Definition Polaromonas sp. JS666 chromosome, complete genome.
Accession NC_007948
Length 5,200,264

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The map label for this gene is 91786525

Identifier: 91786525

GI number: 91786525

Start: 628105

End: 629073

Strand: Reverse

Name: 91786525

Synonym: Bpro_0620

Alternate gene names: NA

Gene position: 629073-628105 (Counterclockwise)

Preceding gene: 91786526

Following gene: 91786524

Centisome position: 12.1

GC content: 67.6

Gene sequence:

>969_bases
ATGAAACGTCGGTCGCTGCTGCTCGCCAGCCTTCTCATGTCTGCAGCCGGGTGGTGCGCGGCGCAGGGTGCCTGGCCCGC
CAAACCCATCACCATGATCGTGCCCTTCCCGCCTGGCGGTCTGGCCGACCTGGTGGCGCGGCCTGTGGCTGAAGCGATGT
CGCGGGAGCTGGGGCAGCCGGTGGTGATCGAGAACAAGGCCGGCGCCGGCGGCGGCATTGGCATGGGCATGGCCGCCAAG
GCCAAACCCGATGGCTACACCGTCCTGCTGGCGCTGTCGTCGCTGACCGTCATCCCCGAAGCCGATACCCTGCTGGGTCG
GCCCGCCATGTTTGCCCTGCCCGACCTGCGGCCGATTGCCCGCTTCACGGCCGACCCCACGGTACTGGCCGTGCGTGCCG
ATGCGCCCTGGAAAACCGCGCAGCAGTTCATTGACGATGCCAAAAAACGCCCCGGCGCCATCAACTACGGCTCCTCGGGC
AACTACGGCACCATGCATGTGCCGATGGAAATCCTGGCGCAAACGGCCGGCATAAAAATGACGCACGTGCCGTTTACCGG
CGCCGGCCCGGCCGTGGTGGCGCTGCTGGGCGGCCAGATTGATGCGGTGTCATCCGGGCCCGCCACCGTGCTGCAGCAGG
TCAAGGCCGGCAAGCTGCGCGTGCTGGCGCATTGGGGCAACGGCGCGCTGAGCACGCTGCCCGAGGTACCCAGCCTGAAG
GACGCCGGCTTCAACGCCGAGTATGCGCAGTGGTCGGGGCTGTTCATCCCGCAGGCCACGCCGGAGCCGATTGCCCAGCG
CCTGCGCGCCGCGGCGAAGGCCGCCGCACAGGACGCCCGCGTCAAGGAAGTGATTCTGGGTGCGGGCAGCCCGGTGCTGT
ACCAGGACAGCCCGGACTTCGAAATGTATGTAAAGGAAGATGCCAAGCGCATGGCGGAGGTCGTCAAGCGCATCGGCAAG
GTGGAATAG

Upstream 100 bases:

>100_bases
CTAGGGATTGCGATGAGGCCAAAACCGCGGTCAGACGTTAGCATGCTTCCATTAGCCCCTCCGAATCCGTCGGAGCTTGC
CGCTCTACAAGGAACATTGC

Downstream 100 bases:

>100_bases
AGCTACCCTGCCCCTGCTTTCTCCGTCTCACTGTTCACTGTTCACTTTTCACCTCGCCCCCGCCCCGCCATTCCCGGCCC
TGTTTTCCCACTGGAGAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: ORF5 [H]

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MKRRSLLLASLLMSAAGWCAAQGAWPAKPITMIVPFPPGGLADLVARPVAEAMSRELGQPVVIENKAGAGGGIGMGMAAK
AKPDGYTVLLALSSLTVIPEADTLLGRPAMFALPDLRPIARFTADPTVLAVRADAPWKTAQQFIDDAKKRPGAINYGSSG
NYGTMHVPMEILAQTAGIKMTHVPFTGAGPAVVALLGGQIDAVSSGPATVLQQVKAGKLRVLAHWGNGALSTLPEVPSLK
DAGFNAEYAQWSGLFIPQATPEPIAQRLRAAAKAAAQDARVKEVILGAGSPVLYQDSPDFEMYVKEDAKRMAEVVKRIGK
VE

Sequences:

>Translated_322_residues
MKRRSLLLASLLMSAAGWCAAQGAWPAKPITMIVPFPPGGLADLVARPVAEAMSRELGQPVVIENKAGAGGGIGMGMAAK
AKPDGYTVLLALSSLTVIPEADTLLGRPAMFALPDLRPIARFTADPTVLAVRADAPWKTAQQFIDDAKKRPGAINYGSSG
NYGTMHVPMEILAQTAGIKMTHVPFTGAGPAVVALLGGQIDAVSSGPATVLQQVKAGKLRVLAHWGNGALSTLPEVPSLK
DAGFNAEYAQWSGLFIPQATPEPIAQRLRAAAKAAAQDARVKEVILGAGSPVLYQDSPDFEMYVKEDAKRMAEVVKRIGK
VE
>Mature_322_residues
MKRRSLLLASLLMSAAGWCAAQGAWPAKPITMIVPFPPGGLADLVARPVAEAMSRELGQPVVIENKAGAGGGIGMGMAAK
AKPDGYTVLLALSSLTVIPEADTLLGRPAMFALPDLRPIARFTADPTVLAVRADAPWKTAQQFIDDAKKRPGAINYGSSG
NYGTMHVPMEILAQTAGIKMTHVPFTGAGPAVVALLGGQIDAVSSGPATVLQQVKAGKLRVLAHWGNGALSTLPEVPSLK
DAGFNAEYAQWSGLFIPQATPEPIAQRLRAAAKAAAQDARVKEVILGAGSPVLYQDSPDFEMYVKEDAKRMAEVVKRIGK
VE

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 33724; Mature: 33724

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRSLLLASLLMSAAGWCAAQGAWPAKPITMIVPFPPGGLADLVARPVAEAMSRELGQP
CCHHHHHHHHHHHHHCCCHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCC
VVIENKAGAGGGIGMGMAAKAKPDGYTVLLALSSLTVIPEADTLLGRPAMFALPDLRPIA
EEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEECCCCHHHHCCCHHEECCCCHHHH
RFTADPTVLAVRADAPWKTAQQFIDDAKKRPGAINYGSSGNYGTMHVPMEILAQTAGIKM
HHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEECCCCCCCCEEECCHHHHHHHCCCEE
THVPFTGAGPAVVALLGGQIDAVSSGPATVLQQVKAGKLRVLAHWGNGALSTLPEVPSLK
EECCCCCCCHHHHHHHCCCEECCCCCHHHHHHHHCCCCEEEEEEECCCHHHHCCCCCCCC
DAGFNAEYAQWSGLFIPQATPEPIAQRLRAAAKAAAQDARVKEVILGAGSPVLYQDSPDF
CCCCCCCHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCH
EMYVKEDAKRMAEVVKRIGKVE
HHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKRRSLLLASLLMSAAGWCAAQGAWPAKPITMIVPFPPGGLADLVARPVAEAMSRELGQP
CCHHHHHHHHHHHHHCCCHHCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCC
VVIENKAGAGGGIGMGMAAKAKPDGYTVLLALSSLTVIPEADTLLGRPAMFALPDLRPIA
EEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCEEECCCCHHHHCCCHHEECCCCHHHH
RFTADPTVLAVRADAPWKTAQQFIDDAKKRPGAINYGSSGNYGTMHVPMEILAQTAGIKM
HHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEECCCCCCCCEEECCHHHHHHHCCCEE
THVPFTGAGPAVVALLGGQIDAVSSGPATVLQQVKAGKLRVLAHWGNGALSTLPEVPSLK
EECCCCCCCHHHHHHHCCCEECCCCCHHHHHHHHCCCCEEEEEEECCCHHHHCCCCCCCC
DAGFNAEYAQWSGLFIPQATPEPIAQRLRAAAKAAAQDARVKEVILGAGSPVLYQDSPDF
CCCCCCCHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCH
EMYVKEDAKRMAEVVKRIGKVE
HHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9583950; 12910271 [H]