| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is cobT [H]
Identifier: 91786643
GI number: 91786643
Start: 756781
End: 757866
Strand: Reverse
Name: cobT [H]
Synonym: Bpro_0741
Alternate gene names: 91786643
Gene position: 757866-756781 (Counterclockwise)
Preceding gene: 91786644
Following gene: 91786642
Centisome position: 14.57
GC content: 70.35
Gene sequence:
>1086_bases ATGACCGCCACCACCTCTTCCCCCCCTGTCTCCTCTTCTCACCCGGCCCTGCACATTCCGGCGATCGCGCCCATCGCCGA CGCCGTGCTGGCGGACCGGTTGCAGCGCAAGATCGACCACAAGACCAAGCCCGTGGGCGCACTGGGCGCGCTGGAGGGCC TGGCGCTGCAGCTGGGCCTGATCCAGCGCCGCGACACCGTCACGCTGCACGCGCCGCAAATGGTGGTGTTTGCGGCCGAC CACGGCATTGCCGCAGAAGGCGTGTCCGCCTATCCGCAGGCCGTCACCGTGCAGATGGTGGGCAACATGCTGGCCGGCGG CGCAGCCATCAATGTGTTTGCGCGCCAGCACGGCTTTGCATTGCACGTGGTCGACGCCGGCGTCGCCGCCGACCTGCCCG CGCATCCCCAGCTGCTGCAGCGCAAGATCGCGCACGGCACGCGCAACCTCTGCAGCGAGCCCGCCATGTCGCTGGCCGAG GCCGATGCGGCGCTGCAGGCGGGCATGGCCGTCGTGCGGGCCCTGCCCGGCAATGTGGTGGCGCTGGGCGAAATGGGAAT TGCCAACACCTCGGCGGCGGCCCTGCTATTTGCGCGGCTGGCCGGCGCCAGCCTGGAGGACGCCACCGGGCGCGGCACGG GCCTGACCGACCCACAGTTGCAGCACAAGCAGGGCGTGCTGCTGCGCGCCCTGGAACGCCATGCTGATGCCACCCGGCCG CTTGACGCGCTCGCCGCGCTCGGTGGTTTTGAAATTGCCATGATGAGCGGCGCGATGCTGCAGGCCGCCAGCGAACGCCG CGTGGTGCTGGTCGACGGTTTCATTGCCGGCGCCGCAGCGCTGGTGGCCCACGCGCTGGCGCCGCAGGTGCGCGACTACC TGGTGTTTTGCCACCGCTCGGCCGAGCGTGGCCACGGCCTGCTGCTGGCCCACCTGAAGGCCACGCCACTGCTTGAACTC GATCTGCGGCTGGGAGAAGGCACGGGCGCCCTGCTGGCCTGGCCGCTGGTGCAGTCGGCGGCGCTGTTCCTGGACGAGAT GGCCAGCTTTGACTCGGCCGGCGTGAGTGGCAAGGAGAACCCCTGA
Upstream 100 bases:
>100_bases CTGCTTCAACGCCCCCGCAGGGCCAGGAGGCAAGCGCTGACAGCGCCGCCTCGTGCTACTGCCCGGCCTGCCTCCAGCTG ATCACCGCGAACCGAGCCCG
Downstream 100 bases:
>100_bases ATCCGCCAGACCCTGCGATAACCGCCCCATGAATCCGATCAGCCAGTTTGTCCGCGAATACCTGCTCGCCGTCCAGTTCT TCACCCGCATACCCGTCGTG
Product: nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase
Products: NA
Alternate protein names: NN:DBI PRT; N(1)-alpha-phosphoribosyltransferase [H]
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MTATTSSPPVSSSHPALHIPAIAPIADAVLADRLQRKIDHKTKPVGALGALEGLALQLGLIQRRDTVTLHAPQMVVFAAD HGIAAEGVSAYPQAVTVQMVGNMLAGGAAINVFARQHGFALHVVDAGVAADLPAHPQLLQRKIAHGTRNLCSEPAMSLAE ADAALQAGMAVVRALPGNVVALGEMGIANTSAAALLFARLAGASLEDATGRGTGLTDPQLQHKQGVLLRALERHADATRP LDALAALGGFEIAMMSGAMLQAASERRVVLVDGFIAGAAALVAHALAPQVRDYLVFCHRSAERGHGLLLAHLKATPLLEL DLRLGEGTGALLAWPLVQSAALFLDEMASFDSAGVSGKENP
Sequences:
>Translated_361_residues MTATTSSPPVSSSHPALHIPAIAPIADAVLADRLQRKIDHKTKPVGALGALEGLALQLGLIQRRDTVTLHAPQMVVFAAD HGIAAEGVSAYPQAVTVQMVGNMLAGGAAINVFARQHGFALHVVDAGVAADLPAHPQLLQRKIAHGTRNLCSEPAMSLAE ADAALQAGMAVVRALPGNVVALGEMGIANTSAAALLFARLAGASLEDATGRGTGLTDPQLQHKQGVLLRALERHADATRP LDALAALGGFEIAMMSGAMLQAASERRVVLVDGFIAGAAALVAHALAPQVRDYLVFCHRSAERGHGLLLAHLKATPLLEL DLRLGEGTGALLAWPLVQSAALFLDEMASFDSAGVSGKENP >Mature_360_residues TATTSSPPVSSSHPALHIPAIAPIADAVLADRLQRKIDHKTKPVGALGALEGLALQLGLIQRRDTVTLHAPQMVVFAADH GIAAEGVSAYPQAVTVQMVGNMLAGGAAINVFARQHGFALHVVDAGVAADLPAHPQLLQRKIAHGTRNLCSEPAMSLAEA DAALQAGMAVVRALPGNVVALGEMGIANTSAAALLFARLAGASLEDATGRGTGLTDPQLQHKQGVLLRALERHADATRPL DALAALGGFEIAMMSGAMLQAASERRVVLVDGFIAGAAALVAHALAPQVRDYLVFCHRSAERGHGLLLAHLKATPLLELD LRLGEGTGALLAWPLVQSAALFLDEMASFDSAGVSGKENP
Specific function: Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) [H]
COG id: COG2038
COG function: function code H; NaMN:DMB phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CobT family [H]
Homologues:
Organism=Escherichia coli, GI1788300, Length=342, Percent_Identity=37.1345029239766, Blast_Score=196, Evalue=2e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003200 - InterPro: IPR023195 - InterPro: IPR017846 [H]
Pfam domain/function: PF02277 DBI_PRT [H]
EC number: =2.4.2.21 [H]
Molecular weight: Translated: 37221; Mature: 37090
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATTSSPPVSSSHPALHIPAIAPIADAVLADRLQRKIDHKTKPVGALGALEGLALQLGL CCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH IQRRDTVTLHAPQMVVFAADHGIAAEGVSAYPQAVTVQMVGNMLAGGAAINVFARQHGFA HCCCCEEEEECCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCHHEEEEECCCCCE LHVVDAGVAADLPAHPQLLQRKIAHGTRNLCSEPAMSLAEADAALQAGMAVVRALPGNVV EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE ALGEMGIANTSAAALLFARLAGASLEDATGRGTGLTDPQLQHKQGVLLRALERHADATRP EEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC LDALAALGGFEIAMMSGAMLQAASERRVVLVDGFIAGAAALVAHALAPQVRDYLVFCHRS HHHHHHHCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCC AERGHGLLLAHLKATPLLELDLRLGEGTGALLAWPLVQSAALFLDEMASFDSAGVSGKEN CCCCCCEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC P C >Mature Secondary Structure TATTSSPPVSSSHPALHIPAIAPIADAVLADRLQRKIDHKTKPVGALGALEGLALQLGL CCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH IQRRDTVTLHAPQMVVFAADHGIAAEGVSAYPQAVTVQMVGNMLAGGAAINVFARQHGFA HCCCCEEEEECCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCHHEEEEECCCCCE LHVVDAGVAADLPAHPQLLQRKIAHGTRNLCSEPAMSLAEADAALQAGMAVVRALPGNVV EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE ALGEMGIANTSAAALLFARLAGASLEDATGRGTGLTDPQLQHKQGVLLRALERHADATRP EEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC LDALAALGGFEIAMMSGAMLQAASERRVVLVDGFIAGAAALVAHALAPQVRDYLVFCHRS HHHHHHHCCHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCC AERGHGLLLAHLKATPLLELDLRLGEGTGALLAWPLVQSAALFLDEMASFDSAGVSGKEN CCCCCCEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC P C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA