Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91787021

Identifier: 91787021

GI number: 91787021

Start: 1160536

End: 1162377

Strand: Reverse

Name: 91787021

Synonym: Bpro_1123

Alternate gene names: NA

Gene position: 1162377-1160536 (Counterclockwise)

Preceding gene: 91787022

Following gene: 91787020

Centisome position: 22.35

GC content: 63.46

Gene sequence:

>1842_bases
TTGCCCAACACGCCAAGCCTCCACATGAAAAACAAAATACGACCCGCCACCTCCATTCACTACCGCGTGGAGGTGGCCGA
TCCCAATGCACACCTCTTTCGCGTGACACTCACCATCCCGCTGCCAGCCGCCGAGCAGCGGGTGGCCCTGCCGGTGTGGA
TTCCAGGCAGCTACCTGGTGCGGGAGTTCTCAAAAAACCTTCAATGCCTGGGGGCGCGACAGGGAAGCCGCAAGCCTGTC
CCGGTGGAGCAACTGGACAAATGCACCTGGCAGATCCGCTGCGACCCGACCACACCACTGGTGCTGACCTATGAAGTCCA
TGCCCGCGACAGCTCGGTACGCACCGCCTGGCTGGATGCCGACCGCGGTTTTTTCAATGGCACCAGCCTGTGCCTGAAAG
CAGAAGGACAAGAGAACGTGCCGCATGTGCTGGAACTGCCGGCGCCCAAGGCGCTGGCCCACTGGACAGTGGCCACTGGT
TTGACCGCACAAAAGGTCAACAAGCGCGGCTTTGGCACGTATGTGGCGGCCGATTACGACGAACTGGTCGATTGCCCGGT
CGAGATGGGCACGTTCTGGAGCGGTACCTTCAGCGCCTGCGGCGTGCCGCACCGCTTTGTGGTGGCCGGTGCCGCCGCCA
CGCTGGACGGTGACCGGCTGCTGGCCGATACCCAAAAAATCTGCGAAGCCGAAATCCGTTTCTGGCACGGCAGCAAAAAA
CCCCTCTATAAAAACTACCTGTTCATGCTCAACGCAGTGGACGACGGTTATGGCGGACTGGAGCACCGCAACTCCACGGC
CCTGATCTGCAACCGCAAGGACCTGCCGCGGCTGGGCGAACCCAAACCATCCGAGGGTTACACCACGCTGCGCGGCCTCA
TCAGCCACGAGTATTTCCATACCTGGAACGTCAAGCGCCTGCGCCCAGGAGAATTCGACAGCTACCACTACGACCGCGAG
AACTACACCGGACTGCTGTGGTTCTTTGAAGGCTTCACCAGCTATTACGATGACCTCCTGTTACGCCGGGCGGGCCTGCT
GGACAACGCGGCCTACCTGAAGCTGCTGAACAAAACCATCAACCAGGTGATGCAGACACCGGGCCGGCTGGTGCAGTCGG
TGGCCCAGGCCAGCTTTGACGCCTGGGTGAAGTACTACCGGCCGGATGAAAACACGCCCAACGCCACGGTGAGCTACTAC
ACCAAGGGCGCGCTGGTGGCCCTGTGTTTTGACCTGACCTTGCGCAGCGAGAGCCGGCCAACACAAGGCGCCAGCGCTGG
CGCGACGCTGGACGATGTGATGCGCGCGCTCTGGCAGCGCTGCAAGGCGGGGCCCATGCGCGAGGCTGATTTCGAGCAGG
CCCTACTGACCCTGGGTCACCGCTCCTATGCGCCCGAACTGGCACGCTGGGTGCATGGCCGGGCCGAGCTTCCCCTGAAA
GAACTGCTGCAACAGCACGGCGTGGCCGTATTCGAAGAGCCTGCCCAGCTGGCGCAGCGGCTGGGCCTGCGTGTCGGCGA
AAGTCAGGGTGTGCAAATCAAGGCCGTGCTGCGCGGCGGGGTTGCCGAGCAGGCTGGTTTCGCGGCTGGCGATGAATGGC
TGGGACTGGAGCCTGCGGGCAGCGCACGGACACGCCATGCCGGCCAACCGGACGGCTGGCGCATGAGCCGGCTGGACGAC
CTGCTGCTCTACGCGGGGACGGCCAAAAAAGTCGTTGCGCTGGTATCGCGCGACAAGCGGCTGATGCGGCTGGATCTAGC
CATGCCGCCCGCACTCACAACCTGGCGGCTGGCGGTCCAGGATGCCGGATTGGTCGACCAGTGGCTGGCACCCAACCCCT
GA

Upstream 100 bases:

>100_bases
AAGCTGGCTGCGGGTGGCTGACTGCCACGCGGTGCCCTCAAGGTGTCCGCTTTGAAGCCGCACAGTTCTTTGCCTTCAAT
CATCAGGGTGGAGTATTCTT

Downstream 100 bases:

>100_bases
ACGCCTGGCGCTGTGGACGCAGGTTGGCGAGGCGCCATGTCGAGGGAGCGCGTGTCCCGCCCGCACCGCTGTCGGGAAGC
TCGCATGACGCCGAAAACCG

Product: peptidase M61

Products: NA

Alternate protein names: Peptidase M; Protease; M61 Family Peptidase; Pdz/Dhr/Glgf; M61 Glycyl Aminopeptidase; M61 Family Glycyl Aminopeptidase; Aminopeptidase N Family Protein; Metallopeptidase; PDZ Domain-Containing Protein; Trypsin-Like Serine Protease; Protease With C-Terminal PDZ Domain-Containing Protein; PDZ/DHR/GLGFPeptidase M; PDZ Domain Protein; Signaling Protein; M61 Glycyl Aminopeptidase Protein; M61 Glycyl Aminopeptidase Family Protein

Number of amino acids: Translated: 613; Mature: 612

Protein sequence:

>613_residues
MPNTPSLHMKNKIRPATSIHYRVEVADPNAHLFRVTLTIPLPAAEQRVALPVWIPGSYLVREFSKNLQCLGARQGSRKPV
PVEQLDKCTWQIRCDPTTPLVLTYEVHARDSSVRTAWLDADRGFFNGTSLCLKAEGQENVPHVLELPAPKALAHWTVATG
LTAQKVNKRGFGTYVAADYDELVDCPVEMGTFWSGTFSACGVPHRFVVAGAAATLDGDRLLADTQKICEAEIRFWHGSKK
PLYKNYLFMLNAVDDGYGGLEHRNSTALICNRKDLPRLGEPKPSEGYTTLRGLISHEYFHTWNVKRLRPGEFDSYHYDRE
NYTGLLWFFEGFTSYYDDLLLRRAGLLDNAAYLKLLNKTINQVMQTPGRLVQSVAQASFDAWVKYYRPDENTPNATVSYY
TKGALVALCFDLTLRSESRPTQGASAGATLDDVMRALWQRCKAGPMREADFEQALLTLGHRSYAPELARWVHGRAELPLK
ELLQQHGVAVFEEPAQLAQRLGLRVGESQGVQIKAVLRGGVAEQAGFAAGDEWLGLEPAGSARTRHAGQPDGWRMSRLDD
LLLYAGTAKKVVALVSRDKRLMRLDLAMPPALTTWRLAVQDAGLVDQWLAPNP

Sequences:

>Translated_613_residues
MPNTPSLHMKNKIRPATSIHYRVEVADPNAHLFRVTLTIPLPAAEQRVALPVWIPGSYLVREFSKNLQCLGARQGSRKPV
PVEQLDKCTWQIRCDPTTPLVLTYEVHARDSSVRTAWLDADRGFFNGTSLCLKAEGQENVPHVLELPAPKALAHWTVATG
LTAQKVNKRGFGTYVAADYDELVDCPVEMGTFWSGTFSACGVPHRFVVAGAAATLDGDRLLADTQKICEAEIRFWHGSKK
PLYKNYLFMLNAVDDGYGGLEHRNSTALICNRKDLPRLGEPKPSEGYTTLRGLISHEYFHTWNVKRLRPGEFDSYHYDRE
NYTGLLWFFEGFTSYYDDLLLRRAGLLDNAAYLKLLNKTINQVMQTPGRLVQSVAQASFDAWVKYYRPDENTPNATVSYY
TKGALVALCFDLTLRSESRPTQGASAGATLDDVMRALWQRCKAGPMREADFEQALLTLGHRSYAPELARWVHGRAELPLK
ELLQQHGVAVFEEPAQLAQRLGLRVGESQGVQIKAVLRGGVAEQAGFAAGDEWLGLEPAGSARTRHAGQPDGWRMSRLDD
LLLYAGTAKKVVALVSRDKRLMRLDLAMPPALTTWRLAVQDAGLVDQWLAPNP
>Mature_612_residues
PNTPSLHMKNKIRPATSIHYRVEVADPNAHLFRVTLTIPLPAAEQRVALPVWIPGSYLVREFSKNLQCLGARQGSRKPVP
VEQLDKCTWQIRCDPTTPLVLTYEVHARDSSVRTAWLDADRGFFNGTSLCLKAEGQENVPHVLELPAPKALAHWTVATGL
TAQKVNKRGFGTYVAADYDELVDCPVEMGTFWSGTFSACGVPHRFVVAGAAATLDGDRLLADTQKICEAEIRFWHGSKKP
LYKNYLFMLNAVDDGYGGLEHRNSTALICNRKDLPRLGEPKPSEGYTTLRGLISHEYFHTWNVKRLRPGEFDSYHYDREN
YTGLLWFFEGFTSYYDDLLLRRAGLLDNAAYLKLLNKTINQVMQTPGRLVQSVAQASFDAWVKYYRPDENTPNATVSYYT
KGALVALCFDLTLRSESRPTQGASAGATLDDVMRALWQRCKAGPMREADFEQALLTLGHRSYAPELARWVHGRAELPLKE
LLQQHGVAVFEEPAQLAQRLGLRVGESQGVQIKAVLRGGVAEQAGFAAGDEWLGLEPAGSARTRHAGQPDGWRMSRLDDL
LLYAGTAKKVVALVSRDKRLMRLDLAMPPALTTWRLAVQDAGLVDQWLAPNP

Specific function: Unknown

COG id: COG3975

COG function: function code R; Predicted protease with the C-terminal PDZ domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68388; Mature: 68257

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNTPSLHMKNKIRPATSIHYRVEVADPNAHLFRVTLTIPLPAAEQRVALPVWIPGSYLV
CCCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEEEECCCCCCCEEEEEECCHHHHH
REFSKNLQCLGARQGSRKPVPVEQLDKCTWQIRCDPTTPLVLTYEVHARDSSVRTAWLDA
HHHHCCCEEEECCCCCCCCCCHHHHCCCEEEEEECCCCCEEEEEEEECCCCCCEEEEEEC
DRGFFNGTSLCLKAEGQENVPHVLELPAPKALAHWTVATGLTAQKVNKRGFGTYVAADYD
CCCCCCCCEEEEECCCCCCCCCEEECCCCHHHHHHHHHCCCHHHHHCCCCCCEEEECCHH
ELVDCPVEMGTFWSGTFSACGVPHRFVVAGAAATLDGDRLLADTQKICEAEIRFWHGSKK
HHHCCCHHCCCCCCCCHHHCCCCCEEEEECCCEECCCCHHHHHHHHHHHHHHHEECCCCC
PLYKNYLFMLNAVDDGYGGLEHRNSTALICNRKDLPRLGEPKPSEGYTTLRGLISHEYFH
CHHHCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHE
TWNVKRLRPGEFDSYHYDRENYTGLLWFFEGFTSYYDDLLLRRAGLLDNAAYLKLLNKTI
ECCCCCCCCCCCCCEECCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
NQVMQTPGRLVQSVAQASFDAWVKYYRPDENTPNATVSYYTKGALVALCFDLTLRSESRP
HHHHHCHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEECCCEEEHHHHHHCCCCCCC
TQGASAGATLDDVMRALWQRCKAGPMREADFEQALLTLGHRSYAPELARWVHGRAELPLK
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHH
ELLQQHGVAVFEEPAQLAQRLGLRVGESQGVQIKAVLRGGVAEQAGFAAGDEWLGLEPAG
HHHHHCCCEEEHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHCCCCCCCCCCCCCCCC
SARTRHAGQPDGWRMSRLDDLLLYAGTAKKVVALVSRDKRLMRLDLAMPPALTTWRLAVQ
CCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEC
DAGLVDQWLAPNP
CCCCHHHCCCCCC
>Mature Secondary Structure 
PNTPSLHMKNKIRPATSIHYRVEVADPNAHLFRVTLTIPLPAAEQRVALPVWIPGSYLV
CCCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEEEECCCCCCCEEEEEECCHHHHH
REFSKNLQCLGARQGSRKPVPVEQLDKCTWQIRCDPTTPLVLTYEVHARDSSVRTAWLDA
HHHHCCCEEEECCCCCCCCCCHHHHCCCEEEEEECCCCCEEEEEEEECCCCCCEEEEEEC
DRGFFNGTSLCLKAEGQENVPHVLELPAPKALAHWTVATGLTAQKVNKRGFGTYVAADYD
CCCCCCCCEEEEECCCCCCCCCEEECCCCHHHHHHHHHCCCHHHHHCCCCCCEEEECCHH
ELVDCPVEMGTFWSGTFSACGVPHRFVVAGAAATLDGDRLLADTQKICEAEIRFWHGSKK
HHHCCCHHCCCCCCCCHHHCCCCCEEEEECCCEECCCCHHHHHHHHHHHHHHHEECCCCC
PLYKNYLFMLNAVDDGYGGLEHRNSTALICNRKDLPRLGEPKPSEGYTTLRGLISHEYFH
CHHHCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHE
TWNVKRLRPGEFDSYHYDRENYTGLLWFFEGFTSYYDDLLLRRAGLLDNAAYLKLLNKTI
ECCCCCCCCCCCCCEECCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
NQVMQTPGRLVQSVAQASFDAWVKYYRPDENTPNATVSYYTKGALVALCFDLTLRSESRP
HHHHHCHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEECCCEEEHHHHHHCCCCCCC
TQGASAGATLDDVMRALWQRCKAGPMREADFEQALLTLGHRSYAPELARWVHGRAELPLK
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCHH
ELLQQHGVAVFEEPAQLAQRLGLRVGESQGVQIKAVLRGGVAEQAGFAAGDEWLGLEPAG
HHHHHCCCEEEHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHCCCCCCCCCCCCCCCC
SARTRHAGQPDGWRMSRLDDLLLYAGTAKKVVALVSRDKRLMRLDLAMPPALTTWRLAVQ
CCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEC
DAGLVDQWLAPNP
CCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA