| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
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The map label for this gene is glmS [H]
Identifier: 91786579
GI number: 91786579
Start: 686819
End: 688669
Strand: Direct
Name: glmS [H]
Synonym: Bpro_0675
Alternate gene names: 91786579
Gene position: 686819-688669 (Clockwise)
Preceding gene: 91786577
Following gene: 91786586
Centisome position: 13.21
GC content: 64.83
Gene sequence:
>1851_bases ATGTGCGGCATCGTTGCGTCGGTTTCGACGAGAAATATTGTTCCCATCCTGGTGCAGGGCCTGCAGCGGCTGGAATACCG CGGTTATGACTCTTGCGGCGTCGCCGTGTATGCCGATGGCCTGAAGCGCGCGCGCAGCACCTCGCGCGTGGCCGAGCTGC AAAGCCAGGTCGACCACGATCACCTGCAGGGCAGCACCGGCATTGCCCACACCCGCTGGGCCACGCACGGTGCGCCCGCG GTGCACAACGCGCATCCCCACTTCAGCCATGGCGCCGGCGCCAACCAGGCATCGCGCCCCGGCAAGGTGGCGCTGGTGCA CAACGGCATCATTGAAAACCACGACGAGCTGCGCGTCGCGCTGCAGGCCAAGGGCTATGTGTTCGCCAGCCAGACCGACA CCGAAGTCATCGTGCACCTGATGGACAGCCTGTACGACGGCGACCTCTTTGAAGCGCTGAAGGCAACCGTGGCCCAGCTG CATGGCGCCTATGCGATTGCCGCCTTCTGCAAGGACGAGCCGCACCGCGTGGTGGGCGCGCGCGCGGGCTCGCCGCTGAT TCTTGGCGTCGGCAAGGGCAACTCCGAAAACTTCCTGGCCAGCGATGCGATGGCACTGGCCGGCGTGACCGACCAGATCG TGTACCTCGAAGAAGGCGACATGGTCGACATGCAGCTGGGCAAATACTGGGTGCTTGACCGCCAGGGCAAGGCCGTGCAG CGAGTGGTCAAAACCGTGCAGGCGCACAGTGGTGCCGCAGAGCTGGGGCCGTATCGCCACTACATGCAGAAGGAAATTTT CGAGCAGCCGCGCGCCATTGCCGACACGCTCGAAGGCGTGCAGGGCATTGTTCCGGAACTCTTTGGCGATGGGGCTTACC GCGTGTTCAAGGAGATCGACTCGGTGCTGATTCTGGCGTGCGGCACCAGCTACTACAGCGGCTGTGCGGCCAAGTACTGG CTCGAATCCATTGCCGGCATTCCCACCCAGGTGGAAGTCGCCAGCGAGTACCGTTACCGCACCTCGGTGCCCAACCCCAG GTCGCTGGTCGTCACCATCACGCAAAGCGGCGAGACCGCCGATACGCTGGCGGCGTTGCGCCACGCGCAGAGCCTGGGCA TGCAGCATACGCTGACCATCTGCAACGTGGCCACCTCGGCGATGGTGCGCGAGTGCAAGCTCGCCTACATCACGCGCGCC GGTGTTGAAATCGGCGTGGCCTCCACCAAGGCCTTTACCACCCAGCTCGCCGGGCTGTTTCTGCTGACGCTGGCGCTGGC CCAGAGCAAGGGCCGGCTGACCGACGAAGCAGAAGCGGAACACCTCAAGGCCATGCGCCACCTGCCCGCCGCCCTGCAGG CCGTGCTGGCGCTGGAGCCGCAGGTCATCAGCTGGTCAGAAGATTTCGCGAAGATGGAAAACGCGCTGTTTCTCGGCCGT GGCCTGCACTACCCGATTGCGCTGGAGGGCGCACTCAAGCTGAAAGAGATCAGCTATATCCACGCCGAGGCCTACCCGGC CGGCGAACTCAAGCACGGCCCGCTGGCCCTGGTGACCAGCGCCATGCCCGTGGTCACGGTCGCACCCAACGACGCCCTGC TGGAAAAGCTCAAGAGCAATATGCAGGAAGTCCGCGCCCGCGGCGGCGTGCTCTACGTGCTGGCCGACGCAGACAGCCAC ATTGAAAGTGGCGAGGGCCTGCACGTCATCCGCATGCCCGAGCACTACGGAGCCTTGAGCCCGCTGCTGCACGTGGTGCC GCTGCAGCTGCTGGCGTATCACACGGCGTGTGCGCGGGGGACGGATGTGGACAAGCCCCGCAATCTTGCAAAGAGCGTTA CCGTCGAATGA
Upstream 100 bases:
>100_bases CAAAGAATATTGAAATTAAATTCCATAAATCAAGAAAAATCAATCACATAAGAAAACAACATGCACGTAGCATCGATGCA TTGTTTTTCAGGAGACGTCC
Downstream 100 bases:
>100_bases CGGTCACAGTGCGCGCAAGCTGATTGCGAGGAATAAAGTACGTCGGGTTAAATAAAAGTCCGTCGGGCATTATTCATAAT GTGAAATCTTCTGAGCGTCA
Product: glucosamine--fructose-6-phosphate aminotransferase
Products: NA
Alternate protein names: D-fructose-6-phosphate amidotransferase; GFAT; Glucosamine-6-phosphate synthase; Hexosephosphate aminotransferase; L-glutamine-D-fructose-6-phosphate amidotransferase [H]
Number of amino acids: Translated: 616; Mature: 616
Protein sequence:
>616_residues MCGIVASVSTRNIVPILVQGLQRLEYRGYDSCGVAVYADGLKRARSTSRVAELQSQVDHDHLQGSTGIAHTRWATHGAPA VHNAHPHFSHGAGANQASRPGKVALVHNGIIENHDELRVALQAKGYVFASQTDTEVIVHLMDSLYDGDLFEALKATVAQL HGAYAIAAFCKDEPHRVVGARAGSPLILGVGKGNSENFLASDAMALAGVTDQIVYLEEGDMVDMQLGKYWVLDRQGKAVQ RVVKTVQAHSGAAELGPYRHYMQKEIFEQPRAIADTLEGVQGIVPELFGDGAYRVFKEIDSVLILACGTSYYSGCAAKYW LESIAGIPTQVEVASEYRYRTSVPNPRSLVVTITQSGETADTLAALRHAQSLGMQHTLTICNVATSAMVRECKLAYITRA GVEIGVASTKAFTTQLAGLFLLTLALAQSKGRLTDEAEAEHLKAMRHLPAALQAVLALEPQVISWSEDFAKMENALFLGR GLHYPIALEGALKLKEISYIHAEAYPAGELKHGPLALVTSAMPVVTVAPNDALLEKLKSNMQEVRARGGVLYVLADADSH IESGEGLHVIRMPEHYGALSPLLHVVPLQLLAYHTACARGTDVDKPRNLAKSVTVE
Sequences:
>Translated_616_residues MCGIVASVSTRNIVPILVQGLQRLEYRGYDSCGVAVYADGLKRARSTSRVAELQSQVDHDHLQGSTGIAHTRWATHGAPA VHNAHPHFSHGAGANQASRPGKVALVHNGIIENHDELRVALQAKGYVFASQTDTEVIVHLMDSLYDGDLFEALKATVAQL HGAYAIAAFCKDEPHRVVGARAGSPLILGVGKGNSENFLASDAMALAGVTDQIVYLEEGDMVDMQLGKYWVLDRQGKAVQ RVVKTVQAHSGAAELGPYRHYMQKEIFEQPRAIADTLEGVQGIVPELFGDGAYRVFKEIDSVLILACGTSYYSGCAAKYW LESIAGIPTQVEVASEYRYRTSVPNPRSLVVTITQSGETADTLAALRHAQSLGMQHTLTICNVATSAMVRECKLAYITRA GVEIGVASTKAFTTQLAGLFLLTLALAQSKGRLTDEAEAEHLKAMRHLPAALQAVLALEPQVISWSEDFAKMENALFLGR GLHYPIALEGALKLKEISYIHAEAYPAGELKHGPLALVTSAMPVVTVAPNDALLEKLKSNMQEVRARGGVLYVLADADSH IESGEGLHVIRMPEHYGALSPLLHVVPLQLLAYHTACARGTDVDKPRNLAKSVTVE >Mature_616_residues MCGIVASVSTRNIVPILVQGLQRLEYRGYDSCGVAVYADGLKRARSTSRVAELQSQVDHDHLQGSTGIAHTRWATHGAPA VHNAHPHFSHGAGANQASRPGKVALVHNGIIENHDELRVALQAKGYVFASQTDTEVIVHLMDSLYDGDLFEALKATVAQL HGAYAIAAFCKDEPHRVVGARAGSPLILGVGKGNSENFLASDAMALAGVTDQIVYLEEGDMVDMQLGKYWVLDRQGKAVQ RVVKTVQAHSGAAELGPYRHYMQKEIFEQPRAIADTLEGVQGIVPELFGDGAYRVFKEIDSVLILACGTSYYSGCAAKYW LESIAGIPTQVEVASEYRYRTSVPNPRSLVVTITQSGETADTLAALRHAQSLGMQHTLTICNVATSAMVRECKLAYITRA GVEIGVASTKAFTTQLAGLFLLTLALAQSKGRLTDEAEAEHLKAMRHLPAALQAVLALEPQVISWSEDFAKMENALFLGR GLHYPIALEGALKLKEISYIHAEAYPAGELKHGPLALVTSAMPVVTVAPNDALLEKLKSNMQEVRARGGVLYVLADADSH IESGEGLHVIRMPEHYGALSPLLHVVPLQLLAYHTACARGTDVDKPRNLAKSVTVE
Specific function: Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source [H]
COG id: COG0449
COG function: function code M; Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 SIS domains [H]
Homologues:
Organism=Homo sapiens, GI4826742, Length=692, Percent_Identity=34.971098265896, Blast_Score=382, Evalue=1e-106, Organism=Homo sapiens, GI205277386, Length=693, Percent_Identity=34.9206349206349, Blast_Score=379, Evalue=1e-105, Organism=Escherichia coli, GI1790167, Length=624, Percent_Identity=51.4423076923077, Blast_Score=605, Evalue=1e-174, Organism=Escherichia coli, GI1788651, Length=224, Percent_Identity=27.6785714285714, Blast_Score=71, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17539970, Length=432, Percent_Identity=38.4259259259259, Blast_Score=273, Evalue=2e-73, Organism=Caenorhabditis elegans, GI17532899, Length=434, Percent_Identity=37.3271889400922, Blast_Score=271, Evalue=1e-72, Organism=Caenorhabditis elegans, GI17532897, Length=434, Percent_Identity=37.3271889400922, Blast_Score=270, Evalue=1e-72, Organism=Saccharomyces cerevisiae, GI6322745, Length=433, Percent_Identity=35.1039260969977, Blast_Score=253, Evalue=6e-68, Organism=Saccharomyces cerevisiae, GI6323731, Length=429, Percent_Identity=28.4382284382284, Blast_Score=179, Evalue=8e-46, Organism=Saccharomyces cerevisiae, GI6323730, Length=266, Percent_Identity=33.8345864661654, Blast_Score=124, Evalue=3e-29, Organism=Drosophila melanogaster, GI21357745, Length=693, Percent_Identity=34.1991341991342, Blast_Score=364, Evalue=1e-101,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000583 - InterPro: IPR017932 - InterPro: IPR005855 - InterPro: IPR001347 [H]
Pfam domain/function: PF00310 GATase_2; PF01380 SIS [H]
EC number: =2.6.1.16 [H]
Molecular weight: Translated: 66423; Mature: 66423
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: PS00443 GATASE_TYPE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCGIVASVSTRNIVPILVQGLQRLEYRGYDSCGVAVYADGLKRARSTSRVAELQSQVDHD CCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH HLQGSTGIAHTRWATHGAPAVHNAHPHFSHGAGANQASRPGKVALVHNGIIENHDELRVA HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEE LQAKGYVFASQTDTEVIVHLMDSLYDGDLFEALKATVAQLHGAYAIAAFCKDEPHRVVGA EEECCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHEEEHHCCCCCEEEEC RAGSPLILGVGKGNSENFLASDAMALAGVTDQIVYLEEGDMVDMQLGKYWVLDRQGKAVQ CCCCCEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEECCCEEEEECCCEEEEECCCHHHH RVVKTVQAHSGAAELGPYRHYMQKEIFEQPRAIADTLEGVQGIVPELFGDGAYRVFKEID HHHHHHHHCCCCHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH SVLILACGTSYYSGCAAKYWLESIAGIPTQVEVASEYRYRTSVPNPRSLVVTITQSGETA HEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCCCCCCCEEEEEEECCCCHH DTLAALRHAQSLGMQHTLTICNVATSAMVRECKLAYITRAGVEIGVASTKAFTTQLAGLF HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHH LLTLALAQSKGRLTDEAEAEHLKAMRHLPAALQAVLALEPQVISWSEDFAKMENALFLGR HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHEEECC GLHYPIALEGALKLKEISYIHAEAYPAGELKHGPLALVTSAMPVVTVAPNDALLEKLKSN CCCCCEEECCCEEHHHHHEEEECCCCCCCCCCCCHHHHCCCCCEEEECCCHHHHHHHHHH MQEVRARGGVLYVLADADSHIESGEGLHVIRMPEHYGALSPLLHVVPLQLLAYHTACARG HHHHHHCCCEEEEEECCCCCCCCCCCEEEEECCHHHCHHHHHHHHHHHHHHHHHHHHCCC TDVDKPRNLAKSVTVE CCCCCHHHHHHHCCCC >Mature Secondary Structure MCGIVASVSTRNIVPILVQGLQRLEYRGYDSCGVAVYADGLKRARSTSRVAELQSQVDHD CCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHH HLQGSTGIAHTRWATHGAPAVHNAHPHFSHGAGANQASRPGKVALVHNGIIENHDELRVA HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEE LQAKGYVFASQTDTEVIVHLMDSLYDGDLFEALKATVAQLHGAYAIAAFCKDEPHRVVGA EEECCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHEEEHHCCCCCEEEEC RAGSPLILGVGKGNSENFLASDAMALAGVTDQIVYLEEGDMVDMQLGKYWVLDRQGKAVQ CCCCCEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEECCCEEEEECCCEEEEECCCHHHH RVVKTVQAHSGAAELGPYRHYMQKEIFEQPRAIADTLEGVQGIVPELFGDGAYRVFKEID HHHHHHHHCCCCHHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH SVLILACGTSYYSGCAAKYWLESIAGIPTQVEVASEYRYRTSVPNPRSLVVTITQSGETA HEEEEEECCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCCCCCCCEEEEEEECCCCHH DTLAALRHAQSLGMQHTLTICNVATSAMVRECKLAYITRAGVEIGVASTKAFTTQLAGLF HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHH LLTLALAQSKGRLTDEAEAEHLKAMRHLPAALQAVLALEPQVISWSEDFAKMENALFLGR HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHEEECC GLHYPIALEGALKLKEISYIHAEAYPAGELKHGPLALVTSAMPVVTVAPNDALLEKLKSN CCCCCEEECCCEEHHHHHEEEECCCCCCCCCCCCHHHHCCCCCEEEECCCHHHHHHHHHH MQEVRARGGVLYVLADADSHIESGEGLHVIRMPEHYGALSPLLHVVPLQLLAYHTACARG HHHHHHCCCEEEEEECCCCCCCCCCCEEEEECCHHHCHHHHHHHHHHHHHHHHHHHHCCC TDVDKPRNLAKSVTVE CCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12910271 [H]