQDISRPLHAQGGAIVEVNAGPGLLMHLKPAEGSPRPVGRAICDHLFP
DSPDHAQQDGLNSSPCGRIPIVGIAGSEGTQRVARLVAWLLHLSGRYTGLACRDGLFLDQRCVDASDSAHWEAGQRLLIN
RTVQAAVFENGAETILRSGLAYDRCQVGVVTDLGGAAGLAEFDITEDEQMFRVMRSQVDVVLPGGAAVLNAAHERVVDMH
DLCDGEVIFYSTDPKAAAIARHCAQGGRALYVRQDQIVLATGTTEAFLPGLGKLSAWRARRDLNDSTLLAAVGAAWALGI
PLNLIGAGLEAFETTPKTAGSAE
>Mature_742_residues
SKQDDIKLLRINYLRGPNIWTYRPVLEVWLDLGGLEDCPSHLLPGFNDRLVALLPALLEHHCGVGERGGFIQRLREGTWA
GHVLEHVVIELLNLADMPTGFGQTRSTSKRGVYRMVFRARDEQVARTALAEGHRLLMAAINDEAFGPADVQVAVEKIRAK
VDDCYLGPSTASIVAAATDRRIPHIRLNDGNLVQLGYGASQRRIWTAETDLTSAIAEGIAHDKDLTKSLLATCGVPVPDG
EIVSTAERAWEAAQDIGLPVVVKPSDGNHGRGVSLDLNTREEVEAAFRVAEPHGSEVMVERFIRGHEHRLLVVGGRVVAA
ARGETATVTGDGHSTVMQLVDAQLNTDPRRGLEEDFPLSRIETDKDEAIVLDLQRQGLTPHAIPAAGRQVLIQRNGNVAI
DCTDEVHPEVDHIVSLAARVVGLDIAGVDVVAQDISRPLHAQGGAIVEVNAGPGLLMHLKPAEGSPRPVGRAICDHLFPD
SPDHAQQDGLNSSPCGRIPIVGIAGSEGTQRVARLVAWLLHLSGRYTGLACRDGLFLDQRCVDASDSAHWEAGQRLLINR
TVQAAVFENGAETILRSGLAYDRCQVGVVTDLGGAAGLAEFDITEDEQMFRVMRSQVDVVLPGGAAVLNAAHERVVDMHD
LCDGEVIFYSTDPKAAAIARHCAQGGRALYVRQDQIVLATGTTEAFLPGLGKLSAWRARRDLNDSTLLAAVGAAWALGIP
LNLIGAGLEAFETTPKTAGSAE

Specific function: Catalyzes the ATP-dependent polymerization of arginine and aspartate to multi-L-arginyl-poly-L-aspartic acid (cyanophycin; a water-insoluble reserve polymer) [H]

COG id: COG1181

COG function: function code M; D-alanine-D-alanine ligase and related ATP-grasp enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-grasp domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011761
- InterPro:   IPR013651
- InterPro:   IPR013815
- InterPro:   IPR013816
- InterPro:   IPR011810
- InterPro:   IPR004101
- InterPro:   IPR013221 [H]

Pfam domain/function: PF02875 Mur_ligase_C; PF08245 Mur_ligase_M; PF08443 RimK [H]

EC number: =6.3.2.29; =6.3.2.30 [H]

Molecular weight: Translated: 79820; Mature: 79688

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKQDDIKLLRINYLRGPNIWTYRPVLEVWLDLGGLEDCPSHLLPGFNDRLVALLPALLE
CCCCCCEEEEEEEEECCCCCEEEHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHH
HHCGVGERGGFIQRLREGTWAGHVLEHVVIELLNLADMPTGFGQTRSTSKRGVYRMVFRA
HHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
RDEQVARTALAEGHRLLMAAINDEAFGPADVQVAVEKIRAKVDDCYLGPSTASIVAAATD
HHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHEECCCCHHHEEEEHHC
RRIPHIRLNDGNLVQLGYGASQRRIWTAETDLTSAIAEGIAHDKDLTKSLLATCGVPVPD
CCCCEEEECCCCEEEECCCCCCCEEEECHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC
GEIVSTAERAWEAAQDIGLPVVVKPSDGNHGRGVSLDLNTREEVEAAFRVAEPHGSEVMV
CHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCHHHH
ERFIRGHEHRLLVVGGRVVAAARGETATVTGDGHSTVMQLVDAQLNTDPRRGLEEDFPLS
HHHHCCCCCEEEEECCEEEEEECCCEEEEECCCHHHHHHHHHHHCCCCHHCCCCCCCCCC
RIETDKDEAIVLDLQRQGLTPHAIPAAGRQVLIQRNGNVAIDCTDEVHPEVDHIVSLAAR
CCCCCCCCEEEEEEHHCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCHHHHHHHHHH
VVGLDIAGVDVVAQDISRPLHAQGGAIVEVNAGPGLLMHLKPAEGSPRPVGRAICDHLFP
HHHCCCCCHHHHHHHHCCCHHCCCCEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHCC
DSPDHAQQDGLNSSPCGRIPIVGIAGSEGTQRVARLVAWLLHLSGRYTGLACRDGLFLDQ
CCCCHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEECCCCEEHH
RCVDASDSAHWEAGQRLLINRTVQAAVFENGAETILRSGLAYDRCQVGVVTDLGGAAGLA
HHCCCCCCCCHHHCCEEEEHHHHHHHHHHCHHHHHHHCCCCCCCEEEEEEECCCCCCCCE
EFDITEDEQMFRVMRSQVDVVLPGGAAVLNAAHERVVDMHDLCDGEVIFYSTDPKAAAIA
ECCCCCHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHH
RHCAQGGRALYVRQDQIVLATGTTEAFLPGLGKLSAWRARRDLNDSTLLAAVGAAWALGI
HHHHCCCCEEEEECCEEEEEECCCHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCC
PLNLIGAGLEAFETTPKTAGSAE
CHHHHHCCHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SKQDDIKLLRINYLRGPNIWTYRPVLEVWLDLGGLEDCPSHLLPGFNDRLVALLPALLE
CCCCCEEEEEEEEECCCCCEEEHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHH
HHCGVGERGGFIQRLREGTWAGHVLEHVVIELLNLADMPTGFGQTRSTSKRGVYRMVFRA
HHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHH
RDEQVARTALAEGHRLLMAAINDEAFGPADVQVAVEKIRAKVDDCYLGPSTASIVAAATD
HHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHEECCCCHHHEEEEHHC
RRIPHIRLNDGNLVQLGYGASQRRIWTAETDLTSAIAEGIAHDKDLTKSLLATCGVPVPD
CCCCEEEECCCCEEEECCCCCCCEEEECHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC
GEIVSTAERAWEAAQDIGLPVVVKPSDGNHGRGVSLDLNTREEVEAAFRVAEPHGSEVMV
CHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEECCCHHHHHHHHHCCCCCCCHHHH
ERFIRGHEHRLLVVGGRVVAAARGETATVTGDGHSTVMQLVDAQLNTDPRRGLEEDFPLS
HHHHCCCCCEEEEECCEEEEEECCCEEEEECCCHHHHHHHHHHHCCCCHHCCCCCCCCCC
RIETDKDEAIVLDLQRQGLTPHAIPAAGRQVLIQRNGNVAIDCTDEVHPEVDHIVSLAAR
CCCCCCCCEEEEEEHHCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCHHHHHHHHHH
VVGLDIAGVDVVAQDISRPLHAQGGAIVEVNAGPGLLMHLKPAEGSPRPVGRAICDHLFP
HHHCCCCCHHHHHHHHCCCHHCCCCEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHCC
DSPDHAQQDGLNSSPCGRIPIVGIAGSEGTQRVARLVAWLLHLSGRYTGLACRDGLFLDQ
CCCCHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEECCCCEEHH
RCVDASDSAHWEAGQRLLINRTVQAAVFENGAETILRSGLAYDRCQVGVVTDLGGAAGLA
HHCCCCCCCCHHHCCEEEEHHHHHHHHHHCHHHHHHHCCCCCCCEEEEEEECCCCCCCCE
EFDITEDEQMFRVMRSQVDVVLPGGAAVLNAAHERVVDMHDLCDGEVIFYSTDPKAAAIA
ECCCCCHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHH
RHCAQGGRALYVRQDQIVLATGTTEAFLPGLGKLSAWRARRDLNDSTLLAAVGAAWALGI
HHHHCCCCEEEEECCEEEEEECCCHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCC
PLNLIGAGLEAFETTPKTAGSAE
CHHHHHCCHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA