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The map label for this gene is yecS [H]

Identifier: 91787283

GI number: 91787283

Start: 1425239

End: 1425925

Strand: Reverse

Name: yecS [H]

Synonym: Bpro_1388

Alternate gene names: 91787283

Gene position: 1425925-1425239 (Counterclockwise)

Preceding gene: 91787284

Following gene: 91787282

Centisome position: 27.42

GC content: 59.83

Gene sequence:

>687_bases
ATGAACAGCATTCTTTCAGTGTTCTACCAATACTGGCCCGAGTGGGGTCCTCGCCTCGCCGAAGCGGCAAAGGTTACTGC
CAAGTTGTCATCCGCAGGCTTCGCGATTGCCTTGCTCCTGGGCGCGATCCTGGTCGCCATGATCCGCAGCGGCCGGCCAG
CCCTGCGCTTTGCAGCGAACTTCTTCATCCAGTTCGTACGCACCGTGCCCTTGCTCGCGCTGCTGCTGGCGCTCTACTTT
GCACTGCCGCCGCTCGGGATCACACTGCCGGGCTTTTGGGCTGGGATTATCGGGTTGGGTCTCCACGGCGCTGCTTACGT
TGCCGAGATTTTGCGCGGGGGCCTGCAGTCCATTCACCGCGGGCAGCGCGAAGCAGCCCTGGCTGTTGGCCTGGCGCCTC
ACCAGGTCTTTATGCATGTGGTGTTTCCCCAGGCTCTGCGCGTGATGCTTCCTCCGTTGCTAAACACCTATGTGGCGCTT
TTAAAAGACAGCTCACTCTGCGCACTGATTGCTACGGACGAGCTGATGCTCACGGCACGGGCCATGTCCAGCGAGTTCTT
CCTGCCCCTGCACATATTCCTGCTGGTGGGCGCCTTCTACTTTGCAATTGCTTTTCCCCTGTCAATGGTTTCGCGAGCGC
TTGAGAAGCACCTCTCGCGTGGCCGAAGGGTAATGGGTTCGACATGA

Upstream 100 bases:

>100_bases
CCACCTTGATCTACCTCGCTGCCATGCTTTTATATGCGGCCATGGTGCTGCCGATCAGCTGGGGATTTGCCAAGACCGAA
AGCCGCATGGAGAACAAGCG

Downstream 100 bases:

>100_bases
CCGATAAATCTCTTACTTACGCCTCCATAGAGGAGACCCTCGAAGCTTTGACCAGCGGAGCGATCAACAGCGAAGCATTG
GTCGAAAATCACTTGTCGCG

Product: amino acid ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MNSILSVFYQYWPEWGPRLAEAAKVTAKLSSAGFAIALLLGAILVAMIRSGRPALRFAANFFIQFVRTVPLLALLLALYF
ALPPLGITLPGFWAGIIGLGLHGAAYVAEILRGGLQSIHRGQREAALAVGLAPHQVFMHVVFPQALRVMLPPLLNTYVAL
LKDSSLCALIATDELMLTARAMSSEFFLPLHIFLLVGAFYFAIAFPLSMVSRALEKHLSRGRRVMGST

Sequences:

>Translated_228_residues
MNSILSVFYQYWPEWGPRLAEAAKVTAKLSSAGFAIALLLGAILVAMIRSGRPALRFAANFFIQFVRTVPLLALLLALYF
ALPPLGITLPGFWAGIIGLGLHGAAYVAEILRGGLQSIHRGQREAALAVGLAPHQVFMHVVFPQALRVMLPPLLNTYVAL
LKDSSLCALIATDELMLTARAMSSEFFLPLHIFLLVGAFYFAIAFPLSMVSRALEKHLSRGRRVMGST
>Mature_228_residues
MNSILSVFYQYWPEWGPRLAEAAKVTAKLSSAGFAIALLLGAILVAMIRSGRPALRFAANFFIQFVRTVPLLALLLALYF
ALPPLGITLPGFWAGIIGLGLHGAAYVAEILRGGLQSIHRGQREAALAVGLAPHQVFMHVVFPQALRVMLPPLLNTYVAL
LKDSSLCALIATDELMLTARAMSSEFFLPLHIFLLVGAFYFAIAFPLSMVSRALEKHLSRGRRVMGST

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=207, Percent_Identity=39.1304347826087, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI1787030, Length=211, Percent_Identity=36.0189573459716, Blast_Score=113, Evalue=1e-26,
Organism=Escherichia coli, GI87082239, Length=204, Percent_Identity=32.843137254902, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1786873, Length=216, Percent_Identity=28.7037037037037, Blast_Score=94, Evalue=6e-21,
Organism=Escherichia coli, GI1787087, Length=231, Percent_Identity=28.1385281385281, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI1786874, Length=212, Percent_Identity=27.8301886792453, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI48994930, Length=195, Percent_Identity=30.7692307692308, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI1788646, Length=214, Percent_Identity=25.7009345794392, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788645, Length=199, Percent_Identity=25.6281407035176, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24820; Mature: 24820

Theoretical pI: Translated: 10.75; Mature: 10.75

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSILSVFYQYWPEWGPRLAEAAKVTAKLSSAGFAIALLLGAILVAMIRSGRPALRFAAN
CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
FFIQFVRTVPLLALLLALYFALPPLGITLPGFWAGIIGLGLHGAAYVAEILRGGLQSIHR
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
GQREAALAVGLAPHQVFMHVVFPQALRVMLPPLLNTYVALLKDSSLCALIATDELMLTAR
CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHH
AMSSEFFLPLHIFLLVGAFYFAIAFPLSMVSRALEKHLSRGRRVMGST
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNSILSVFYQYWPEWGPRLAEAAKVTAKLSSAGFAIALLLGAILVAMIRSGRPALRFAAN
CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
FFIQFVRTVPLLALLLALYFALPPLGITLPGFWAGIIGLGLHGAAYVAEILRGGLQSIHR
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHC
GQREAALAVGLAPHQVFMHVVFPQALRVMLPPLLNTYVALLKDSSLCALIATDELMLTAR
CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHH
AMSSEFFLPLHIFLLVGAFYFAIAFPLSMVSRALEKHLSRGRRVMGST
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]