Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is hyuE [H]

Identifier: 91786906

GI number: 91786906

Start: 1021570

End: 1022310

Strand: Reverse

Name: hyuE [H]

Synonym: Bpro_1006

Alternate gene names: 91786906

Gene position: 1022310-1021570 (Counterclockwise)

Preceding gene: 91786907

Following gene: 91786905

Centisome position: 19.66

GC content: 72.2

Gene sequence:

>741_bases
ATGCGAAAACTGCTGGTCATCAACCCGAACACGTCGGCCTCGGTCAGCGCCTTGCTGCAAACCCATGTGCAGGCGGCCGC
CGGTCTGCATGTGCAGGTGCGCACCGTCACCGCGCGTTTCGGCGCACCCTATATTTCGGACGAAGCCAGTTATGCGGTCG
CTGCCCATGCCACGCTGGACACCTGGGCCGCCGCCCTGGCCGGAGTGGATGAGGCGCCTGACGCGGTGCTGATCGGCTGC
TTTGGCGACCCCGGCCTGCTGGCGCTGCGCGAAAGCAGCCCGGTGCCGGTCACCGGCCTGGCCGAGGCGGCGTTCACCGA
GGCGGCGCGCCACGGCCGCTTTGCCATCGTCACCGGGGGCGAGCGCTGGGGCCCGATGCTGCAGCGGCTGGCCCAGGCGC
TCGGCCATGCGCCTTCACTGGCCGGCATCCACACCGTCGCGCCGACCGGTGCGCAACTTGCGGCTGACCCTGCCGCCGCG
CGCACCCTGCTCACCCAGGCCTGCCGCGACGCGGTGCGCCAGCTGGGCGCACAGGCCGTCATCCTGGGCGGGGCGGGCCT
GGCGGGCATGGCAGCGGCCCTGCAGCCCGGCGTGAGCGTGCCGCTCATCGACAGCGTGCTCGCCGGCGCCCACTGGGCCT
TGCGCAGCCACGCACCGCCATCGCGGCGCAGCAAGCCAGGCTTCGACGTACCCTGGGACAAACTCTCACCGGAGCTCACT
GCGCTCGGGCTGCAGCCTTGA

Upstream 100 bases:

>100_bases
GTGGGGGCCGAGGGTCCGGCTTCGCCGGCCCCAGGCGCCGTCCCCTTGAGGGGAGAACAGGCTACACGCAGTGAGCCTGG
ACAGGGGTGAATTCTTAACA

Downstream 100 bases:

>100_bases
ACCATGCCTTCAATAACCGGCATTCCTTCGGGATTCCATACTTCTGGCCGCACTCCAGTGCACGCTGGTGCGCGGGCCCG
GCATGAATGCGCTGCAGAAA

Product: Asp/Glu racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MRKLLVINPNTSASVSALLQTHVQAAAGLHVQVRTVTARFGAPYISDEASYAVAAHATLDTWAAALAGVDEAPDAVLIGC
FGDPGLLALRESSPVPVTGLAEAAFTEAARHGRFAIVTGGERWGPMLQRLAQALGHAPSLAGIHTVAPTGAQLAADPAAA
RTLLTQACRDAVRQLGAQAVILGGAGLAGMAAALQPGVSVPLIDSVLAGAHWALRSHAPPSRRSKPGFDVPWDKLSPELT
ALGLQP

Sequences:

>Translated_246_residues
MRKLLVINPNTSASVSALLQTHVQAAAGLHVQVRTVTARFGAPYISDEASYAVAAHATLDTWAAALAGVDEAPDAVLIGC
FGDPGLLALRESSPVPVTGLAEAAFTEAARHGRFAIVTGGERWGPMLQRLAQALGHAPSLAGIHTVAPTGAQLAADPAAA
RTLLTQACRDAVRQLGAQAVILGGAGLAGMAAALQPGVSVPLIDSVLAGAHWALRSHAPPSRRSKPGFDVPWDKLSPELT
ALGLQP
>Mature_246_residues
MRKLLVINPNTSASVSALLQTHVQAAAGLHVQVRTVTARFGAPYISDEASYAVAAHATLDTWAAALAGVDEAPDAVLIGC
FGDPGLLALRESSPVPVTGLAEAAFTEAARHGRFAIVTGGERWGPMLQRLAQALGHAPSLAGIHTVAPTGAQLAADPAAA
RTLLTQACRDAVRQLGAQAVILGGAGLAGMAAALQPGVSVPLIDSVLAGAHWALRSHAPPSRRSKPGFDVPWDKLSPELT
ALGLQP

Specific function: Responsible for racemization of the D-5-substituted hydantoins to their corresponding L-amino acids [H]

COG id: COG4126

COG function: function code E; Hydantoin racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To yeast DCG1 and S.pombe SPAC1F7.10 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: =5.1.99.5 [H]

Molecular weight: Translated: 25105; Mature: 25105

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLLVINPNTSASVSALLQTHVQAAAGLHVQVRTVTARFGAPYISDEASYAVAAHATLD
CCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEHHCCCCCCCCCCEEEEEHHHHH
TWAAALAGVDEAPDAVLIGCFGDPGLLALRESSPVPVTGLAEAAFTEAARHGRFAIVTGG
HHHHHHHCCCCCCCEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECC
ERWGPMLQRLAQALGHAPSLAGIHTVAPTGAQLAADPAAARTLLTQACRDAVRQLGAQAV
HHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCEE
ILGGAGLAGMAAALQPGVSVPLIDSVLAGAHWALRSHAPPSRRSKPGFDVPWDKLSPELT
EEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCE
ALGLQP
EECCCC
>Mature Secondary Structure
MRKLLVINPNTSASVSALLQTHVQAAAGLHVQVRTVTARFGAPYISDEASYAVAAHATLD
CCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEHHCCCCCCCCCCEEEEEHHHHH
TWAAALAGVDEAPDAVLIGCFGDPGLLALRESSPVPVTGLAEAAFTEAARHGRFAIVTGG
HHHHHHHCCCCCCCEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEEECC
ERWGPMLQRLAQALGHAPSLAGIHTVAPTGAQLAADPAAARTLLTQACRDAVRQLGAQAV
HHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCEE
ILGGAGLAGMAAALQPGVSVPLIDSVLAGAHWALRSHAPPSRRSKPGFDVPWDKLSPELT
EEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCE
ALGLQP
EECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1339422 [H]