Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91786570

Identifier: 91786570

GI number: 91786570

Start: 677981

End: 678496

Strand: Reverse

Name: 91786570

Synonym: Bpro_0665

Alternate gene names: NA

Gene position: 678496-677981 (Counterclockwise)

Preceding gene: 91786572

Following gene: 91786569

Centisome position: 13.05

GC content: 65.7

Gene sequence:

>516_bases
ATGGCGACTCCCAAAGACGATTTTGCAATCTACTGCTGTGAACTGCTGTCCGGCGTCGGGCCGTGCGTTGCCAGGCGCAT
GTTTGGCGGCTACGGCATCAGCACCTCAGGCCTGACGCTGGCGCTGGTGGCCGATCTCGGGGGCGGGGAAAAGCTCTGGC
TCAAGGCCGATGCAGATACCCGCGGCCGGTTTGAAGCCGCGGGCTGTGAACGGTTTACCTATGACATCACCCGAAACGGC
GAGCGCTTGGCGCACAGCCTGAATTATTACAGCGCCCCCGAGGAGGCGATGGAGTCCGCTCAGTTGATGCTGCAGTGGGC
GCGGGTGTCTCTCGATTGCGCGTTGAAAGCGCGTTCTGCCAAATCACCGCGGGCCCGGGTCGCCAGAAAAACCACCGCAA
AACCGGTCAGCGCAACCTCGACCGCCGCCGCCACACCGCCGGCCAGGCCACGGGCCAGCCGGCCCACCGCACCGCCCACC
AGGCCGAGCGCCAGGCGCAAGTCAAGCAGGGGCTGA

Upstream 100 bases:

>100_bases
TTAAACCACTACCCATGCGGCCACATGGGAAAGCATCGAACACTCACCCTTTCGTGAAGGTTTCGCCACGGTTTCGCCGG
GCTTGCGCTAAGGTTGCGGT

Downstream 100 bases:

>100_bases
ACCACGCCCGCGCGCCAGCCTGTGGCCTTCGCCGGCACGGGGTGGGCGGCCGCCGCGGGCTCCCAGTTGAAGTAGGCCGA
CGACGCATGCCCCACGCCAA

Product: TfoX-like protein

Products: NA

Alternate protein names: TfoX Domain Protein; TfoX-Like Protein; TfoX-Like; TfoX N-Terminal; DNA Transformation Protein TfoX; TfoX N-Terminal Domain Protein; Regulator Of Competence-Specific Genes-Like Protein; TfoX N-Terminal Domain Superfamily; Regulator Of Competence-Specific Gene

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MATPKDDFAIYCCELLSGVGPCVARRMFGGYGISTSGLTLALVADLGGGEKLWLKADADTRGRFEAAGCERFTYDITRNG
ERLAHSLNYYSAPEEAMESAQLMLQWARVSLDCALKARSAKSPRARVARKTTAKPVSATSTAAATPPARPRASRPTAPPT
RPSARRKSSRG

Sequences:

>Translated_171_residues
MATPKDDFAIYCCELLSGVGPCVARRMFGGYGISTSGLTLALVADLGGGEKLWLKADADTRGRFEAAGCERFTYDITRNG
ERLAHSLNYYSAPEEAMESAQLMLQWARVSLDCALKARSAKSPRARVARKTTAKPVSATSTAAATPPARPRASRPTAPPT
RPSARRKSSRG
>Mature_170_residues
ATPKDDFAIYCCELLSGVGPCVARRMFGGYGISTSGLTLALVADLGGGEKLWLKADADTRGRFEAAGCERFTYDITRNGE
RLAHSLNYYSAPEEAMESAQLMLQWARVSLDCALKARSAKSPRARVARKTTAKPVSATSTAAATPPARPRASRPTAPPTR
PSARRKSSRG

Specific function: Unknown

COG id: COG3070

COG function: function code K; Regulator of competence-specific genes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18325; Mature: 18194

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATPKDDFAIYCCELLSGVGPCVARRMFGGYGISTSGLTLALVADLGGGEKLWLKADADT
CCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEEEEECCCC
RGRFEAAGCERFTYDITRNGERLAHSLNYYSAPEEAMESAQLMLQWARVSLDCALKARSA
CCCEECCCCCEEEEEHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
KSPRARVARKTTAKPVSATSTAAATPPARPRASRPTAPPTRPSARRKSSRG
CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCC
>Mature Secondary Structure 
ATPKDDFAIYCCELLSGVGPCVARRMFGGYGISTSGLTLALVADLGGGEKLWLKADADT
CCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEEEECCCCCEEEEEECCCC
RGRFEAAGCERFTYDITRNGERLAHSLNYYSAPEEAMESAQLMLQWARVSLDCALKARSA
CCCEECCCCCEEEEEHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
KSPRARVARKTTAKPVSATSTAAATPPARPRASRPTAPPTRPSARRKSSRG
CCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA