| Definition | Polaromonas sp. JS666 chromosome, complete genome. |
|---|---|
| Accession | NC_007948 |
| Length | 5,200,264 |
Click here to switch to the map view.
The map label for this gene is 91786543
Identifier: 91786543
GI number: 91786543
Start: 645955
End: 646947
Strand: Direct
Name: 91786543
Synonym: Bpro_0638
Alternate gene names: NA
Gene position: 645955-646947 (Clockwise)
Preceding gene: 91786542
Following gene: 91786544
Centisome position: 12.42
GC content: 63.34
Gene sequence:
>993_bases ATGATGAGCCCTTCAATTTCCCGGCGTATGCTGTTGCAGGTCGCTGGCCTTGGCGCCTCGGCGCTGGCCTTGCCGCATGC ACTGGGGCAGTCGACATGGCCGTCGCGGCCGGTTCGCTTTGTGGTGCCGTTTGCACCGGGGGGCACCTCCGAAATCGTCG CGCGCTCGGTGGCCGCCGAGCTCAGCAAGCAGCTTGGGCAAAGTGTCTATGTCGAAAACAAGCCGGGCGGGGCGGGCACG GTGGCGATGCAGGAGGTGGCCAAGTCCCCGGCCGACGGGCACACCATCATCCTCGGGCATGTGGGCACGCTGGCCGTCAA TCCCTACATGCTGAAAAACCAGCCCTATGACGTGAACAAGGATTTCATTCCGGTGACCCTGCTGGCCAAGGTGCCCAATG TCTTTGTGATCCACCCGGATGTACCGGCCAAGAATTTCCAGGAGTTTGTCGCCTATGTGAAGAAAAACCCGGGCCAACTC AACTATGGCTCGGCCGGCAATGCCAGCGCCGGGCATCTGGCCATGGAGTATCTGAAGCTGGTCACCGGCATGTTCATCAC GCACATTCCTTACCGCGGCACCGGCCCGCAGCTGACCGATCTGATTTCGGGCCGTACCCAGGCCTCGTCAGCCGGCCTGC CGGCCCTGAGCGCGCACATCAAGAGCGGCAAATTGCGCGCTATCGCGGTGGGCACCGCGCAGCGTATTTCCGGCCTGCCC GATGTGCCCACCGTGGCCGAGATGGGCTTCAAGAACTTTGAGACCTCGCAGTGGTACGGCATTCTGGCGCCGGCCGGCAC GCCCGCGGACGTCGTCAGGCATCTGCAGGAAGAGTCGCTGAAGGCGCTCAAGTCCTCGGCCGTCACCGCCCGCTTCGCCA CCGACAATGCGGTCGGCGGCGGCGGGCCGTCCAGCGAATTTGCCGCGTTTATCGCGAGCGAACAAAAGATCTGGAGCGAT ATCGTCAAGCGCGCCGGCATCCATGCTGATTAA
Upstream 100 bases:
>100_bases CGCCGGCGCTCCCGGCGTCACGGGTGCCCCAGGTGTCACAGGCGTCATTTCCTGATGACGTTCGCCGCGCTTCAGCTTCA ATTACTACAAGGAGACCGTC
Downstream 100 bases:
>100_bases ACGTCAAAGGGAGTCGCAAGAGACGCTGGATGTCCTGGTGATTGGCGGGGGCAATGCCGCGCTGTGCGCCGCGTTGATGG CGCGGGAGGCCGGCGCCAGC
Product: twin-arginine translocation pathway signal protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MMSPSISRRMLLQVAGLGASALALPHALGQSTWPSRPVRFVVPFAPGGTSEIVARSVAAELSKQLGQSVYVENKPGGAGT VAMQEVAKSPADGHTIILGHVGTLAVNPYMLKNQPYDVNKDFIPVTLLAKVPNVFVIHPDVPAKNFQEFVAYVKKNPGQL NYGSAGNASAGHLAMEYLKLVTGMFITHIPYRGTGPQLTDLISGRTQASSAGLPALSAHIKSGKLRAIAVGTAQRISGLP DVPTVAEMGFKNFETSQWYGILAPAGTPADVVRHLQEESLKALKSSAVTARFATDNAVGGGGPSSEFAAFIASEQKIWSD IVKRAGIHAD
Sequences:
>Translated_330_residues MMSPSISRRMLLQVAGLGASALALPHALGQSTWPSRPVRFVVPFAPGGTSEIVARSVAAELSKQLGQSVYVENKPGGAGT VAMQEVAKSPADGHTIILGHVGTLAVNPYMLKNQPYDVNKDFIPVTLLAKVPNVFVIHPDVPAKNFQEFVAYVKKNPGQL NYGSAGNASAGHLAMEYLKLVTGMFITHIPYRGTGPQLTDLISGRTQASSAGLPALSAHIKSGKLRAIAVGTAQRISGLP DVPTVAEMGFKNFETSQWYGILAPAGTPADVVRHLQEESLKALKSSAVTARFATDNAVGGGGPSSEFAAFIASEQKIWSD IVKRAGIHAD >Mature_330_residues MMSPSISRRMLLQVAGLGASALALPHALGQSTWPSRPVRFVVPFAPGGTSEIVARSVAAELSKQLGQSVYVENKPGGAGT VAMQEVAKSPADGHTIILGHVGTLAVNPYMLKNQPYDVNKDFIPVTLLAKVPNVFVIHPDVPAKNFQEFVAYVKKNPGQL NYGSAGNASAGHLAMEYLKLVTGMFITHIPYRGTGPQLTDLISGRTQASSAGLPALSAHIKSGKLRAIAVGTAQRISGLP DVPTVAEMGFKNFETSQWYGILAPAGTPADVVRHLQEESLKALKSSAVTARFATDNAVGGGGPSSEFAAFIASEQKIWSD IVKRAGIHAD
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34703; Mature: 34703
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSPSISRRMLLQVAGLGASALALPHALGQSTWPSRPVRFVVPFAPGGTSEIVARSVAAE CCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHH LSKQLGQSVYVENKPGGAGTVAMQEVAKSPADGHTIILGHVGTLAVNPYMLKNQPYDVNK HHHHCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCEECCEEECCCCCCCCC DFIPVTLLAKVPNVFVIHPDVPAKNFQEFVAYVKKNPGQLNYGSAGNASAGHLAMEYLKL CCEEEEHEECCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH VTGMFITHIPYRGTGPQLTDLISGRTQASSAGLPALSAHIKSGKLRAIAVGTAQRISGLP HHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHCCCCEEEEEECCHHHHCCCC DVPTVAEMGFKNFETSQWYGILAPAGTPADVVRHLQEESLKALKSSAVTARFATDNAVGG CCCHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCC GGPSSEFAAFIASEQKIWSDIVKRAGIHAD CCCHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MMSPSISRRMLLQVAGLGASALALPHALGQSTWPSRPVRFVVPFAPGGTSEIVARSVAAE CCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHH LSKQLGQSVYVENKPGGAGTVAMQEVAKSPADGHTIILGHVGTLAVNPYMLKNQPYDVNK HHHHCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCEECCEEECCCCCCCCC DFIPVTLLAKVPNVFVIHPDVPAKNFQEFVAYVKKNPGQLNYGSAGNASAGHLAMEYLKL CCEEEEHEECCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH VTGMFITHIPYRGTGPQLTDLISGRTQASSAGLPALSAHIKSGKLRAIAVGTAQRISGLP HHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCHHHHHHCCCCEEEEEECCHHHHCCCC DVPTVAEMGFKNFETSQWYGILAPAGTPADVVRHLQEESLKALKSSAVTARFATDNAVGG CCCHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCC GGPSSEFAAFIASEQKIWSDIVKRAGIHAD CCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3299368 [H]