| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is 91787021
Identifier: 91787021
GI number: 91787021
Start: 1160536
End: 1162377
Strand: Reverse
Name: 91787021
Synonym: Bpro_1123
Alternate gene names: NA
Gene position: 1162377-1160536 (Counterclockwise)
Preceding gene: 91787022
Following gene: 91787020
Centisome position: 22.35
GC content: 63.46
Gene sequence:
>1842_bases TTGCCCAACACGCCAAGCCTCCACATGAAAAACAAAATACGACCCGCCACCTCCATTCACTACCGCGTGGAGGTGGCCGA TCCCAATGCACACCTCTTTCGCGTGACACTCACCATCCCGCTGCCAGCCGCCGAGCAGCGGGTGGCCCTGCCGGTGTGGA TTCCAGGCAGCTACCTGGTGCGGGAGTTCTCAAAAAACCTTCAATGCCTGGGGGCGCGACAGGGAAGCCGCAAGCCTGTC CCGGTGGAGCAACTGGACAAATGCACCTGGCAGATCCGCTGCGACCCGACCACACCACTGGTGCTGACCTATGAAGTCCA TGCCCGCGACAGCTCGGTACGCACCGCCTGGCTGGATGCCGACCGCGGTTTTTTCAATGGCACCAGCCTGTGCCTGAAAG CAGAAGGACAAGAGAACGTGCCGCATGTGCTGGAACTGCCGGCGCCCAAGGCGCTGGCCCACTGGACAGTGGCCACTGGT TTGACCGCACAAAAGGTCAACAAGCGCGGCTTTGGCACGTATGTGGCGGCCGATTACGACGAACTGGTCGATTGCCCGGT CGAGATGGGCACGTTCTGGAGCGGTACCTTCAGCGCCTGCGGCGTGCCGCACCGCTTTGTGGTGGCCGGTGCCGCCGCCA CGCTGGACGGTGACCGGCTGCTGGCCGATACCCAAAAAATCTGCGAAGCCGAAATCCGTTTCTGGCACGGCAGCAAAAAA CCCCTCTATAAAAACTACCTGTTCATGCTCAACGCAGTGGACGACGGTTATGGCGGACTGGAGCACCGCAACTCCACGGC CCTGATCTGCAACCGCAAGGACCTGCCGCGGCTGGGCGAACCCAAACCATCCGAGGGTTACACCACGCTGCGCGGCCTCA TCAGCCACGAGTATTTCCATACCTGGAACGTCAAGCGCCTGCGCCCAGGAGAATTCGACAGCTACCACTACGACCGCGAG AACTACACCGGACTGCTGTGGTTCTTTGAAGGCTTCACCAGCTATTACGATGACCTCCTGTTACGCCGGGCGGGCCTGCT GGACAACGCGGCCTACCTGAAGCTGCTGAACAAAACCATCAACCAGGTGATGCAGACACCGGGCCGGCTGGTGCAGTCGG TGGCCCAGGCCAGCTTTGACGCCTGGGTGAAGTACTACCGGCCGGATGAAAACACGCCCAACGCCACGGTGAGCTACTAC ACCAAGGGCGCGCTGGTGGCCCTGTGTTTTGACCTGACCTTGCGCAGCGAGAGCCGGCCAACACAAGGCGCCAGCGCTGG CGCGACGCTGGACGATGTGATGCGCGCGCTCTGGCAGCGCTGCAAGGCGGGGCCCATGCGCGAGGCTGATTTCGAGCAGG CCCTACTGACCCTGGGTCACCGCTCCTATGCGCCCGAACTGGCACGCTGGGTGCATGGCCGGGCCGAGCTTCCCCTGAAA GAACTGCTGCAACAGCACGGCGTGGCCGTATTCGAAGAGCCTGCCCAGCTGGCGCAGCGGCTGGGCCTGCGTGTCGGCGA AAGTCAGGGTGTGCAAATCAAGGCCGTGCTGCGCGGCGGGGTTGCCGAGCAGGCTGGTTTCGCGGCTGGCGATGAATGGC TGGGACTGGAGCCTGCGGGCAGCGCACGGACACGCCATGCCGGCCAACCGGACGGCTGGCGCATGAGCCGGCTGGACGAC CTGCTGCTCTACGCGGGGACGGCCAAAAAAGTCGTTGCGCTGGTATCGCGCGACAAGCGGCTGATGCGGCTGGATCTAGC CATGCCGCCCGCACTCACAACCTGGCGGCTGGCGGTCCAGGATGCCGGATTGGTCGACCAGTGGCTGGCACCCAACCCCT GA
Upstream 100 bases:
>100_bases AAGCTGGCTGCGGGTGGCTGACTGCCACGCGGTGCCCTCAAGGTGTCCGCTTTGAAGCCGCACAGTTCTTTGCCTTCAAT CATCAGGGTGGAGTATTCTT
Downstream 100 bases:
>100_bases ACGCCTGGCGCTGTGGACGCAGGTTGGCGAGGCGCCATGTCGAGGGAGCGCGTGTCCCGCCCGCACCGCTGTCGGGAAGC TCGCATGACGCCGAAAACCG
Product: peptidase M61
Products: NA
Alternate protein names: Peptidase M; Protease; M61 Family Peptidase; Pdz/Dhr/Glgf; M61 Glycyl Aminopeptidase; M61 Family Glycyl Aminopeptidase; Aminopeptidase N Family Protein; Metallopeptidase; PDZ Domain-Containing Protein; Trypsin-Like Serine Protease; Protease With C-Terminal PDZ Domain-Containing Protein; PDZ/DHR/GLGFPeptidase M; PDZ Domain Protein; Signaling Protein; M61 Glycyl Aminopeptidase Protein; M61 Glycyl Aminopeptidase Family Protein
Number of amino acids: Translated: 613; Mature: 612
Protein sequence:
>613_residues MPNTPSLHMKNKIRPATSIHYRVEVADPNAHLFRVTLTIPLPAAEQRVALPVWIPGSYLVREFSKNLQCLGARQGSRKPV PVEQLDKCTWQIRCDPTTPLVLTYEVHARDSSVRTAWLDADRGFFNGTSLCLKAEGQENVPHVLELPAPKALAHWTVATG LTAQKVNKRGFGTYVAADYDELVDCPVEMGTFWSGTFSACGVPHRFVVAGAAATLDGDRLLADTQKICEAEIRFWHGSKK PLYKNYLFMLNAVDDGYGGLEHRNSTALICNRKDLPRLGEPKPSEGYTTLRGLISHEYFHTWNVKRLRPGEFDSYHYDRE NYTGLLWFFEGFTSYYDDLLLRRAGLLDNAAYLKLLNKTINQVMQTPGRLVQSVAQASFDAWVKYYRPDENTPNATVSYY TKGALVALCFDLTLRSESRPTQGASAGATLDDVMRALWQRCKAGPMREADFEQALLTLGHRSYAPELARWVHGRAELPLK ELLQQHGVAVFEEPAQLAQRLGLRVGESQGVQIKAVLRGGVAEQAGFAAGDEWLGLEPAGSARTRHAGQPDGWRMSRLDD LLLYAGTAKKVVALVSRDKRLMRLDLAMPPALTTWRLAVQDAGLVDQWLAPNP
Sequences:
>Translated_613_residues MPNTPSLHMKNKIRPATSIHYRVEVADPNAHLFRVTLTIPLPAAEQRVALPVWIPGSYLVREFSKNLQCLGARQGSRKPV PVEQLDKCTWQIRCDPTTPLVLTYEVHARDSSVRTAWLDADRGFFNGTSLCLKAEGQENVPHVLELPAPKALAHWTVATG LTAQKVNKRGFGTYVAADYDELVDCPVEMGTFWSGTFSACGVPHRFVVAGAAATLDGDRLLADTQKICEAEIRFWHGSKK PLYKNYLFMLNAVDDGYGGLEHRNSTALICNRKDLPRLGEPKPSEGYTTLRGLISHEYFHTWNVKRLRPGEFDSYHYDRE NYTGLLWFFEGFTSYYDDLLLRRAGLLDNAAYLKLLNKTINQVMQTPGRLVQSVAQASFDAWVKYYRPDENTPNATVSYY TKGALVALCFDLTLRSESRPTQGASAGATLDDVMRALWQRCKAGPMREADFEQALLTLGHRSYAPELARWVHGRAELPLK ELLQQHGVAVFEEPAQLAQRLGLRVGESQGVQIKAVLRGGVAEQAGFAAGDEWLGLEPAGSARTRHAGQPDGWRMSRLDD LLLYAGTAKKVVALVSRDKRLMRLDLAMPPALTTWRLAVQDAGLVDQWLAPNP >Mature_612_residues PNTPSLHMKNKIRPATSIHYRVEVADPNAHLFRVTLTIPLPAAEQRVALPVWIPGSYLVREFSKNLQCLGARQGSRKPVP VEQLDKCTWQIRCDPTTPLVLTYEVHARDSSVRTAWLDADRGFFNGTSLCLKAEGQENVPHVLELPAPKALAHWTVATGL TAQKVNKRGFGTYVAADYDELVDCPVEMGTFWSGTFSACGVPHRFVVAGAAATLDGDRLLADTQKICEAEIRFWHGSKKP LYKNYLFMLNAVDDGYGGLEHRNSTALICNRKDLPRLGEPKPSEGYTTLRGLISHEYFHTWNVKRLRPGEFDSYHYDREN YTGLLWFFEGFTSYYDDLLLRRAGLLDNAAYLKLLNKTINQVMQTPGRLVQSVAQASFDAWVKYYRPDENTPNATVSYYT KGALVALCFDLTLRSESRPTQGASAGATLDDVMRALWQRCKAGPMREADFEQALLTLGHRSYAPELARWVHGRAELPLKE LLQQHGVAVFEEPAQLAQRLGLRVGESQGVQIKAVLRGGVAEQAGFAAGDEWLGLEPAGSARTRHAGQPDGWRMSRLDDL LLYAGTAKKVVALVSRDKRLMRLDLAMPPALTTWRLAVQDAGLVDQWLAPNP
Specific function: Unknown
COG id: COG3975
COG function: function code R; Predicted protease with the C-terminal PDZ domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68388; Mature: 68257
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNTPSLHMKNKIRPATSIHYRVEVADPNAHLFRVTLTIPLPAAEQRVALPVWIPGSYLV CCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEEEECCCCCCCEEEEEECCHHHHH REFSKNLQCLGARQGSRKPVPVEQLDKCTWQIRCDPTTPLVLTYEVHARDSSVRTAWLDA HHHHCCCEEEECCCCCCCCCCHHHHCCCEEEEEECCCCCEEEEEEEECCCCCCEEEEEEC DRGFFNGTSLCLKAEGQENVPHVLELPAPKALAHWTVATGLTAQKVNKRGFGTYVAADYD CCCCCCCCEEEEECCCCCCCCCEEECCCCHHHHHHHHHCCCHHHHHCCCCCCEEEECCHH ELVDCPVEMGTFWSGTFSACGVPHRFVVAGAAATLDGDRLLADTQKICEAEIRFWHGSKK HHHCCCHHCCCCCCCCHHHCCCCCEEEEECCCEECCCCHHHHHHHHHHHHHHHEECCCCC PLYKNYLFMLNAVDDGYGGLEHRNSTALICNRKDLPRLGEPKPSEGYTTLRGLISHEYFH CHHHCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHE TWNVKRLRPGEFDSYHYDRENYTGLLWFFEGFTSYYDDLLLRRAGLLDNAAYLKLLNKTI ECCCCCCCCCCCCCEECCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH NQVMQTPGRLVQSVAQASFDAWVKYYRPDENTPNATVSYYTKGALVALCFDLTLRSESRP HHHHHCHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEECCCEEEHHHHHHCCCCCCC TQGASAGATLDDVMRALWQRCKAGPMREADFEQALLTLGHRSYAPELARWVHGRAELPLK CCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHH ELLQQHGVAVFEEPAQLAQRLGLRVGESQGVQIKAVLRGGVAEQAGFAAGDEWLGLEPAG HHHHHCCCEEEHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHCCCCCCCCCCCCCCCC SARTRHAGQPDGWRMSRLDDLLLYAGTAKKVVALVSRDKRLMRLDLAMPPALTTWRLAVQ CCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEC DAGLVDQWLAPNP CCCCHHHCCCCCC >Mature Secondary Structure PNTPSLHMKNKIRPATSIHYRVEVADPNAHLFRVTLTIPLPAAEQRVALPVWIPGSYLV CCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEEEECCCCCCCEEEEEECCHHHHH REFSKNLQCLGARQGSRKPVPVEQLDKCTWQIRCDPTTPLVLTYEVHARDSSVRTAWLDA HHHHCCCEEEECCCCCCCCCCHHHHCCCEEEEEECCCCCEEEEEEEECCCCCCEEEEEEC DRGFFNGTSLCLKAEGQENVPHVLELPAPKALAHWTVATGLTAQKVNKRGFGTYVAADYD CCCCCCCCEEEEECCCCCCCCCEEECCCCHHHHHHHHHCCCHHHHHCCCCCCEEEECCHH ELVDCPVEMGTFWSGTFSACGVPHRFVVAGAAATLDGDRLLADTQKICEAEIRFWHGSKK HHHCCCHHCCCCCCCCHHHCCCCCEEEEECCCEECCCCHHHHHHHHHHHHHHHEECCCCC PLYKNYLFMLNAVDDGYGGLEHRNSTALICNRKDLPRLGEPKPSEGYTTLRGLISHEYFH CHHHCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHE TWNVKRLRPGEFDSYHYDRENYTGLLWFFEGFTSYYDDLLLRRAGLLDNAAYLKLLNKTI ECCCCCCCCCCCCCEECCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH NQVMQTPGRLVQSVAQASFDAWVKYYRPDENTPNATVSYYTKGALVALCFDLTLRSESRP HHHHHCHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEECCCEEEHHHHHHCCCCCCC TQGASAGATLDDVMRALWQRCKAGPMREADFEQALLTLGHRSYAPELARWVHGRAELPLK CCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHH ELLQQHGVAVFEEPAQLAQRLGLRVGESQGVQIKAVLRGGVAEQAGFAAGDEWLGLEPAG HHHHHCCCEEEHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHCCCCCCCCCCCCCCCC SARTRHAGQPDGWRMSRLDDLLLYAGTAKKVVALVSRDKRLMRLDLAMPPALTTWRLAVQ CCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEC DAGLVDQWLAPNP CCCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA