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The map label for this gene is yfdE [H]

Identifier: 91786488

GI number: 91786488

Start: 586183

End: 587373

Strand: Reverse

Name: yfdE [H]

Synonym: Bpro_0582

Alternate gene names: 91786488

Gene position: 587373-586183 (Counterclockwise)

Preceding gene: 91786489

Following gene: 91786487

Centisome position: 11.3

GC content: 67.34

Gene sequence:

>1191_bases
ATGACCCGACCGCTTGACGGCATCACTGTCGTTTCCCTCGAACACGCGATCGCCGCGCCGTTCTGCACCCGCCAGCTGGC
CGACCTCGGCGCCCGCGTGATCAAGATCGAGCGCCCCGGCGTGGGCGACTTTGCGCGCGCCTACGACCAGCGCGTGCGCG
GCCAGGCCTCGCACTTTGTTTGGACCAACCGCTCCAAGGAAAGCCTCACACTCGACCTGAAGCAGCCCGCGGCGCTGGCC
GTGCTGAAGGCATTGCTGGCCAAGGCCGACGTGCTGGTGCAAAACCTCGCGCCCGGCGCCACCGCGCGCATGGGGCTGGG
CTATGAAGCGCTCCGCCAGGACCATCCCGGCCTGATCGTCTGCGACATCTCGGGCTACGGCGAAGACGGCCCCTACCGCG
ACAAGAAGGCCTACGACCTGCTGATCCAGAGCGAGGCCGGCCTGCTGTCGATCACCGGCACGGCCGAAGAGCCCTCCAAG
GCCGGCAACTCGATGGCCGACATCGCCGCCGGCATGTACGCCTACACCAGCGTGCTGGCGGCGCTGCTGCTGCGCGATAA
ACGGGGTGGGACCGGCAAAGGCTCGCACATCGACGTGTCCATGCTCGAATCGCTGGCCGAATGGATGGGTTACCCGCTGT
ATTACGCATTTGAAGGCGCCCCGCCGCCGCCGCGCACCGCCGCCTCGCATGCCAGCATCTACCCCTATGGCCCGTTCCAG
GCCGGTGACGGCGGCACGGTGATGCTGGGCCTGCAAAACGAACGCGAATGGAAAGTCTTTTGCGAGGTCGTGCTGCGAAA
TGCCCCCCTGGCCACCGACCCGCGCTTTGACAGCAACGCCCGTCGCAACGAAAACCGCGATGCGCTCAAGGCCATCATCC
TGGCCACCTTTGCCCAGCTCGGCACCGCCCAGGTCGTGGCACGGCTGGACGAAGCGCAGATTGCCAATGCCCGCATGAAC
AGCATGGCCGAGGTCTGGGCGCACCCGCAGCTCAAGGCGCGCGAGCGCTGGCAAAACGTGGGTTCACCGGCGGGTGACAT
TCCGGCGCTGCTGCCGCCGGGCCGCAACAGCAGCTTTGACTACCGCATGGACGCCATCCCCGCCGTCGGCCAGCACACCG
ACACCATCCTGCGCGAGCTGGGTCGTGACGAGGCCGCCATCGCCCAACTGTACGCGGCCCAGGCCGTTTAA

Upstream 100 bases:

>100_bases
GCTGTACCAGGTGGCGCCGATCTCGACCAACCTGATCCTGAGCTACGTGGCCGAGCACCTGCTGGGCCTGCCCCGCTCCT
TCTGATTTCCGGAGGCCTCC

Downstream 100 bases:

>100_bases
CCCTATGGGCCTTGTACCGATTGCATTCACAAGGATGACCCGATGAGTTCTCCCACCGCCCAGCTGGCCGCGTTTGCCGC
CAGCCTGACTTTCGAGGCCA

Product: L-carnitine dehydratase/bile acid-inducible protein F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 395

Protein sequence:

>396_residues
MTRPLDGITVVSLEHAIAAPFCTRQLADLGARVIKIERPGVGDFARAYDQRVRGQASHFVWTNRSKESLTLDLKQPAALA
VLKALLAKADVLVQNLAPGATARMGLGYEALRQDHPGLIVCDISGYGEDGPYRDKKAYDLLIQSEAGLLSITGTAEEPSK
AGNSMADIAAGMYAYTSVLAALLLRDKRGGTGKGSHIDVSMLESLAEWMGYPLYYAFEGAPPPPRTAASHASIYPYGPFQ
AGDGGTVMLGLQNEREWKVFCEVVLRNAPLATDPRFDSNARRNENRDALKAIILATFAQLGTAQVVARLDEAQIANARMN
SMAEVWAHPQLKARERWQNVGSPAGDIPALLPPGRNSSFDYRMDAIPAVGQHTDTILRELGRDEAAIAQLYAAQAV

Sequences:

>Translated_396_residues
MTRPLDGITVVSLEHAIAAPFCTRQLADLGARVIKIERPGVGDFARAYDQRVRGQASHFVWTNRSKESLTLDLKQPAALA
VLKALLAKADVLVQNLAPGATARMGLGYEALRQDHPGLIVCDISGYGEDGPYRDKKAYDLLIQSEAGLLSITGTAEEPSK
AGNSMADIAAGMYAYTSVLAALLLRDKRGGTGKGSHIDVSMLESLAEWMGYPLYYAFEGAPPPPRTAASHASIYPYGPFQ
AGDGGTVMLGLQNEREWKVFCEVVLRNAPLATDPRFDSNARRNENRDALKAIILATFAQLGTAQVVARLDEAQIANARMN
SMAEVWAHPQLKARERWQNVGSPAGDIPALLPPGRNSSFDYRMDAIPAVGQHTDTILRELGRDEAAIAQLYAAQAV
>Mature_395_residues
TRPLDGITVVSLEHAIAAPFCTRQLADLGARVIKIERPGVGDFARAYDQRVRGQASHFVWTNRSKESLTLDLKQPAALAV
LKALLAKADVLVQNLAPGATARMGLGYEALRQDHPGLIVCDISGYGEDGPYRDKKAYDLLIQSEAGLLSITGTAEEPSKA
GNSMADIAAGMYAYTSVLAALLLRDKRGGTGKGSHIDVSMLESLAEWMGYPLYYAFEGAPPPPRTAASHASIYPYGPFQA
GDGGTVMLGLQNEREWKVFCEVVLRNAPLATDPRFDSNARRNENRDALKAIILATFAQLGTAQVVARLDEAQIANARMNS
MAEVWAHPQLKARERWQNVGSPAGDIPALLPPGRNSSFDYRMDAIPAVGQHTDTILRELGRDEAAIAQLYAAQAV

Specific function: Unknown

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=399, Percent_Identity=33.0827067669173, Blast_Score=220, Evalue=2e-57,
Organism=Homo sapiens, GI300863124, Length=425, Percent_Identity=31.5294117647059, Blast_Score=210, Evalue=2e-54,
Organism=Homo sapiens, GI300863126, Length=398, Percent_Identity=29.6482412060301, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI13376042, Length=425, Percent_Identity=27.7647058823529, Blast_Score=161, Evalue=9e-40,
Organism=Homo sapiens, GI266456254, Length=400, Percent_Identity=28.75, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI42794625, Length=400, Percent_Identity=28.75, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI266458393, Length=204, Percent_Identity=36.7647058823529, Blast_Score=112, Evalue=4e-25,
Organism=Homo sapiens, GI266458397, Length=204, Percent_Identity=36.7647058823529, Blast_Score=112, Evalue=4e-25,
Organism=Homo sapiens, GI266458395, Length=136, Percent_Identity=38.2352941176471, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI42822893, Length=136, Percent_Identity=38.2352941176471, Blast_Score=91, Evalue=3e-18,
Organism=Escherichia coli, GI87082093, Length=339, Percent_Identity=32.1533923303835, Blast_Score=199, Evalue=2e-52,
Organism=Escherichia coli, GI1788717, Length=421, Percent_Identity=29.2161520190024, Blast_Score=142, Evalue=4e-35,
Organism=Escherichia coli, GI1786222, Length=400, Percent_Identity=27.25, Blast_Score=105, Evalue=6e-24,
Organism=Caenorhabditis elegans, GI32564160, Length=218, Percent_Identity=33.0275229357798, Blast_Score=99, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI115535051, Length=278, Percent_Identity=29.136690647482, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24648431, Length=393, Percent_Identity=34.8600508905852, Blast_Score=198, Evalue=4e-51,
Organism=Drosophila melanogaster, GI24585488, Length=211, Percent_Identity=29.3838862559242, Blast_Score=86, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: NA

Molecular weight: Translated: 42770; Mature: 42639

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRPLDGITVVSLEHAIAAPFCTRQLADLGARVIKIERPGVGDFARAYDQRVRGQASHFV
CCCCCCCEEEEEEHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEE
WTNRSKESLTLDLKQPAALAVLKALLAKADVLVQNLAPGATARMGLGYEALRQDHPGLIV
EECCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHCCCCCEEE
CDISGYGEDGPYRDKKAYDLLIQSEAGLLSITGTAEEPSKAGNSMADIAAGMYAYTSVLA
EECCCCCCCCCCCCCHHHEEEEECCCCEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHHH
ALLLRDKRGGTGKGSHIDVSMLESLAEWMGYPLYYAFEGAPPPPRTAASHASIYPYGPFQ
HHHHHCCCCCCCCCCEEEHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
AGDGGTVMLGLQNEREWKVFCEVVLRNAPLATDPRFDSNARRNENRDALKAIILATFAQL
CCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
GTAQVVARLDEAQIANARMNSMAEVWAHPQLKARERWQNVGSPAGDIPALLPPGRNSSFD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
YRMDAIPAVGQHTDTILRELGRDEAAIAQLYAAQAV
EECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TRPLDGITVVSLEHAIAAPFCTRQLADLGARVIKIERPGVGDFARAYDQRVRGQASHFV
CCCCCCEEEEEEHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEE
WTNRSKESLTLDLKQPAALAVLKALLAKADVLVQNLAPGATARMGLGYEALRQDHPGLIV
EECCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHCCCCCEEE
CDISGYGEDGPYRDKKAYDLLIQSEAGLLSITGTAEEPSKAGNSMADIAAGMYAYTSVLA
EECCCCCCCCCCCCCHHHEEEEECCCCEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHHH
ALLLRDKRGGTGKGSHIDVSMLESLAEWMGYPLYYAFEGAPPPPRTAASHASIYPYGPFQ
HHHHHCCCCCCCCCCEEEHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
AGDGGTVMLGLQNEREWKVFCEVVLRNAPLATDPRFDSNARRNENRDALKAIILATFAQL
CCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
GTAQVVARLDEAQIANARMNSMAEVWAHPQLKARERWQNVGSPAGDIPALLPPGRNSSFD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
YRMDAIPAVGQHTDTILRELGRDEAAIAQLYAAQAV
EECCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 8125343 [H]