| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is yqiA [H]
Identifier: 91786988
GI number: 91786988
Start: 1123374
End: 1123973
Strand: Reverse
Name: yqiA [H]
Synonym: Bpro_1090
Alternate gene names: 91786988
Gene position: 1123973-1123374 (Counterclockwise)
Preceding gene: 91786994
Following gene: 91786987
Centisome position: 21.61
GC content: 65.17
Gene sequence:
>600_bases ATGCCCACCACCCACCTGCTCTACCTGCACGGCTTTCGCTCCTCGCCCCAGTCCGTCAAGGCGAAAAAAATGGCCGCCAT CGTGCGGCTGCGCCATCCGTCCGTGCGGTGGTGGTGCCCGCAACTACCACCCTCCCCGCGCGAGGCCCTGCAGGCAATCA TGGACGGCATTGCCGGCTGGCCCCGGGAAGCCGGCTTTGAGAGCCTGGCCGTGGTCGGCTCCTCACTCGGCGGTTTTTAC GCCACCGCAGTGGCCGAACGGACCGGCTGCAGGGCGGTGCTGCTTAACCCCGCGGTGGAGCCGGCACGCGACCTGAGCGG CTATATAGGTGAGCAAACCGCCTGGCACAACGCTGGAGAGCACTTTTTCTTTGAACCCCGCTTTGTCGACGAGTTGCGCG CGCTGCAGGCCGGCCCGCTGAAAACGCCTGAAAACTACCTGGCCGTGATCGCCAAAGGCGACGAAGTGCTGGACTGGCGC GAAATGACCGCCCGCTATGCCGGTGCGCAGATACGGCTGCTCGAAGGCGGTGACCATGCCCTGAGCGATTTCGACCTGCA CCTGCCGGCGATTCTGGATTTTCTGGACCTGGCCCCCTGA
Upstream 100 bases:
>100_bases CGTTTTTCCAGCAATTCAGTTATCACCACCTCGGCCACCCAATATCCACGCGCAAGCCCCCGCACCGGCCCGCTGCGGCT CAGCCACGTACCATGTCGCC
Downstream 100 bases:
>100_bases ACCCCGCCACACTGCCCAAAAGCCCGCCTGATTACACTAGCGGCAAGCATGTAACGGCCAACCAAGGCCTCAAAGGATTT CGTTTTGTTTGTATTGTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MPTTHLLYLHGFRSSPQSVKAKKMAAIVRLRHPSVRWWCPQLPPSPREALQAIMDGIAGWPREAGFESLAVVGSSLGGFY ATAVAERTGCRAVLLNPAVEPARDLSGYIGEQTAWHNAGEHFFFEPRFVDELRALQAGPLKTPENYLAVIAKGDEVLDWR EMTARYAGAQIRLLEGGDHALSDFDLHLPAILDFLDLAP
Sequences:
>Translated_199_residues MPTTHLLYLHGFRSSPQSVKAKKMAAIVRLRHPSVRWWCPQLPPSPREALQAIMDGIAGWPREAGFESLAVVGSSLGGFY ATAVAERTGCRAVLLNPAVEPARDLSGYIGEQTAWHNAGEHFFFEPRFVDELRALQAGPLKTPENYLAVIAKGDEVLDWR EMTARYAGAQIRLLEGGDHALSDFDLHLPAILDFLDLAP >Mature_198_residues PTTHLLYLHGFRSSPQSVKAKKMAAIVRLRHPSVRWWCPQLPPSPREALQAIMDGIAGWPREAGFESLAVVGSSLGGFYA TAVAERTGCRAVLLNPAVEPARDLSGYIGEQTAWHNAGEHFFFEPRFVDELRALQAGPLKTPENYLAVIAKGDEVLDWRE MTARYAGAQIRLLEGGDHALSDFDLHLPAILDFLDLAP
Specific function: Displays esterase activity toward palmitoyl-CoA and pNP- butyrate [H]
COG id: COG3150
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789409, Length=192, Percent_Identity=40.1041666666667, Blast_Score=139, Evalue=2e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008886 [H]
Pfam domain/function: PF05728 UPF0227 [H]
EC number: NA
Molecular weight: Translated: 21943; Mature: 21812
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTTHLLYLHGFRSSPQSVKAKKMAAIVRLRHPSVRWWCPQLPPSPREALQAIMDGIAGW CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHCCC PREAGFESLAVVGSSLGGFYATAVAERTGCRAVLLNPAVEPARDLSGYIGEQTAWHNAGE CCCCCHHHHHHHHHHCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCHHCCCCC HFFFEPRFVDELRALQAGPLKTPENYLAVIAKGDEVLDWREMTARYAGAQIRLLEGGDHA CEEECCHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCC LSDFDLHLPAILDFLDLAP CCCCCCHHHHHHHHHHCCC >Mature Secondary Structure PTTHLLYLHGFRSSPQSVKAKKMAAIVRLRHPSVRWWCPQLPPSPREALQAIMDGIAGW CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHCCC PREAGFESLAVVGSSLGGFYATAVAERTGCRAVLLNPAVEPARDLSGYIGEQTAWHNAGE CCCCCHHHHHHHHHHCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCHHCCCCC HFFFEPRFVDELRALQAGPLKTPENYLAVIAKGDEVLDWREMTARYAGAQIRLLEGGDHA CEEECCHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEECCCCC LSDFDLHLPAILDFLDLAP CCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]