| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yneB [C]
Identifier: 91787183
GI number: 91787183
Start: 1328877
End: 1329689
Strand: Reverse
Name: yneB [C]
Synonym: Bpro_1287
Alternate gene names: 91787183
Gene position: 1329689-1328877 (Counterclockwise)
Preceding gene: 91787184
Following gene: 91787182
Centisome position: 25.57
GC content: 63.22
Gene sequence:
>813_bases ATGTTCGTCGGTAAACAAGTCCGCCTCAAACGCCTGCTCGGAAAATCCGGCCGCCTGCTGGCCATCACCATCGACCATCC GATCACCCGCGGGCTGATGCCCGGCCTGGAAGATATCCGCACCACCATGCGCAAGGTGGTGGCCGGCCGCCCCGACGCCA TCACCATGCACAAGGGAATCGCCGAAAAGGTGTTTGCACCCTATGCCGGTGAAGCCGCCATGATCATGAAAGCAAGCGCC TATTCAGTGCAGTACCACCCGACCTACGACGCCCCGGTGGCGGATATCGAAGAGGCGGTCCGACTGGGGGCTGACGCGAT CTCGGTGGGATGCATTGTCGGCGGGCCCGAGCAGGCCCAACAGCTGACTTTTCTTGGCAAAGTGTCCAAGGAGGCCAGCT CGGTGGGCATGCCCCTGGTGGCCCACATCTATCCCAAGGGGAGCATGATCAAGGACCCACACGACGCCAAGGCTGTGACC TATGCAGCGCGCGTTGGCGCCGAATTGGGCGTAGACATCATCAAGACCCTGTGGACCGGGTCGGCCGAGAGCTTTCGCAG CGTCGTCGAAGGCTGCCCCGCCATCGTGGCCCTGGCCGGTGGCGAAATGGGGGAAACCCTGGAAGACTACCTGCGCATGA CCCGTGAGGCACTCGACGTCGGCCTGGGCGGCGTGACCTACGGCCGTTTTGTCTGGCAGCATAAGCACCCCACGGCCGTG ATCCGTTCCCTCAGCGCCCTGATTCACGACAACGCCAGCGTGGCAGAAGCCCTCAAGGTCTATGACGCCGCAGTGACGAC GGAGGCCGAATGA
Upstream 100 bases:
>100_bases CATCGGTCCACTGCGCCTGTTTGGCATGTACTGACGCCGCACAACTCCACCCCATCCATCCACCCCCCATCCACTCACCC CATTCACAGGAGTATTCCCC
Downstream 100 bases:
>100_bases AAGCCGCCGTTCTGCGCGCCCCCAAGGTACTGCAACTCAGCGACATCGCCACACCGGAAGCCGCACCCGGCGAGCTGGTG CTGCGTGTGCGGGCTGCGAT
Product: fructose-bisphosphate aldolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MFVGKQVRLKRLLGKSGRLLAITIDHPITRGLMPGLEDIRTTMRKVVAGRPDAITMHKGIAEKVFAPYAGEAAMIMKASA YSVQYHPTYDAPVADIEEAVRLGADAISVGCIVGGPEQAQQLTFLGKVSKEASSVGMPLVAHIYPKGSMIKDPHDAKAVT YAARVGAELGVDIIKTLWTGSAESFRSVVEGCPAIVALAGGEMGETLEDYLRMTREALDVGLGGVTYGRFVWQHKHPTAV IRSLSALIHDNASVAEALKVYDAAVTTEAE
Sequences:
>Translated_270_residues MFVGKQVRLKRLLGKSGRLLAITIDHPITRGLMPGLEDIRTTMRKVVAGRPDAITMHKGIAEKVFAPYAGEAAMIMKASA YSVQYHPTYDAPVADIEEAVRLGADAISVGCIVGGPEQAQQLTFLGKVSKEASSVGMPLVAHIYPKGSMIKDPHDAKAVT YAARVGAELGVDIIKTLWTGSAESFRSVVEGCPAIVALAGGEMGETLEDYLRMTREALDVGLGGVTYGRFVWQHKHPTAV IRSLSALIHDNASVAEALKVYDAAVTTEAE >Mature_270_residues MFVGKQVRLKRLLGKSGRLLAITIDHPITRGLMPGLEDIRTTMRKVVAGRPDAITMHKGIAEKVFAPYAGEAAMIMKASA YSVQYHPTYDAPVADIEEAVRLGADAISVGCIVGGPEQAQQLTFLGKVSKEASSVGMPLVAHIYPKGSMIKDPHDAKAVT YAARVGAELGVDIIKTLWTGSAESFRSVVEGCPAIVALAGGEMGETLEDYLRMTREALDVGLGGVTYGRFVWQHKHPTAV IRSLSALIHDNASVAEALKVYDAAVTTEAE
Specific function: Unknown
COG id: COG1830
COG function: function code G; DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the deoC/fbaB aldolase family [H]
Homologues:
Organism=Escherichia coli, GI1787796, Length=259, Percent_Identity=27.7992277992278, Blast_Score=109, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR010210 - InterPro: IPR002915 [H]
Pfam domain/function: PF01791 DeoC [H]
EC number: 4.2.1.- [C]
Molecular weight: Translated: 28816; Mature: 28816
Theoretical pI: Translated: 7.27; Mature: 7.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFVGKQVRLKRLLGKSGRLLAITIDHPITRGLMPGLEDIRTTMRKVVAGRPDAITMHKGI CCCCHHHHHHHHHCCCCCEEEEEECCCHHHHCCCCHHHHHHHHHHHHCCCCCEEHHHHHH AEKVFAPYAGEAAMIMKASAYSVQYHPTYDAPVADIEEAVRLGADAISVGCIVGGPEQAQ HHHHHCCCCCCEEEEEEECCEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEECCHHHHH QLTFLGKVSKEASSVGMPLVAHIYPKGSMIKDPHDAKAVTYAARVGAELGVDIIKTLWTG HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC SAESFRSVVEGCPAIVALAGGEMGETLEDYLRMTREALDVGLGGVTYGRFVWQHKHPTAV CHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHEECCCHHHH IRSLSALIHDNASVAEALKVYDAAVTTEAE HHHHHHHHHCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MFVGKQVRLKRLLGKSGRLLAITIDHPITRGLMPGLEDIRTTMRKVVAGRPDAITMHKGI CCCCHHHHHHHHHCCCCCEEEEEECCCHHHHCCCCHHHHHHHHHHHHCCCCCEEHHHHHH AEKVFAPYAGEAAMIMKASAYSVQYHPTYDAPVADIEEAVRLGADAISVGCIVGGPEQAQ HHHHHCCCCCCEEEEEEECCEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEECCHHHHH QLTFLGKVSKEASSVGMPLVAHIYPKGSMIKDPHDAKAVTYAARVGAELGVDIIKTLWTG HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC SAESFRSVVEGCPAIVALAGGEMGETLEDYLRMTREALDVGLGGVTYGRFVWQHKHPTAV CHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHEECCCHHHH IRSLSALIHDNASVAEALKVYDAAVTTEAE HHHHHHHHHCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]