| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787170
Identifier: 91787170
GI number: 91787170
Start: 1316580
End: 1317047
Strand: Reverse
Name: 91787170
Synonym: Bpro_1273
Alternate gene names: NA
Gene position: 1317047-1316580 (Counterclockwise)
Preceding gene: 91787171
Following gene: 91787169
Centisome position: 25.33
GC content: 55.98
Gene sequence:
>468_bases ATGACAAGCATCACCAACATCGCTGAATCTGCGGCCACCCAGCCGCGCCGGGTCGACCAGTTGCTCACCCGCTATGGCGA GAGCCACCAGAATCCGCGCAACGAGGTGATCCACTTCATCGCCATTCCCTTGATCATGCTGAGCCTCGTCGGCATGCTGT TTGCGCTGCATCCTTACGTGGCTTATGCCTTCATTGCAGCCAGCATGGTGTATTACGTGCGGCTGTCGGTGGTGTTTCTC CTCACCATGGTGCTGTGGTCGCTGATAACCCTGGCGCTGGTGTTGGCCATGGGGCCGCAGGTGTTGCAGATTTCCATCGC CATCTTTGTCGGCGCCTGGGTCCTGCAATTCATCGGCCATAAAATAGAAGGGAAAAAACCCTCTTTTTTCGAGGATGTTC AATATCTCTGGGTTGGCCCGCTGTTTGTGCTGAGCAAGCTGTTTGGCAAGCTGGGACTGCACTGGTAG
Upstream 100 bases:
>100_bases CATCGGACGGCAAACACCTGAGCCCGGTGTGCCTTCAGCGACTTGCATAAACGGGTGCATGGTTTAAAGTCTGAAAACAC GTGCCAACCGGAGCGCCTTG
Downstream 100 bases:
>100_bases AGCGCGCTGAAACACCACAAAACCACCAGCAAGGCCTTGGGCACTGCCGGAAAATGCCGGGAAGTGCCGGGAAATTCCGT AAACCGCCCGGTGTGACTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MTSITNIAESAATQPRRVDQLLTRYGESHQNPRNEVIHFIAIPLIMLSLVGMLFALHPYVAYAFIAASMVYYVRLSVVFL LTMVLWSLITLALVLAMGPQVLQISIAIFVGAWVLQFIGHKIEGKKPSFFEDVQYLWVGPLFVLSKLFGKLGLHW
Sequences:
>Translated_155_residues MTSITNIAESAATQPRRVDQLLTRYGESHQNPRNEVIHFIAIPLIMLSLVGMLFALHPYVAYAFIAASMVYYVRLSVVFL LTMVLWSLITLALVLAMGPQVLQISIAIFVGAWVLQFIGHKIEGKKPSFFEDVQYLWVGPLFVLSKLFGKLGLHW >Mature_154_residues TSITNIAESAATQPRRVDQLLTRYGESHQNPRNEVIHFIAIPLIMLSLVGMLFALHPYVAYAFIAASMVYYVRLSVVFLL TMVLWSLITLALVLAMGPQVLQISIAIFVGAWVLQFIGHKIEGKKPSFFEDVQYLWVGPLFVLSKLFGKLGLHW
Specific function: Unknown
COG id: COG4539
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17478; Mature: 17347
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSITNIAESAATQPRRVDQLLTRYGESHQNPRNEVIHFIAIPLIMLSLVGMLFALHPYV CCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYAFIAASMVYYVRLSVVFLLTMVLWSLITLALVLAMGPQVLQISIAIFVGAWVLQFIGH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH KIEGKKPSFFEDVQYLWVGPLFVLSKLFGKLGLHW HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TSITNIAESAATQPRRVDQLLTRYGESHQNPRNEVIHFIAIPLIMLSLVGMLFALHPYV CCHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AYAFIAASMVYYVRLSVVFLLTMVLWSLITLALVLAMGPQVLQISIAIFVGAWVLQFIGH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH KIEGKKPSFFEDVQYLWVGPLFVLSKLFGKLGLHW HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA