BacMap

Definition	Polaromonas sp. JS666 chromosome, complete genome.
Accession	NC_007948
Length	5,200,264

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The map label for this gene is dbpA [H]

Identifier: 91786555

GI number: 91786555

Start: 658752

End: 660158

Strand: Direct

Name: dbpA [H]

Synonym: Bpro_0650

Alternate gene names: 91786555

Gene position: 658752-660158 (Clockwise)

Preceding gene: 91786554

Following gene: 91786556

Centisome position: 12.67

GC content: 64.89

Gene sequence:

>1407_bases
ATGACTTCTTCTTCCTCCGACTTCAGCGCCCTGTCCCTTCCGGCCCATGTGCTGGCCAATCTGCAGCAGCTGGGCTACCT
CAGCATGACGCCGATCCAGGCGGCCAGCCTGCCGGTGGCGCTGCTCGGCAAGGACCTGATTGCGCAGGCCAAAACCGGCA
GCGGCAAGACCGCGGCGTTCGGGCTCGCGCTGCTGGCCAACCTCAATGCACGCCGCTTCGCCGTGCAGGCCATGGTGCTG
TGCCCGACGCGCGAACTGGCCGACCAGGTGGCCACGGAAATCCGCCGGCTGGCGCGCGCCGAGGAAAACATCAAGGTCGT
CACGCTGTGCGGCGGCGTGCCGCTGCGCAACCAGGTGTCGAGCCTGCAGAACGGCGCACACATCGTGGTGGGCACGCCGG
GCCGCATCATGGACCACCTGGAGCGGGAGACGCTGGACGTCGACGCGCTGAACACCCTGGTGCTGGACGAAGCCGACCGC
ATGCTGGACATGGGCTTTTACAACGACATCGCCACCGTGGCCAAACAGTGCCCCGACGAGCGGCAAACCCTGCTGTTTTC
GGCCACCTACCCCGAGGGCATTGCCAAGCTCAGCCAGCAGTTCATGAAGGAGCCGCAAACCATCACCGTGCAGGCGCAGC
ACGAGAAAAGCAAAATCCGCCAGCGCTGGTATGAGGTGCCGGAGAGCGACCGCGACGAAGCGCGCCTGAACGCGGTGGCG
CTGCTGCTCAACCATTACCGCCCGGCCAGCACCCTGGCTTTTTGCAATACCAAATCGCAGTGCCGCGCGCTGGTCGCCTA
TTTGAAGAACAAGGGCTTCAGCGCGCTGGCGCTGTACGGCGAGCTCGAGCAGCGTGAGCGCGACCAGGTGCTGGTGCAGT
TTTCCAACCGCAGCTGCTCGGTGCTGGTGGCCACCGACGTGGCCGCGCGCGGCCTGGATATTTCGCAGCTGGAGATGGTG
ATCAATGTCGATGTCACGCCCGATGCCGAGGTGCACATTCACCGCATCGGCCGCACCGGCCGCGCCGATGAGGAGGGCTG
GGCCATCAGCCTGGCCAGCATGGACGAGATGGGCTCGGTCGGCAAAATCGAGCAGTTGCAGAACGCCGAATCCGAATGGC
ACAAGCTGACTGAGCTCACACCCACCAGCACCGAGCCGCTGCTGCCGCCCATGGTCACTTTGCAGATCGTCGGCGGGCGC
AAGGAGAAAATTCGCGCCGGCGATGTGCTGGGAGCGTTGACCGGGGAAGCGGGTTTTACCCGCGAGCAGGTCGGCAAGAT
CAACGTCAACGAGTTCTCGACCTATGTGGCGGTGGACCGCGCCATCGCCAGCCAGGCGCAGCAAAAACTCGCCAGTGGCC
GCGTCAAGGGCAAGAGCGTCAAGGTCCGCTTCATGGACGAGACCTGA

Upstream 100 bases:

>100_bases
ATCGCTGAGGCCACCGGCCCGTGGGGCCACAGTAGGGCCACAGTGGGGCAATAGTGAGGTTATTGAGCGGCTGGCCGGGC
CTCGCGCCGATAATCGGCGC

Downstream 100 bases:

>100_bases
AGCCCCGCGGGCAAGCTGCTCCTTACCTTGATTCCTGCCTGCTACTTTCCACTTTCCACTAGTGTGGTGCGCTCGAAGTT
CTAGAACTTATGGGGGCGCC

Product: ATP-dependent RNA helicase DbpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 468; Mature: 467

Protein sequence:

>468_residues
MTSSSSDFSALSLPAHVLANLQQLGYLSMTPIQAASLPVALLGKDLIAQAKTGSGKTAAFGLALLANLNARRFAVQAMVL
CPTRELADQVATEIRRLARAEENIKVVTLCGGVPLRNQVSSLQNGAHIVVGTPGRIMDHLERETLDVDALNTLVLDEADR
MLDMGFYNDIATVAKQCPDERQTLLFSATYPEGIAKLSQQFMKEPQTITVQAQHEKSKIRQRWYEVPESDRDEARLNAVA
LLLNHYRPASTLAFCNTKSQCRALVAYLKNKGFSALALYGELEQRERDQVLVQFSNRSCSVLVATDVAARGLDISQLEMV
INVDVTPDAEVHIHRIGRTGRADEEGWAISLASMDEMGSVGKIEQLQNAESEWHKLTELTPTSTEPLLPPMVTLQIVGGR
KEKIRAGDVLGALTGEAGFTREQVGKINVNEFSTYVAVDRAIASQAQQKLASGRVKGKSVKVRFMDET

Sequences:

>Translated_468_residues
MTSSSSDFSALSLPAHVLANLQQLGYLSMTPIQAASLPVALLGKDLIAQAKTGSGKTAAFGLALLANLNARRFAVQAMVL
CPTRELADQVATEIRRLARAEENIKVVTLCGGVPLRNQVSSLQNGAHIVVGTPGRIMDHLERETLDVDALNTLVLDEADR
MLDMGFYNDIATVAKQCPDERQTLLFSATYPEGIAKLSQQFMKEPQTITVQAQHEKSKIRQRWYEVPESDRDEARLNAVA
LLLNHYRPASTLAFCNTKSQCRALVAYLKNKGFSALALYGELEQRERDQVLVQFSNRSCSVLVATDVAARGLDISQLEMV
INVDVTPDAEVHIHRIGRTGRADEEGWAISLASMDEMGSVGKIEQLQNAESEWHKLTELTPTSTEPLLPPMVTLQIVGGR
KEKIRAGDVLGALTGEAGFTREQVGKINVNEFSTYVAVDRAIASQAQQKLASGRVKGKSVKVRFMDET
>Mature_467_residues
TSSSSDFSALSLPAHVLANLQQLGYLSMTPIQAASLPVALLGKDLIAQAKTGSGKTAAFGLALLANLNARRFAVQAMVLC
PTRELADQVATEIRRLARAEENIKVVTLCGGVPLRNQVSSLQNGAHIVVGTPGRIMDHLERETLDVDALNTLVLDEADRM
LDMGFYNDIATVAKQCPDERQTLLFSATYPEGIAKLSQQFMKEPQTITVQAQHEKSKIRQRWYEVPESDRDEARLNAVAL
LLNHYRPASTLAFCNTKSQCRALVAYLKNKGFSALALYGELEQRERDQVLVQFSNRSCSVLVATDVAARGLDISQLEMVI
NVDVTPDAEVHIHRIGRTGRADEEGWAISLASMDEMGSVGKIEQLQNAESEWHKLTELTPTSTEPLLPPMVTLQIVGGRK
EKIRAGDVLGALTGEAGFTREQVGKINVNEFSTYVAVDRAIASQAQQKLASGRVKGKSVKVRFMDET

Specific function: Has a helix-destabilizing activity, which is not coupled to the ATPase activity. Can unwind the 23S rRNA as well as 16S rRNA. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. Could play a major role in ribosome ass

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI45446747, Length=443, Percent_Identity=34.5372460496614, Blast_Score=240, Evalue=3e-63,
Organism=Homo sapiens, GI45446743, Length=443, Percent_Identity=34.5372460496614, Blast_Score=240, Evalue=3e-63,
Organism=Homo sapiens, GI20149629, Length=346, Percent_Identity=36.1271676300578, Blast_Score=226, Evalue=3e-59,
Organism=Homo sapiens, GI164664518, Length=364, Percent_Identity=31.8681318681319, Blast_Score=225, Evalue=5e-59,
Organism=Homo sapiens, GI262118318, Length=352, Percent_Identity=36.9318181818182, Blast_Score=225, Evalue=7e-59,
Organism=Homo sapiens, GI262231852, Length=352, Percent_Identity=36.9318181818182, Blast_Score=224, Evalue=1e-58,
Organism=Homo sapiens, GI216548263, Length=364, Percent_Identity=36.2637362637363, Blast_Score=224, Evalue=2e-58,
Organism=Homo sapiens, GI13518015, Length=352, Percent_Identity=36.9318181818182, Blast_Score=224, Evalue=2e-58,
Organism=Homo sapiens, GI7661920, Length=364, Percent_Identity=32.967032967033, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI31542656, Length=367, Percent_Identity=35.4223433242507, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI4758138, Length=370, Percent_Identity=34.8648648648649, Blast_Score=218, Evalue=7e-57,
Organism=Homo sapiens, GI301171467, Length=367, Percent_Identity=36.2397820163488, Blast_Score=216, Evalue=3e-56,
Organism=Homo sapiens, GI301171475, Length=367, Percent_Identity=36.2397820163488, Blast_Score=216, Evalue=3e-56,
Organism=Homo sapiens, GI87196351, Length=367, Percent_Identity=36.2397820163488, Blast_Score=216, Evalue=3e-56,
Organism=Homo sapiens, GI41327771, Length=390, Percent_Identity=33.8461538461538, Blast_Score=215, Evalue=7e-56,
Organism=Homo sapiens, GI148613856, Length=357, Percent_Identity=35.0140056022409, Blast_Score=213, Evalue=2e-55,
Organism=Homo sapiens, GI38201710, Length=357, Percent_Identity=35.0140056022409, Blast_Score=213, Evalue=2e-55,
Organism=Homo sapiens, GI169881239, Length=374, Percent_Identity=34.7593582887701, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI13514809, Length=374, Percent_Identity=34.7593582887701, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI50659095, Length=380, Percent_Identity=36.0526315789474, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI21071032, Length=358, Percent_Identity=35.7541899441341, Blast_Score=210, Evalue=3e-54,
Organism=Homo sapiens, GI224593278, Length=361, Percent_Identity=36.5650969529086, Blast_Score=209, Evalue=3e-54,
Organism=Homo sapiens, GI41327773, Length=357, Percent_Identity=34.1736694677871, Blast_Score=206, Evalue=4e-53,
Organism=Homo sapiens, GI13129006, Length=382, Percent_Identity=34.8167539267016, Blast_Score=202, Evalue=5e-52,
Organism=Homo sapiens, GI188035877, Length=352, Percent_Identity=34.375, Blast_Score=200, Evalue=3e-51,
Organism=Homo sapiens, GI4758112, Length=351, Percent_Identity=32.1937321937322, Blast_Score=195, Evalue=1e-49,
Organism=Homo sapiens, GI18375623, Length=351, Percent_Identity=32.1937321937322, Blast_Score=195, Evalue=1e-49,
Organism=Homo sapiens, GI83700235, Length=370, Percent_Identity=34.3243243243243, Blast_Score=193, Evalue=2e-49,
Organism=Homo sapiens, GI4503529, Length=368, Percent_Identity=33.695652173913, Blast_Score=193, Evalue=3e-49,
Organism=Homo sapiens, GI21040371, Length=353, Percent_Identity=30.5949008498584, Blast_Score=191, Evalue=9e-49,
Organism=Homo sapiens, GI256223453, Length=362, Percent_Identity=30.939226519337, Blast_Score=191, Evalue=1e-48,
Organism=Homo sapiens, GI51094101, Length=357, Percent_Identity=33.0532212885154, Blast_Score=189, Evalue=5e-48,
Organism=Homo sapiens, GI164419743, Length=357, Percent_Identity=33.0532212885154, Blast_Score=189, Evalue=6e-48,
Organism=Homo sapiens, GI13514831, Length=359, Percent_Identity=36.2116991643454, Blast_Score=187, Evalue=1e-47,
Organism=Homo sapiens, GI222352149, Length=349, Percent_Identity=32.9512893982808, Blast_Score=186, Evalue=5e-47,
Organism=Homo sapiens, GI41327779, Length=381, Percent_Identity=32.5459317585302, Blast_Score=183, Evalue=4e-46,
Organism=Homo sapiens, GI41327776, Length=345, Percent_Identity=32.463768115942, Blast_Score=180, Evalue=2e-45,
Organism=Homo sapiens, GI164419732, Length=359, Percent_Identity=30.6406685236769, Blast_Score=177, Evalue=2e-44,
Organism=Homo sapiens, GI9506931, Length=406, Percent_Identity=31.2807881773399, Blast_Score=177, Evalue=2e-44,
Organism=Homo sapiens, GI8922886, Length=381, Percent_Identity=32.5459317585302, Blast_Score=176, Evalue=4e-44,
Organism=Homo sapiens, GI6005743, Length=381, Percent_Identity=32.5459317585302, Blast_Score=176, Evalue=5e-44,
Organism=Homo sapiens, GI38327634, Length=378, Percent_Identity=31.2169312169312, Blast_Score=176, Evalue=5e-44,
Organism=Homo sapiens, GI62241022, Length=361, Percent_Identity=32.9639889196676, Blast_Score=171, Evalue=2e-42,
Organism=Homo sapiens, GI62241024, Length=341, Percent_Identity=33.4310850439883, Blast_Score=166, Evalue=4e-41,
Organism=Homo sapiens, GI17505907, Length=417, Percent_Identity=30.4556354916067, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI55749865, Length=370, Percent_Identity=27.2972972972973, Blast_Score=163, Evalue=3e-40,
Organism=Homo sapiens, GI4826686, Length=338, Percent_Identity=30.7692307692308, Blast_Score=144, Evalue=2e-34,
Organism=Homo sapiens, GI38569505, Length=349, Percent_Identity=27.2206303724928, Blast_Score=135, Evalue=1e-31,
Organism=Homo sapiens, GI38569503, Length=349, Percent_Identity=27.2206303724928, Blast_Score=135, Evalue=1e-31,
Organism=Homo sapiens, GI256773275, Length=422, Percent_Identity=28.1990521327014, Blast_Score=132, Evalue=1e-30,
Organism=Homo sapiens, GI20336298, Length=359, Percent_Identity=29.8050139275766, Blast_Score=127, Evalue=3e-29,
Organism=Homo sapiens, GI9966805, Length=315, Percent_Identity=32.0634920634921, Blast_Score=125, Evalue=1e-28,
Organism=Homo sapiens, GI154759257, Length=408, Percent_Identity=27.9411764705882, Blast_Score=123, Evalue=4e-28,
Organism=Escherichia coli, GI1787605, Length=459, Percent_Identity=50.9803921568627, Blast_Score=448, Evalue=1e-127,
Organism=Escherichia coli, GI87082221, Length=350, Percent_Identity=42.2857142857143, Blast_Score=271, Evalue=5e-74,
Organism=Escherichia coli, GI1787016, Length=374, Percent_Identity=38.2352941176471, Blast_Score=234, Evalue=8e-63,
Organism=Escherichia coli, GI1790214, Length=354, Percent_Identity=35.0282485875706, Blast_Score=204, Evalue=1e-53,
Organism=Escherichia coli, GI1788930, Length=372, Percent_Identity=34.9462365591398, Blast_Score=201, Evalue=8e-53,
Organism=Caenorhabditis elegans, GI71987143, Length=382, Percent_Identity=33.7696335078534, Blast_Score=231, Evalue=5e-61,
Organism=Caenorhabditis elegans, GI17555296, Length=388, Percent_Identity=35.3092783505155, Blast_Score=230, Evalue=1e-60,
Organism=Caenorhabditis elegans, GI71995724, Length=364, Percent_Identity=34.3406593406593, Blast_Score=229, Evalue=3e-60,
Organism=Caenorhabditis elegans, GI17507121, Length=364, Percent_Identity=34.3406593406593, Blast_Score=228, Evalue=4e-60,
Organism=Caenorhabditis elegans, GI32565321, Length=395, Percent_Identity=32.9113924050633, Blast_Score=215, Evalue=3e-56,
Organism=Caenorhabditis elegans, GI17552114, Length=382, Percent_Identity=31.6753926701571, Blast_Score=215, Evalue=3e-56,
Organism=Caenorhabditis elegans, GI17510307, Length=376, Percent_Identity=36.7021276595745, Blast_Score=214, Evalue=8e-56,
Organism=Caenorhabditis elegans, GI71995514, Length=365, Percent_Identity=37.2602739726027, Blast_Score=214, Evalue=9e-56,
Organism=Caenorhabditis elegans, GI17510309, Length=376, Percent_Identity=36.7021276595745, Blast_Score=214, Evalue=1e-55,
Organism=Caenorhabditis elegans, GI115533224, Length=358, Percent_Identity=37.1508379888268, Blast_Score=211, Evalue=4e-55,
Organism=Caenorhabditis elegans, GI17510559, Length=384, Percent_Identity=35.15625, Blast_Score=208, Evalue=5e-54,
Organism=Caenorhabditis elegans, GI71995718, Length=369, Percent_Identity=35.7723577235772, Blast_Score=202, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI17552642, Length=374, Percent_Identity=36.096256684492, Blast_Score=202, Evalue=3e-52,
Organism=Caenorhabditis elegans, GI17507877, Length=372, Percent_Identity=35.4838709677419, Blast_Score=200, Evalue=1e-51,
Organism=Caenorhabditis elegans, GI17507879, Length=372, Percent_Identity=35.2150537634409, Blast_Score=197, Evalue=1e-50,
Organism=Caenorhabditis elegans, GI115532546, Length=371, Percent_Identity=31.5363881401617, Blast_Score=196, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI115532548, Length=371, Percent_Identity=31.5363881401617, Blast_Score=196, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI71982858, Length=353, Percent_Identity=31.1614730878187, Blast_Score=196, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI71999646, Length=353, Percent_Identity=32.2946175637394, Blast_Score=195, Evalue=4e-50,
Organism=Caenorhabditis elegans, GI17507945, Length=375, Percent_Identity=35.7333333333333, Blast_Score=195, Evalue=5e-50,
Organism=Caenorhabditis elegans, GI71999644, Length=353, Percent_Identity=32.2946175637394, Blast_Score=194, Evalue=7e-50,
Organism=Caenorhabditis elegans, GI86570094, Length=341, Percent_Identity=36.6568914956012, Blast_Score=194, Evalue=8e-50,
Organism=Caenorhabditis elegans, GI17509811, Length=375, Percent_Identity=33.0666666666667, Blast_Score=192, Evalue=2e-49,
Organism=Caenorhabditis elegans, GI17507881, Length=371, Percent_Identity=32.8840970350404, Blast_Score=186, Evalue=2e-47,
Organism=Caenorhabditis elegans, GI193206561, Length=350, Percent_Identity=30, Blast_Score=186, Evalue=2e-47,
Organism=Caenorhabditis elegans, GI17537549, Length=374, Percent_Identity=31.5508021390374, Blast_Score=181, Evalue=1e-45,
Organism=Caenorhabditis elegans, GI17536099, Length=408, Percent_Identity=31.1274509803922, Blast_Score=179, Evalue=2e-45,
Organism=Caenorhabditis elegans, GI17536101, Length=408, Percent_Identity=31.1274509803922, Blast_Score=179, Evalue=2e-45,
Organism=Caenorhabditis elegans, GI17536103, Length=408, Percent_Identity=31.3725490196078, Blast_Score=177, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI17505370, Length=378, Percent_Identity=31.2169312169312, Blast_Score=176, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI17553716, Length=355, Percent_Identity=29.2957746478873, Blast_Score=163, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI17507641, Length=394, Percent_Identity=31.4720812182741, Blast_Score=154, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI193208216, Length=376, Percent_Identity=30.8510638297872, Blast_Score=149, Evalue=3e-36,
Organism=Caenorhabditis elegans, GI71990816, Length=371, Percent_Identity=30.7277628032345, Blast_Score=143, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI32564046, Length=366, Percent_Identity=31.4207650273224, Blast_Score=142, Evalue=4e-34,
Organism=Caenorhabditis elegans, GI17508543, Length=377, Percent_Identity=29.1777188328912, Blast_Score=137, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI25148203, Length=418, Percent_Identity=24.6411483253589, Blast_Score=132, Evalue=4e-31,
Organism=Caenorhabditis elegans, GI71982862, Length=207, Percent_Identity=33.3333333333333, Blast_Score=128, Evalue=6e-30,
Organism=Caenorhabditis elegans, GI17556951, Length=386, Percent_Identity=26.1658031088083, Blast_Score=124, Evalue=1e-28,
Organism=Caenorhabditis elegans, GI71997889, Length=403, Percent_Identity=26.5508684863524, Blast_Score=118, Evalue=8e-27,
Organism=Caenorhabditis elegans, GI25148291, Length=327, Percent_Identity=28.4403669724771, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI25148205, Length=343, Percent_Identity=23.9067055393586, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI71987152, Length=116, Percent_Identity=36.2068965517241, Blast_Score=80, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6324217, Length=361, Percent_Identity=37.9501385041551, Blast_Score=242, Evalue=1e-64,
Organism=Saccharomyces cerevisiae, GI6323021, Length=356, Percent_Identity=37.9213483146067, Blast_Score=223, Evalue=4e-59,
Organism=Saccharomyces cerevisiae, GI6325138, Length=387, Percent_Identity=36.4341085271318, Blast_Score=219, Evalue=7e-58,
Organism=Saccharomyces cerevisiae, GI6320224, Length=365, Percent_Identity=32.8767123287671, Blast_Score=216, Evalue=5e-57,
Organism=Saccharomyces cerevisiae, GI6324778, Length=366, Percent_Identity=35.5191256830601, Blast_Score=213, Evalue=4e-56,
Organism=Saccharomyces cerevisiae, GI6321856, Length=366, Percent_Identity=36.8852459016393, Blast_Score=213, Evalue=5e-56,
Organism=Saccharomyces cerevisiae, GI6320041, Length=365, Percent_Identity=31.5068493150685, Blast_Score=212, Evalue=9e-56,
Organism=Saccharomyces cerevisiae, GI6321360, Length=373, Percent_Identity=34.3163538873995, Blast_Score=209, Evalue=7e-55,
Organism=Saccharomyces cerevisiae, GI6322912, Length=366, Percent_Identity=33.0601092896175, Blast_Score=197, Evalue=4e-51,
Organism=Saccharomyces cerevisiae, GI6322323, Length=366, Percent_Identity=33.0601092896175, Blast_Score=197, Evalue=4e-51,
Organism=Saccharomyces cerevisiae, GI6320173, Length=405, Percent_Identity=30.6172839506173, Blast_Score=190, Evalue=5e-49,
Organism=Saccharomyces cerevisiae, GI6320449, Length=360, Percent_Identity=32.7777777777778, Blast_Score=185, Evalue=1e-47,
Organism=Saccharomyces cerevisiae, GI6321963, Length=386, Percent_Identity=34.9740932642487, Blast_Score=181, Evalue=2e-46,
Organism=Saccharomyces cerevisiae, GI6321111, Length=388, Percent_Identity=30.4123711340206, Blast_Score=181, Evalue=2e-46,
Organism=Saccharomyces cerevisiae, GI6319618, Length=440, Percent_Identity=29.5454545454545, Blast_Score=180, Evalue=4e-46,
Organism=Saccharomyces cerevisiae, GI6320119, Length=356, Percent_Identity=28.9325842696629, Blast_Score=178, Evalue=1e-45,
Organism=Saccharomyces cerevisiae, GI6319714, Length=366, Percent_Identity=30.0546448087432, Blast_Score=177, Evalue=3e-45,
Organism=Saccharomyces cerevisiae, GI6323947, Length=370, Percent_Identity=31.0810810810811, Blast_Score=177, Evalue=4e-45,
Organism=Saccharomyces cerevisiae, GI6322427, Length=365, Percent_Identity=30.6849315068493, Blast_Score=176, Evalue=5e-45,
Organism=Saccharomyces cerevisiae, GI6324620, Length=395, Percent_Identity=28.6075949367089, Blast_Score=174, Evalue=4e-44,
Organism=Saccharomyces cerevisiae, GI6320400, Length=382, Percent_Identity=29.3193717277487, Blast_Score=155, Evalue=1e-38,
Organism=Saccharomyces cerevisiae, GI6321267, Length=399, Percent_Identity=28.0701754385965, Blast_Score=141, Evalue=3e-34,
Organism=Saccharomyces cerevisiae, GI6323306, Length=441, Percent_Identity=26.0770975056689, Blast_Score=139, Evalue=1e-33,
Organism=Saccharomyces cerevisiae, GI6322876, Length=430, Percent_Identity=25.1162790697674, Blast_Score=114, Evalue=3e-26,
Organism=Saccharomyces cerevisiae, GI6324366, Length=362, Percent_Identity=25.9668508287293, Blast_Score=111, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24645031, Length=364, Percent_Identity=34.6153846153846, Blast_Score=226, Evalue=2e-59,
Organism=Drosophila melanogaster, GI24584399, Length=352, Percent_Identity=37.2159090909091, Blast_Score=223, Evalue=2e-58,
Organism=Drosophila melanogaster, GI28574962, Length=363, Percent_Identity=35.8126721763085, Blast_Score=222, Evalue=4e-58,
Organism=Drosophila melanogaster, GI281361218, Length=362, Percent_Identity=37.5690607734807, Blast_Score=219, Evalue=2e-57,
Organism=Drosophila melanogaster, GI24644481, Length=362, Percent_Identity=37.5690607734807, Blast_Score=219, Evalue=2e-57,
Organism=Drosophila melanogaster, GI24644483, Length=362, Percent_Identity=37.5690607734807, Blast_Score=219, Evalue=2e-57,
Organism=Drosophila melanogaster, GI24644479, Length=362, Percent_Identity=37.5690607734807, Blast_Score=219, Evalue=2e-57,
Organism=Drosophila melanogaster, GI24644487, Length=362, Percent_Identity=37.5690607734807, Blast_Score=219, Evalue=3e-57,
Organism=Drosophila melanogaster, GI45551833, Length=362, Percent_Identity=37.5690607734807, Blast_Score=219, Evalue=3e-57,
Organism=Drosophila melanogaster, GI24644485, Length=362, Percent_Identity=37.5690607734807, Blast_Score=219, Evalue=3e-57,
Organism=Drosophila melanogaster, GI18857967, Length=360, Percent_Identity=34.4444444444444, Blast_Score=219, Evalue=3e-57,
Organism=Drosophila melanogaster, GI24662330, Length=354, Percent_Identity=35.5932203389831, Blast_Score=217, Evalue=2e-56,
Organism=Drosophila melanogaster, GI24585582, Length=360, Percent_Identity=35.5555555555556, Blast_Score=216, Evalue=3e-56,
Organism=Drosophila melanogaster, GI21355075, Length=369, Percent_Identity=35.5013550135501, Blast_Score=213, Evalue=3e-55,
Organism=Drosophila melanogaster, GI17977678, Length=358, Percent_Identity=35.4748603351955, Blast_Score=207, Evalue=1e-53,
Organism=Drosophila melanogaster, GI21356161, Length=372, Percent_Identity=36.8279569892473, Blast_Score=207, Evalue=1e-53,
Organism=Drosophila melanogaster, GI24582080, Length=387, Percent_Identity=33.8501291989664, Blast_Score=205, Evalue=6e-53,
Organism=Drosophila melanogaster, GI24582078, Length=387, Percent_Identity=33.8501291989664, Blast_Score=205, Evalue=6e-53,
Organism=Drosophila melanogaster, GI17136248, Length=387, Percent_Identity=33.8501291989664, Blast_Score=205, Evalue=6e-53,
Organism=Drosophila melanogaster, GI24582075, Length=387, Percent_Identity=33.8501291989664, Blast_Score=205, Evalue=6e-53,
Organism=Drosophila melanogaster, GI24583281, Length=363, Percent_Identity=29.7520661157025, Blast_Score=204, Evalue=7e-53,
Organism=Drosophila melanogaster, GI24583279, Length=363, Percent_Identity=29.7520661157025, Blast_Score=204, Evalue=8e-53,
Organism=Drosophila melanogaster, GI24642151, Length=352, Percent_Identity=33.5227272727273, Blast_Score=199, Evalue=4e-51,
Organism=Drosophila melanogaster, GI17985987, Length=369, Percent_Identity=34.4173441734417, Blast_Score=198, Evalue=6e-51,
Organism=Drosophila melanogaster, GI17136814, Length=353, Percent_Identity=35.6940509915014, Blast_Score=198, Evalue=8e-51,
Organism=Drosophila melanogaster, GI24584994, Length=384, Percent_Identity=32.03125, Blast_Score=196, Evalue=2e-50,
Organism=Drosophila melanogaster, GI28575014, Length=353, Percent_Identity=32.5779036827195, Blast_Score=194, Evalue=2e-49,
Organism=Drosophila melanogaster, GI281365720, Length=322, Percent_Identity=35.0931677018634, Blast_Score=187, Evalue=2e-47,
Organism=Drosophila melanogaster, GI24581954, Length=354, Percent_Identity=31.0734463276836, Blast_Score=186, Evalue=4e-47,
Organism=Drosophila melanogaster, GI24581952, Length=354, Percent_Identity=31.0734463276836, Blast_Score=186, Evalue=4e-47,
Organism=Drosophila melanogaster, GI24581956, Length=354, Percent_Identity=31.0734463276836, Blast_Score=186, Evalue=4e-47,
Organism=Drosophila melanogaster, GI17647335, Length=353, Percent_Identity=31.728045325779, Blast_Score=177, Evalue=1e-44,
Organism=Drosophila melanogaster, GI28571808, Length=396, Percent_Identity=31.0606060606061, Blast_Score=171, Evalue=8e-43,
Organism=Drosophila melanogaster, GI28571809, Length=396, Percent_Identity=31.0606060606061, Blast_Score=171, Evalue=8e-43,
Organism=Drosophila melanogaster, GI21355559, Length=396, Percent_Identity=32.8282828282828, Blast_Score=162, Evalue=3e-40,
Organism=Drosophila melanogaster, GI24642822, Length=361, Percent_Identity=29.3628808864266, Blast_Score=147, Evalue=1e-35,
Organism=Drosophila melanogaster, GI24643725, Length=391, Percent_Identity=28.9002557544757, Blast_Score=147, Evalue=2e-35,
Organism=Drosophila melanogaster, GI24666101, Length=368, Percent_Identity=30.7065217391304, Blast_Score=146, Evalue=2e-35,
Organism=Drosophila melanogaster, GI24668515, Length=328, Percent_Identity=31.4024390243902, Blast_Score=138, Evalue=7e-33,
Organism=Drosophila melanogaster, GI20130173, Length=454, Percent_Identity=27.5330396475771, Blast_Score=135, Evalue=5e-32,
Organism=Drosophila melanogaster, GI19920478, Length=379, Percent_Identity=27.1767810026385, Blast_Score=121, Evalue=1e-27,
Organism=Drosophila melanogaster, GI18859659, Length=221, Percent_Identity=33.0316742081448, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI28571338, Length=221, Percent_Identity=33.0316742081448, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI17136666, Length=421, Percent_Identity=26.1282660332542, Blast_Score=103, Evalue=3e-22,
Organism=Drosophila melanogaster, GI24640164, Length=348, Percent_Identity=22.1264367816092, Blast_Score=84, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005580
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 51186; Mature: 51055

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSSSDFSALSLPAHVLANLQQLGYLSMTPIQAASLPVALLGKDLIAQAKTGSGKTAAF
CCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCHHHCCCHHHHHHHHHHHCCCCCCCHHHH
GLALLANLNARRFAVQAMVLCPTRELADQVATEIRRLARAEENIKVVTLCGGVPLRNQVS
HHHHHHCCCHHHHHEEHHEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHH
SLQNGAHIVVGTPGRIMDHLERETLDVDALNTLVLDEADRMLDMGFYNDIATVAKQCPDE
HHCCCCEEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC
RQTLLFSATYPEGIAKLSQQFMKEPQTITVQAQHEKSKIRQRWYEVPESDRDEARLNAVA
HHEEEEEECCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LLLNHYRPASTLAFCNTKSQCRALVAYLKNKGFSALALYGELEQRERDQVLVQFSNRSCS
HHHHCCCCCCCEEECCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHCCCEEEEEECCCCEE
VLVATDVAARGLDISQLEMVINVDVTPDAEVHIHRIGRTGRADEEGWAISLASMDEMGSV
EEEEECHHHCCCCHHHEEEEEEEECCCCCCEEEEECCCCCCCCCCCCEEEEECHHHCCCC
GKIEQLQNAESEWHKLTELTPTSTEPLLPPMVTLQIVGGRKEKIRAGDVLGALTGEAGFT
CHHHHHHCHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHCCHHEECCCCCCCC
REQVGKINVNEFSTYVAVDRAIASQAQQKLASGRVKGKSVKVRFMDET
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC
>Mature Secondary Structure 
TSSSSDFSALSLPAHVLANLQQLGYLSMTPIQAASLPVALLGKDLIAQAKTGSGKTAAF
CCCCCCCCHHHHHHHHHHHHHHCCCEEECCCHHHCCCHHHHHHHHHHHCCCCCCCHHHH
GLALLANLNARRFAVQAMVLCPTRELADQVATEIRRLARAEENIKVVTLCGGVPLRNQVS
HHHHHHCCCHHHHHEEHHEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHH
SLQNGAHIVVGTPGRIMDHLERETLDVDALNTLVLDEADRMLDMGFYNDIATVAKQCPDE
HHCCCCEEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCC
RQTLLFSATYPEGIAKLSQQFMKEPQTITVQAQHEKSKIRQRWYEVPESDRDEARLNAVA
HHEEEEEECCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LLLNHYRPASTLAFCNTKSQCRALVAYLKNKGFSALALYGELEQRERDQVLVQFSNRSCS
HHHHCCCCCCCEEECCCHHHHHHHHHHHHCCCCEEEEEHHHHHHHCCCEEEEEECCCCEE
VLVATDVAARGLDISQLEMVINVDVTPDAEVHIHRIGRTGRADEEGWAISLASMDEMGSV
EEEEECHHHCCCCHHHEEEEEEEECCCCCCEEEEECCCCCCCCCCCCEEEEECHHHCCCC
GKIEQLQNAESEWHKLTELTPTSTEPLLPPMVTLQIVGGRKEKIRAGDVLGALTGEAGFT
CHHHHHHCHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHCCHHEECCCCCCCC
REQVGKINVNEFSTYVAVDRAIASQAQQKLASGRVKGKSVKVRFMDET
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2216714; 8253085; 9097039; 9278503; 9016593; 11350034 [H]