| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is glnH [H]
Identifier: 91786939
GI number: 91786939
Start: 1066209
End: 1066958
Strand: Reverse
Name: glnH [H]
Synonym: Bpro_1040
Alternate gene names: 91786939
Gene position: 1066958-1066209 (Counterclockwise)
Preceding gene: 91786940
Following gene: 91786938
Centisome position: 20.52
GC content: 59.47
Gene sequence:
>750_bases ATGAAATTTCGTCGCAACTTCCTGCTGGCCAGCCTCACAGCCCTGACCCTCGGCACCACCAGCGCGCATGCACAAGACAA TGCGCTGCGCGTGGGCACCGATGCCACCTTCCCGCCCATGGAATTCGTGGAAAACGGCAAGCGCACGGGCTTTGACGTCG AGCTGGTTGAAGCCATCGCCAAGGCGATGGGCAAGCAGGTCGAATGGGTAGATATCGATTTCAAGGGGCTGATCCCCGGC CTCATGTCCAAGCGTTTTGACATGGCCGTTTCGGCCATTTACATCACCGATGAACGCAAGAAGGTCGTCGATTTCACCAA CTCCTACTATGCCGGCGGCCTGGTGGCCATGACCAAAGAGGGCAATACCGCCATCAAAAAGCTGGCCGACCTCGAGGGCA AAAAGGTCACTGTGCAGGTGGGCACCAAGTCGGTGGGCTATCTGCAGGAGCACTATCCCAAGGTGCAACGGATCGAGGTA GAAAAGAACCAGGAAATGTTCAACCTGGTGGACATTGGCCGTGCCGATGCCGCCGTGACGGGCAAGCCCGCCGCCTTTCA GTATGTGCGCACGCGCCCGGGCCTGCGCGTGCTGGAAGAGCAGCTGACCACCGAGGAATACGGCATGGCGCTGCGCAAGG ACACGCCCGAGCTCACCAGGGCGGTGAACGGTGCGATCGCCAAACTCAAGGCCGACGGCACCTATGCGGCCATCGTGAAA AAATGGTTCAGCAACAGCGCTGGCAAGTAA
Upstream 100 bases:
>100_bases ACCAGGCGCTGATCCGCATGGCGGTGGTTGCCGCCGCGCGCATCTCGCGCCACCTGACCCTTCACTGATTTCCCTTACCC CCCAACCGGAGAACCACCCC
Downstream 100 bases:
>100_bases TCCGGCAACCTTGCGACTGAGCGATGGAACTCGATTTTTCTCCCATCTGGTCCGGCTGGCCCCAGCTGTTGCGTGGTGCG CTGGTGACCGTGGAAATCAC
Product: extracellular solute-binding protein
Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]
Alternate protein names: GlnBP [H]
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MKFRRNFLLASLTALTLGTTSAHAQDNALRVGTDATFPPMEFVENGKRTGFDVELVEAIAKAMGKQVEWVDIDFKGLIPG LMSKRFDMAVSAIYITDERKKVVDFTNSYYAGGLVAMTKEGNTAIKKLADLEGKKVTVQVGTKSVGYLQEHYPKVQRIEV EKNQEMFNLVDIGRADAAVTGKPAAFQYVRTRPGLRVLEEQLTTEEYGMALRKDTPELTRAVNGAIAKLKADGTYAAIVK KWFSNSAGK
Sequences:
>Translated_249_residues MKFRRNFLLASLTALTLGTTSAHAQDNALRVGTDATFPPMEFVENGKRTGFDVELVEAIAKAMGKQVEWVDIDFKGLIPG LMSKRFDMAVSAIYITDERKKVVDFTNSYYAGGLVAMTKEGNTAIKKLADLEGKKVTVQVGTKSVGYLQEHYPKVQRIEV EKNQEMFNLVDIGRADAAVTGKPAAFQYVRTRPGLRVLEEQLTTEEYGMALRKDTPELTRAVNGAIAKLKADGTYAAIVK KWFSNSAGK >Mature_249_residues MKFRRNFLLASLTALTLGTTSAHAQDNALRVGTDATFPPMEFVENGKRTGFDVELVEAIAKAMGKQVEWVDIDFKGLIPG LMSKRFDMAVSAIYITDERKKVVDFTNSYYAGGLVAMTKEGNTAIKKLADLEGKKVTVQVGTKSVGYLQEHYPKVQRIEV EKNQEMFNLVDIGRADAAVTGKPAAFQYVRTRPGLRVLEEQLTTEEYGMALRKDTPELTRAVNGAIAKLKADGTYAAIVK KWFSNSAGK
Specific function: Involved in a glutamine-transport system glnHPQ [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787031, Length=242, Percent_Identity=38.8429752066116, Blast_Score=167, Evalue=7e-43, Organism=Escherichia coli, GI1787085, Length=242, Percent_Identity=33.0578512396694, Blast_Score=141, Evalue=4e-35, Organism=Escherichia coli, GI1788228, Length=218, Percent_Identity=37.1559633027523, Blast_Score=137, Evalue=6e-34, Organism=Escherichia coli, GI1787088, Length=247, Percent_Identity=29.9595141700405, Blast_Score=117, Evalue=6e-28, Organism=Escherichia coli, GI1788649, Length=246, Percent_Identity=31.7073170731707, Blast_Score=115, Evalue=3e-27, Organism=Escherichia coli, GI1788648, Length=226, Percent_Identity=31.4159292035398, Blast_Score=111, Evalue=6e-26, Organism=Escherichia coli, GI1786876, Length=240, Percent_Identity=27.0833333333333, Blast_Score=72, Evalue=5e-14,
Paralogues:
None
Copy number: 1440 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 460 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 27466; Mature: 27466
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFRRNFLLASLTALTLGTTSAHAQDNALRVGTDATFPPMEFVENGKRTGFDVELVEAIA CCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCHHHHHCCCCCCCCHHHHHHHH KAMGKQVEWVDIDFKGLIPGLMSKRFDMAVSAIYITDERKKVVDFTNSYYAGGLVAMTKE HHHCCCEEEEECCHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHCCCCCCCCCEEEEECC GNTAIKKLADLEGKKVTVQVGTKSVGYLQEHYPKVQRIEVEKNQEMFNLVDIGRADAAVT CCHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCCCEEC GKPAAFQYVRTRPGLRVLEEQLTTEEYGMALRKDTPELTRAVNGAIAKLKADGTYAAIVK CCCHHHHHHHCCCCHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHEEEECCCHHHHHHH KWFSNSAGK HHHCCCCCC >Mature Secondary Structure MKFRRNFLLASLTALTLGTTSAHAQDNALRVGTDATFPPMEFVENGKRTGFDVELVEAIA CCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCHHHHHCCCCCCCCHHHHHHHH KAMGKQVEWVDIDFKGLIPGLMSKRFDMAVSAIYITDERKKVVDFTNSYYAGGLVAMTKE HHHCCCEEEEECCHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHCCCCCCCCCEEEEECC GNTAIKKLADLEGKKVTVQVGTKSVGYLQEHYPKVQRIEVEKNQEMFNLVDIGRADAAVT CCHHHHHHHHCCCCEEEEEECCCCHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCCCEEC GKPAAFQYVRTRPGLRVLEEQLTTEEYGMALRKDTPELTRAVNGAIAKLKADGTYAAIVK CCCHHHHHHHCCCCHHHHHHHHHHHHHCHHHCCCCHHHHHHHHHHHEEEECCCHHHHHHH KWFSNSAGK HHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-glutamine [Periplasm]; H2O [C]
Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]
General reaction: Translocates substrate across the membrane [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]