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The map label for this gene is yecS [H]

Identifier: 91786938

GI number: 91786938

Start: 1065517

End: 1066185

Strand: Reverse

Name: yecS [H]

Synonym: Bpro_1039

Alternate gene names: 91786938

Gene position: 1066185-1065517 (Counterclockwise)

Preceding gene: 91786939

Following gene: 91786937

Centisome position: 20.5

GC content: 62.03

Gene sequence:

>669_bases
ATGGAACTCGATTTTTCTCCCATCTGGTCCGGCTGGCCCCAGCTGTTGCGTGGTGCGCTGGTGACCGTGGAAATCACGGC
GGCCTCGCTGCTGCTGGGTTGCGTCATGGGGCTGCTGGTCGGTATCGGCCGGCTCAACCCCAGGCGGCGCATTGTCTATG
GCCTGTGCACGGCCTATGTGGCGATCATCCGCGGCACGCCGCTGCTGGTGCAGTTGTTCATTCTGTTCTTTGGCCTGCCG
CAGTTCGGCATCCTGCTGCCGGCTTTTGTATGCGGCGTGATTGGCCTGGGCATCTACTCCGGAGCCTATGTTTCGGAGGT
CGTGCGTGGCGCCATCCAGTCCATTGACCGCGGCCAGATGGAGGCTGCCCGCTCCATCGGCATGTCGTCGGGGCTGGCGA
TGCGCGCCGTGGTGCTGCCCCAGGCCGTGGTGCGCATGATTCCGCCGCTGGGCAATGAATTCATTGCCCTCATCAAGAAC
TCGGCCCTGGTGTCGCTGCTGACCATCCATGACGTCATGCACGAAGGGCAAAAAATCATCAGCGTGTCCTATCGTTCACT
GGAGGTGTACCTGGCCATCGCCGTGGTGTATTTCGTACTGACCGGTGCAACCACTCTGGTGTTGCGCCGCATGGAGTTGC
GCCTGCGCGCAGGAGGGATGGTGCAATGA

Upstream 100 bases:

>100_bases
CGATCGCCAAACTCAAGGCCGACGGCACCTATGCGGCCATCGTGAAAAAATGGTTCAGCAACAGCGCTGGCAAGTAATCC
GGCAACCTTGCGACTGAGCG

Downstream 100 bases:

>100_bases
ACACGGCAAACAACGGTGCAGCACCCATGGTGCGCATTCGCGGCCTGCGCAAGTCGTATGGCGCCCATGTGGTGCTGGGT
GGCATTGATTTCGACGTCCA

Product: amino acid ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MELDFSPIWSGWPQLLRGALVTVEITAASLLLGCVMGLLVGIGRLNPRRRIVYGLCTAYVAIIRGTPLLVQLFILFFGLP
QFGILLPAFVCGVIGLGIYSGAYVSEVVRGAIQSIDRGQMEAARSIGMSSGLAMRAVVLPQAVVRMIPPLGNEFIALIKN
SALVSLLTIHDVMHEGQKIISVSYRSLEVYLAIAVVYFVLTGATTLVLRRMELRLRAGGMVQ

Sequences:

>Translated_222_residues
MELDFSPIWSGWPQLLRGALVTVEITAASLLLGCVMGLLVGIGRLNPRRRIVYGLCTAYVAIIRGTPLLVQLFILFFGLP
QFGILLPAFVCGVIGLGIYSGAYVSEVVRGAIQSIDRGQMEAARSIGMSSGLAMRAVVLPQAVVRMIPPLGNEFIALIKN
SALVSLLTIHDVMHEGQKIISVSYRSLEVYLAIAVVYFVLTGATTLVLRRMELRLRAGGMVQ
>Mature_222_residues
MELDFSPIWSGWPQLLRGALVTVEITAASLLLGCVMGLLVGIGRLNPRRRIVYGLCTAYVAIIRGTPLLVQLFILFFGLP
QFGILLPAFVCGVIGLGIYSGAYVSEVVRGAIQSIDRGQMEAARSIGMSSGLAMRAVVLPQAVVRMIPPLGNEFIALIKN
SALVSLLTIHDVMHEGQKIISVSYRSLEVYLAIAVVYFVLTGATTLVLRRMELRLRAGGMVQ

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=204, Percent_Identity=36.7647058823529, Blast_Score=152, Evalue=2e-38,
Organism=Escherichia coli, GI1787030, Length=218, Percent_Identity=38.0733944954128, Blast_Score=152, Evalue=2e-38,
Organism=Escherichia coli, GI1786874, Length=222, Percent_Identity=31.5315315315315, Blast_Score=110, Evalue=8e-26,
Organism=Escherichia coli, GI1786873, Length=228, Percent_Identity=29.3859649122807, Blast_Score=104, Evalue=5e-24,
Organism=Escherichia coli, GI1788646, Length=216, Percent_Identity=32.4074074074074, Blast_Score=103, Evalue=7e-24,
Organism=Escherichia coli, GI1787086, Length=210, Percent_Identity=30.4761904761905, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI1787087, Length=224, Percent_Identity=26.7857142857143, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI1788645, Length=207, Percent_Identity=29.951690821256, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI87082239, Length=188, Percent_Identity=30.8510638297872, Blast_Score=84, Evalue=6e-18,
Organism=Escherichia coli, GI48994930, Length=194, Percent_Identity=28.8659793814433, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24016; Mature: 24016

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELDFSPIWSGWPQLLRGALVTVEITAASLLLGCVMGLLVGIGRLNPRRRIVYGLCTAYV
CCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
AIIRGTPLLVQLFILFFGLPQFGILLPAFVCGVIGLGIYSGAYVSEVVRGAIQSIDRGQM
HHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHH
EAARSIGMSSGLAMRAVVLPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDVMHEGQKII
HHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
SVSYRSLEVYLAIAVVYFVLTGATTLVLRRMELRLRAGGMVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MELDFSPIWSGWPQLLRGALVTVEITAASLLLGCVMGLLVGIGRLNPRRRIVYGLCTAYV
CCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
AIIRGTPLLVQLFILFFGLPQFGILLPAFVCGVIGLGIYSGAYVSEVVRGAIQSIDRGQM
HHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHH
EAARSIGMSSGLAMRAVVLPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDVMHEGQKII
HHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
SVSYRSLEVYLAIAVVYFVLTGATTLVLRRMELRLRAGGMVQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]