| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is panC
Identifier: 91786797
GI number: 91786797
Start: 913113
End: 913961
Strand: Reverse
Name: panC
Synonym: Bpro_0895
Alternate gene names: 91786797
Gene position: 913961-913113 (Counterclockwise)
Preceding gene: 91786798
Following gene: 91786793
Centisome position: 17.58
GC content: 64.66
Gene sequence:
>849_bases ATGCACATCGTTCACAGCATCGCCGAACTGCGCGAAAAACTGGCACCCTTCCAGCGCCCGGCCTTTGTGCCCACCATGGG CAACCTGCATGACGGCCACATCGCGCTGGTCAAGCAGGCCAAGCCGCTGGGCGACGTGACGGTGTCCAGCATTTTTGTGA ATCGCCTGCAGTTTGCGCCGCATGAGGATTTCGACAGCTACCCGCGCACGCTGGACGCCGATGCCCAGCGCCTGGAAGCC GCAGGCTGCAATGTGCTGTTTGCGCCGCGCGAGAAAGAGCTGTACCCCGAGCCGCAGACCTACAAGATACACCCCGCCAC CGACCTGGGCGACATCCTCGAGGGACACTTTCGCCCCGGCTTTTTCATCGGCGTCAGCACGGTGGTGCTCAAGCTTTTTT CATGCGTCTATGCCGGCAAGCCGTCGGGCGTGGCCGCTTTCGGCAAAAAGGACTACCAGCAGGTGCTGGTGGTGCGCCGC ATGGTGCAGCAGTTTGCCCTGCCAATCGAAATCCTGGCCGGTGAGACCCAGCGTGCGGCGGACGGGCTGGCGCTGTCATC ACGCAACAGCTACCTGAGCCCCAACGAGCGCATTGAAGCGGCGCAACTGTCCAAAGCCCTGAAGGCGCTTGGCGATGCCG CCCGGGCCACGCCAACGCCCGACCTGCTGGCGCTGGAAGCCCAGGCCATGCAGGCGCTGGCACGCCGCGGCTGGAAGCCC GACTACCTGACCGTGCGCCGCCGCGCTGACCTGCAGCCACCGCAGGGGCCGCTGGCTTCAGAGCCGCTGGTGGTGCTGGG TGCGGCCAAACTGGGCAACACCCGTCTGATTGACAACCTGGAAATTTGA
Upstream 100 bases:
>100_bases GGCTTATGTCCGCGCCGTCAAAGACGGCAGCTTCCCGGTCAATGCCACCCACGCGTGGTAATCCGGACCCAGTCAAAAAA AAAGCAGCCGAGGAGACCTC
Downstream 100 bases:
>100_bases GCGGGCCGAGGCGGGGAGCGGAGCGGCACCCCGATTCGCTCTACTGTTGCGTGTCAGCGGTGTCAGCGTCTGCAGGCTGC TCCGGGGACGACTCTGCAGG
Product: pantoate--beta-alanine ligase
Products: NA
Alternate protein names: PS; Pantoate--beta-alanine ligase; Pantoate-activating enzyme
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MHIVHSIAELREKLAPFQRPAFVPTMGNLHDGHIALVKQAKPLGDVTVSSIFVNRLQFAPHEDFDSYPRTLDADAQRLEA AGCNVLFAPREKELYPEPQTYKIHPATDLGDILEGHFRPGFFIGVSTVVLKLFSCVYAGKPSGVAAFGKKDYQQVLVVRR MVQQFALPIEILAGETQRAADGLALSSRNSYLSPNERIEAAQLSKALKALGDAARATPTPDLLALEAQAMQALARRGWKP DYLTVRRRADLQPPQGPLASEPLVVLGAAKLGNTRLIDNLEI
Sequences:
>Translated_282_residues MHIVHSIAELREKLAPFQRPAFVPTMGNLHDGHIALVKQAKPLGDVTVSSIFVNRLQFAPHEDFDSYPRTLDADAQRLEA AGCNVLFAPREKELYPEPQTYKIHPATDLGDILEGHFRPGFFIGVSTVVLKLFSCVYAGKPSGVAAFGKKDYQQVLVVRR MVQQFALPIEILAGETQRAADGLALSSRNSYLSPNERIEAAQLSKALKALGDAARATPTPDLLALEAQAMQALARRGWKP DYLTVRRRADLQPPQGPLASEPLVVLGAAKLGNTRLIDNLEI >Mature_282_residues MHIVHSIAELREKLAPFQRPAFVPTMGNLHDGHIALVKQAKPLGDVTVSSIFVNRLQFAPHEDFDSYPRTLDADAQRLEA AGCNVLFAPREKELYPEPQTYKIHPATDLGDILEGHFRPGFFIGVSTVVLKLFSCVYAGKPSGVAAFGKKDYQQVLVVRR MVQQFALPIEILAGETQRAADGLALSSRNSYLSPNERIEAAQLSKALKALGDAARATPTPDLLALEAQAMQALARRGWKP DYLTVRRRADLQPPQGPLASEPLVVLGAAKLGNTRLIDNLEI
Specific function: Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
COG id: COG0414
COG function: function code H; Panthothenate synthetase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pantothenate synthetase family
Homologues:
Organism=Escherichia coli, GI1786325, Length=286, Percent_Identity=43.006993006993, Blast_Score=194, Evalue=7e-51, Organism=Saccharomyces cerevisiae, GI6322046, Length=316, Percent_Identity=35.4430379746835, Blast_Score=149, Evalue=4e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PANC_POLSJ (Q12F41)
Other databases:
- EMBL: CP000316 - RefSeq: YP_547749.1 - STRING: Q12F41 - GeneID: 4011203 - GenomeReviews: CP000316_GR - KEGG: pol:Bpro_0895 - NMPDR: fig|296591.1.peg.3037 - eggNOG: COG0414 - HOGENOM: HBG428839 - OMA: RLIDNFT - PhylomeDB: Q12F41 - ProtClustDB: PRK00380 - BioCyc: PSP296591:BPRO_0895-MONOMER - GO: GO:0005737 - HAMAP: MF_00158 - InterPro: IPR003721 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - PANTHER: PTHR21299:SF1 - TIGRFAMs: TIGR00018
Pfam domain/function: PF02569 Pantoate_ligase
EC number: =6.3.2.1
Molecular weight: Translated: 30893; Mature: 30893
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: ACT_SITE 33-33 BINDING 57-57 BINDING 57-57 BINDING 154-154
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIVHSIAELREKLAPFQRPAFVPTMGNLHDGHIALVKQAKPLGDVTVSSIFVNRLQFAP CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCC HEDFDSYPRTLDADAQRLEAAGCNVLFAPREKELYPEPQTYKIHPATDLGDILEGHFRPG CCCHHHCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCEEECCCCCHHHHHHCCCCCC FFIGVSTVVLKLFSCVYAGKPSGVAAFGKKDYQQVLVVRRMVQQFALPIEILAGETQRAA HHHHHHHHHHHHHHHHHCCCCCCEEHHCHHHHHHHHHHHHHHHHHCCCHHEECCCCHHHH DGLALSSRNSYLSPNERIEAAQLSKALKALGDAARATPTPDLLALEAQAMQALARRGWKP CCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC DYLTVRRRADLQPPQGPLASEPLVVLGAAKLGNTRLIDNLEI CCEEHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MHIVHSIAELREKLAPFQRPAFVPTMGNLHDGHIALVKQAKPLGDVTVSSIFVNRLQFAP CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCC HEDFDSYPRTLDADAQRLEAAGCNVLFAPREKELYPEPQTYKIHPATDLGDILEGHFRPG CCCHHHCCCCCCHHHHHHHHCCCCEEECCCCCCCCCCCCCEEECCCCCHHHHHHCCCCCC FFIGVSTVVLKLFSCVYAGKPSGVAAFGKKDYQQVLVVRRMVQQFALPIEILAGETQRAA HHHHHHHHHHHHHHHHHCCCCCCEEHHCHHHHHHHHHHHHHHHHHCCCHHEECCCCHHHH DGLALSSRNSYLSPNERIEAAQLSKALKALGDAARATPTPDLLALEAQAMQALARRGWKP CCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC DYLTVRRRADLQPPQGPLASEPLVVLGAAKLGNTRLIDNLEI CCEEHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA